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Streptococcus mutans Search Results

Record: 1 of 1  
MiniMap IGR61 IGR59 IGR60 IGR55 IGR56 IGR58 IGR57 IGR62 SMu0062 SMu0065 ampD, - SMu0069 dacF, - SMu0068 SMu0066 SMu0064 thrC, - SMu0063 SMu0061 fruA, - SMu0070 SMu0062 SMu0065 ampD, - SMu0069 dacF, - SMu0068 SMu0066 SMu0064 thrC, - SMu0063 SMu0061 fruA, - SMu0070 SMu0065 ampD, - SMu0069 dacF, - SMu0068 SMu0066 SMu0064 thrC, - SMu0063 SMu0061 fruA, - SMu0070 pgm,gmp, - SMu0067 pgm,gmp, - SMu0067 SMu0062


LANL Gene ID: SMu0065

GenBank Locus Tag: SMU.72

DNA Molecule Name:
1  

GenBank ID:
161486825

Gene Name:


Definition:
conserved hypothetical protein

Cellular Location:
Cytoplasm [Evidence]

Gene Start:
73219

Gene Stop:
73497

Gene Length:
279

Molecular Weight*:
10080

pI*:
4.30

Net Charge*:
-5.77

EC:
 

Functional Class:
Unknown  

Gene Ontology:
Biological process
  GO:0008152    metabolic process

Molecular function
  GO:0016597    amino acid binding


Pathway: pathway table

Comment:



View in HOMD Genome Viewer

Blast Summary:  PSI-Blast Search
Several matches in gapped BLAST to conserved hypotheetical proteins. Residues 5-92 are 84% similar to 15902261 of S.pneumoniae.





The best hit to the Streptococcus agalactiae 2603 V/R genome is to SAG1566 (3e-06).


Top Blast Hits:  Updated monthly
Click here to view the entire PsiBlast results.
 gi|24378597|ref|NP_720552.1|  hypothetical protein SMU.72 [S...   153   3e-36
 gi|30173428|sp|Q8DWH8|Y072_STRMU  UPF0237 protein SMU_72          148   8e-35
 gi|15902261|ref|NP_357811.1|  hypothetical protein spr0217 [...   136   4e-31
 gi|157076423|gb|ABV11106.1|  possible phosphoserine phosphat...   132   7e-30
 gi|55820210|ref|YP_138652.1|  hypothetical protein stu0112 [...   130   2e-29
 gi|15900174|ref|NP_344778.1|  hypothetical protein SP_0238 [...   130   3e-29
 gi|55822102|ref|YP_140543.1|  hypothetical protein str0112 [...   130   3e-29
 gi|146317951|ref|YP_001197663.1|  ACT domain-containing prot...   129   5e-29
 gi|125718806|ref|YP_001035939.1|  hypothetical protein SSA_2...   129   7e-29
 gi|148996660|ref|ZP_01824378.1|  hypothetical protein CGSSp1...   128   1e-28


InterPro Summary:  InterProScan

InterPro
IPR002912
Domain
Amino acid-binding ACT
PF01842 [7-72]T 6.2e-09 PF01842 ACT ACT
noIPR
unintegrated
unintegrated
G3DSA:3.30.70.260 [1-88]T 1.1e-06 G3DSA:3.30.70.260 no description no description


COGS Summary:  COGS Search
No hits to the COGs database.
Blocks Summary:  Blocks Search
No significant hits to the Blocks database.

 ProDom Summary:  Protein Domain Search
Residues 6-92 are 50% similar to a (PROTEOME COMPLETE REPRESSOR PHOSPHOSERINE) protein domain (PD029187 which is seen in Q9CGZ6_LACLA.


Paralogs:  Local Blast Search
SMu0065 has no significant similarity (blastp p-value < 1e-3) to any other gene in this genome.


Pfam Summary:  Pfam Search
Residues 7 to 78 (E-value = 8e-07) place SMu0065 in the ACT family which is described as ACT domain (PF01842)

 Top PDB Hits:
No significant hits to the NCBI PDB database.

Gene Protein Sequence:
MEANMKAIITVVGKDRTGIVAGVSTKIAELGLNIDDITQTVLDEYFTMMA
VVSSQESQDFAQLRKEFEAFGETLNVKINIQSSAIFDAMHNL

Gene Nucleotide Sequence:  Sequence Viewer
TTGGAGGCTAATATGAAGGCGATTATTACAGTGGTTGGAAAAGATAGGAC
TGGAATTGTAGCAGGTGTGTCAACTAAAATTGCAGAGTTAGGTCTTAACA
TTGATGATATTACACAGACTGTTTTAGATGAGTATTTTACGATGATGGCA
GTCGTATCTTCTCAAGAAAGTCAGGATTTTGCACAGCTTAGGAAAGAGTT
TGAAGCTTTCGGTGAGACCTTGAATGTCAAAATTAACATTCAAAGTTCAG
CTATTTTTGACGCTATGCATAACTTGTAA

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