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Organism info  Complete genomes  Genomes in progress      organism group:  -- All -- -- All Archaea -- Crenarchaeota Euryarchaeota Nanoarchaeota Other Archaea -- All Bacteria -- Acidobacteria Actinobacteria Aquificae Bacteroidetes/Chlorobi Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria Deinococcus-Thermus Firmicutes Fusobacteria Planctomycetes Proteobacteria Alphaproteobacteria Betaproteobacteria Gammaproteobacteria Deltaproteobacteria Epsilonproteobacteria Spirochaetes Thermotogae Other Bacteria Tools legend: T - TaxMap; P - ProtTable; C - COG Table; D - 3-D neighbors; L - BLAST; S - CDD search; G - GenePlot; X - TaxPlot; M - gMap; F - FTP; R - Publications.   *  size is estimated, otherwise genome size is calculated based on existing sequences     759 Complete Microbial Genomes selected: [A] - 52, [B] - 707  save  GPID Organism King Group * Size GC #chr #plsm GenBank RefSeq Released Modified Center Tools 12997 Acaryochloris marina MBIC11017 B Cyanobacteria 8.36 47.0 1 9 CP000828.1 NC_009925.1 10/16/07 07/25/08 Washington University (WashU) [more] T P   D L S G X   F R 19259 Acholeplasma laidlawii PG-8A B Firmicutes 1.5 31.9 1 CP000896.1 NC_010163.1 12/07/07 07/30/08 Research Institute for Physico-Chemical Medicine, Federal Agency of Public Health and Social Development of the Russian Federation [more] T P   D L S G X   F   15753 Acidiphilium cryptum JF-5 B Alphaproteobacteria 3.97 67.1 1 8 CP000697.1 NC_009484.1 05/11/07 07/26/08 DOE Joint Genome Institute T P   D L S G X   F   16689 Acidithiobacillus ferrooxidans ATCC 53993 B Other Bacteria 2.9 58.9 1 CP001132.1 NC_011206.1 09/05/08 09/08/08 DOE Joint Genome Institute   P     L S G X   F   15771 Acidobacteria bacterium Ellin345 B Acidobacteria 5.7 58.4 1 CP000360.1 NC_008009.1 05/04/06 07/20/08 DOE Joint Genome Institute T P   D L S G X   F   16097 Acidothermus cellulolyticus 11B B Actinobacteria 2.4 66.9 1 CP000481.1 NC_008578.1 11/09/06 07/28/08 DOE Joint Genome Institute T P   D L S G X   F   15708 Acidovorax avenae subsp. citrulli AAC00-1 B Betaproteobacteria 5.4 68.5 1 CP000512.1 NC_008752.1 01/04/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   15685 Acidovorax sp. JS42 B Betaproteobacteria 4.54 66.1 1 2 CP000539.1 NC_008782.1 01/04/07 07/21/08 DOE Joint Genome Institute [more] T P   D L S G X M F   17827 Acinetobacter baumannii ACICU B Gammaproteobacteria 3.99 38.9 1 2 CP000863.1 NC_010611.1 04/15/08 07/29/08 Institute of molecular biology and pathology, CNR, Italy [more] T P   D L S G X M F R 17477 Acinetobacter baumannii ATCC 17978 B Gammaproteobacteria 4.02 38.9 1 2 CP000521.1 NC_009085.1 03/01/07 07/29/08 Yale Univ. T P   D L S G X M F R 28921 Acinetobacter baumannii AYE B Gammaproteobacteria * 3.99 39.3 1 4 CU459141.1 NC_010410.1 02/29/08 07/30/08 Genoscope T P   D L S G X M F R 13001 Acinetobacter baumannii SDF B Gammaproteobacteria 3.45 39.1 1 3 CU468230.2 NC_010400.1 02/29/08 07/30/08 Genoscope T P   D L S G X M F R 12352 Acinetobacter sp. ADP1 B Gammaproteobacteria 3.6 40.4 1 CR543861.1 NC_005966.1 10/30/04 07/18/08 Genoscope T P C D L S G X M F R 18221 Actinobacillus pleuropneumoniae L20 B Gammaproteobacteria 2.3 41.3 1 CP000569.1 NC_009053.1 02/23/07 07/29/08 National Research Council of Canada [more] T P   D L S G X M F R 19135 Actinobacillus pleuropneumoniae serovar 3 