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HuGENet
HuGENet™ Workshop, January 24-25, 2008, Atlanta, GA
Networks, Genome-Wide Association Studies, and the Knowledge Base on Genetic Variation and Human Health

Tom Harkin Global Communications Center
Building 19, Rooms 245/246

AGENDA & SLIDES

DAY 1
Session I: The HuGENet™ Roadmap in the era of genome-wide association studies 
Moderator: Muin Khoury
8:30 - 8:50
Introductions, meeting objectives, and HuGENet™ roadmap progress
review
pdf icon (1.2MB)
Muin Khoury
8:50 - 9:10
Systematic review and meta-analysis: HuGENet™ Handbook update
pdf icon (403KB)
Julian Higgins
9:10 - 9:30
Assessing cumulative evidence: “Venice criteria" updatepdf icon (4.1MB)
John Ioannidis
9:30 - 9:50
GWAS: integrating the evidence into field synopses pdf icon (5.8MB)
Teri Manolio
9:50 - 10:10
Discussion
10:10 - 10:30
Break
   
Session II: Field synopses: summarizing and assessing cumulative evidence
Moderator: John Ioannidis
10:30 - 10:50 Schizophrenia pdf icon (929KB)
Lars Bertram
10:50 - 11:10

Bladder cancer pdf icon (334KB)
Nathaniel Rothman and Montserrat Garcia-Closas

11:10 - 11:30 DNA repair pdf icon (2.2MB)
Paolo Vineis, presented by John Ioannidis
11:30 - 11:50

Preterm birth pdf icon (423KB)
Siohban Dolan

11:50 - 12:10

Coronary heart disease pdf icon (145KB)
Adam Butterworth

12:10 - 12:30 Discussion
   
Session III: Online databases and informatics tools
Moderator: Marta Gwinn
1:30 - 1:50 dbGaP and other resources of the National Library of Medicine
pdf icon (6.0MB)
Jim Ostell
1:50 - 2:10 HuGE Navigator pdf icon (1.7MB)
Marta Gwinn and Wei Yu
2:10 - 2:30 CGEMS- Displaying data from genome-wide studies of cancer
pdf icon (2.7MB)
Stephen Chanock
2:30 - 2:50 Disease-specific databases: AlzGene, PDGene, SzGene pdf icon (1.6MB)
Lars Bertram
2:50 - 3:10 Discussion
3:10 - 3:30 Break
   
Session IV: Methodologic issues and linking with data collection
Moderator: Julian Little
3:30 - 3:50

Meta-analysis of published associations vs. pooled analysis by large consortia pdf icon (815KB)
Cecile Janssens

3:50 - 4:10 Integrating information on gene-environment interaction and biology: where do we go from here? pdf icon (1.1MB)
Tim Rebbeck
4:10 - 4:30 Linking field synopses with data collection through disease-specific networks and biobanks (HuGE networks and P3G) pdf icon (4.8MB)
Julian Little and Isabel Fortier (P3G Observatory)
4:30 - 5:00 General discussion

 

DAY 2
Session V: Authoritative, updated and accessible encyclopedia on genetic variation and human health
Moderator: Teri Manolio
8:30 - 8:50 Organizing principles and implementation issues for an online
encyclopedia
pdf icon (495KB)
Paolo Boffetta
8:50 - 9:10 The PharmGKB experience: an online knowledge base on pharmacogenomics pdf icon (985KB)
Ryan Owen
9:10 - 9:30 The GeneReviews model: a multi-authored, online book pdf icon (454KB)
Bonnie Pagon
9:30 - 10:00 Discussion
10:00 - 10:30 Break
   
Session VI: Discussion and Next Steps
Moderator: Muin Khoury
10:30 - 11:00

Introducing an online “encyclopedia” on genetic variation and human health pdf icon (1.5MB)
Muin Khoury

11:00 - 12:00

Moderated discussion and action items

  • The online knowledge base: putting it together and keeping it up to date
  • Action items for participating networks
  • Building ties with other collaborations (GAIN, GEI, P3G, others)
  • Linking to biologic evidence via NCBI databases
  • Priorities for methods development
  • Next steps for the “online encyclopedia”

12:00 Adjourn
Page last reviewed: February 18, 2008 (archived document)
Page last updated: February 18, 2008
Content Source: National Office of Public Health Genomics