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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR239 IGR237 IGR241 IGR236 IGR240 IGR234 IGR235 SMu0266 SMu0265 SMu0264 SMu0267 SMu0263 SMu0261 tkt,tktA, - SMu0262 polI,polA, - SMu0268 SMu0266 SMu0265 SMu0264 SMu0267 SMu0263 SMu0261 tkt,tktA, - SMu0262 polI,polA, - SMu0268 SMu0266 SMu0264 SMu0267 SMu0263 SMu0261 tkt,tktA, - SMu0262 polI,polA, - SMu0268 SMu0265


LANL Gene ID: SMu0264

GenBank Locus Tag: SMU.293

DNA Molecule Name:
1  

GenBank ID:
24378796

Gene Name:


Definition:
hypothetical protein

Cellular Location:
Membrane, Cytoplasm [Evidence]

Gene Start:
281529

Gene Stop:
282041

Gene Length:
513

Molecular Weight*:
19192

pI*:
7.70

Net Charge*:
1.82

EC:
 

Functional Class:
Hypothetical  

Gene Ontology:

Pathway: pathway table

Comment:


View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
No significant matches in gapped BLAST.





SMu0264 has no significant similarity (BLAST p-value < 1e-3) to Streptococcus agalactiae


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24378796|ref|NP_720751.1|  hypothetical protein SMU.293 [...   283   2e-75
 gi|125717567|ref|YP_001034700.1|  hypothetical protein SSA_0...   130   2e-29
 gi|157076435|gb|ABV11118.1|  conserved hypothetical protein ...   119   7e-26
 gi|34540743|ref|NP_905222.1|  hypothetical protein PG0999 [P...    68   2e-10
 gi|28378380|ref|NP_785272.1|  integral membrane protein [Lac...    66   7e-10
 gi|148322830|gb|EDK88080.1|  hypothetical protein FNP_0265 [...    59   1e-07
 gi|126699260|ref|YP_001088157.1|  hypothetical protein CD165...    55   2e-06
 gi|150017236|ref|YP_001309490.1|  membrane protein; CF-9 fam...    54   4e-06


InterPro Summary:  InterProScan

noIPR
unintegrated
unintegrated
signalp [1-85]? NA signalp signal-peptide signal-peptide
tmhmm [5-25]? NA tmhmm transmembrane_regions[64-86]? NA tmhmm transmembrane_regions[107-129]? NA tmhmm transmembrane_regions[135-155]? NA tmhmm transmembrane_regions transmembrane_regions


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
No significant hits to the ProDom database.

Paralogs:  Local Blast Search
SMu0264 is paralogously related (blast p-value < 1e-3) to SMu0035, and SMu0564, both conserved hypotheticals.


Pfam Summary:  Pfam Search
No significant hits to the Pfam 11.0 database

 Structural Feature(s):
Feature Type  Start  Stop
uncleavable  
1  
14
transmembrane  
3  
19
transmembrane  
56  
72
transmembrane  
73  
89
transmembrane  
114  
130
transmembrane  
136  
152

Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MTAALFAFIAITLFMIHEFEEIILVCPWIAKNKSNPKFANEIFISGRKHY
PSAENIAVAVLEEFVLASLILLAGILFRVPELVLAITLGHTFHLFSHISQ
AITYRTWVPGSITAALTLPLLVMAIMGFCFAQTLSWMLLLMLTVLIFPLQ
LVNLRFIHQHTDKVEKFLHS

Gene Nucleotide Sequence:  Sequence Viewer
ATGACAGCAGCACTATTCGCTTTTATCGCTATAACGCTTTTTATGATACA
CGAGTTTGAAGAAATAATTTTAGTTTGTCCATGGATTGCTAAGAACAAGA
GCAATCCCAAATTTGCCAATGAGATATTTATCTCAGGCAGAAAGCATTAC
CCTTCAGCAGAAAATATTGCAGTGGCTGTCTTAGAAGAGTTTGTTTTAGC
TAGTCTGATTCTGCTTGCAGGCATTCTTTTTAGAGTACCAGAGTTGGTAT
TAGCTATCACATTGGGACATACTTTCCATCTTTTTTCTCATATTTCTCAA
GCCATTACCTATCGTACATGGGTACCCGGAAGTATCACTGCAGCATTAAC
TCTTCCTTTACTGGTTATGGCTATCATGGGATTTTGTTTTGCTCAGACAC
TTAGCTGGATGCTTTTATTGATGCTGACAGTCCTTATATTCCCTCTTCAG
TTGGTTAATCTACGCTTTATTCATCAGCATACTGACAAAGTCGAAAAATT
CCTGCATTCGTAA

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