str. JL03 B Gammaproteobacteria 2.2 41.2 1 CP000687.1 NC_010278.1 01/16/08 07/29/08 Huazhong Agricultural University T P   D L S G X M F R 29909 Actinobacillus pleuropneumoniae serovar 7 str. AP76 B Gammaproteobacteria 2.31 41.2 1 3 CP001091.1 NC_010939.1 06/10/08 09/22/08 Stiftung Tieraerztliche Hochschule Hannover T P   D L S G X M F   13370 Actinobacillus succinogenes 130Z B Gammaproteobacteria 2.3 44.9 1 CP000746.1 NC_009655.1 07/05/07 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   16697 Aeromonas hydrophila subsp. hydrophila ATCC 7966 B Gammaproteobacteria 4.7 61.5 1 CP000462.1 NC_008570.1 11/06/06 07/28/08 TIGR T P   D L S G X M F R 16723 Aeromonas salmonicida subsp. salmonicida A449 B Gammaproteobacteria * 5.03 58.2 1 5 CP000644.1 NC_009348.1 04/06/07 07/28/08 National Research Council Canada - Institute of Marine Biosciences T P   D L S G X M F R 211 Aeropyrum pernix K1 A Crenarchaeota 1.7 56.3 1 BA000002.3 NC_000854.2 06/26/99 07/22/08 NITE T P C D L S G X   F R 283 Agrobacterium tumefaciens str. C58 B Alphaproteobacteria 5.65 59.0 2 2 AE007869.2 NC_003062.2 12/18/01 09/16/08 Cereon [more] T P C D L S G X   F R 20089 Akkermansia muciniphila ATCC BAA-835 B Other Bacteria 2.7 55.8 1 CP001071.1 NC_010655.1 05/05/08 07/26/08 DOE Joint Genome Institute T P   D L S G X   F   13005 Alcanivorax borkumensis SK2 B Gammaproteobacteria 3.1 54.7 1 AM286690.1 NC_008260.1 07/24/06 07/28/08 Bielefeld Univ T P   D L S G X M F R 30703 Aliivibrio salmonicida LFI1238 B Gammaproteobacteria 4.5 2 FM178379 10/01/08 Welcome Trust Sanger Institute [more]             G X       15763 Alkalilimnicola ehrlichei MLHE-1 B Gammaproteobacteria 3.3 67.5 1 CP000453.1 NC_008340.1 09/12/06 07/19/08 DOE Joint Genome Institute T P   D L S G X   F   13006 Alkaliphilus metalliredigens QYMF B Firmicutes 4.9 36.8 1 CP000724.1 NC_009633.1 06/28/07 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   16083 Alkaliphilus oremlandii OhILAs B Firmicutes 3.1 36.3 1 CP000853.1 NC_009922.1 10/11/07 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   13374 Alteromonas macleodii 'Deep ecotype' B Gammaproteobacteria 4.4 44.9 1 CP001103.1 NC_011138.1 08/14/08 09/22/08 J. Craig Venter Institute   P     L S G X   F   10642 Anabaena variabilis ATCC 29413 B Cyanobacteria 7.07 41.4 1 3 CP000117.1 NC_007413.1 09/15/05 09/22/08 DOE Joint Genome Institute T P C D L S G X M F   12634 Anaeromyxobacter dehalogenans 2CP-C B Deltaproteobacteria 5 74.9 1 CP000251.1 NC_007760.1 01/27/06 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   17729 Anaeromyxobacter sp. Fw109-5 B Deltaproteobacteria 5.3 73.5 1 CP000769.1 NC_009675.1 07/17/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   19743 Anaeromyxobacter sp. K B Deltaproteobacteria 5.1 74.8 1 CP001131.1 NC_011145.1 08/15/08 08/21/08 DOE Joint Genome Institute   P     L S G X M F   40 Anaplasma marginale str. St. Maries B Alphaproteobacteria 1.2 49.8 1 CP000030.1 NC_004842.2 12/08/04 07/21/08 Washington State University T P C D L S G X M F R 336 Anaplasma phagocytophilum HZ B Alphaproteobacteria 1.47 41.6 1 CP000235.1 NC_007797.1 02/21/06 07/20/08 TIGR T P   D L S G X M F R 215 Aquifex aeolicus VF5 B Aquificae 1.59 43.3 1 1 AE000657.1 NC_000918.1 04/16/98 07/21/08 DIVERSA T P C D L S G X   F R 104 Archaeoglobus fulgidus DSM 4304 A Euryarchaeota 2.18 48.6 1 AE000782.1 NC_000917.1 12/06/97 07/21/08 TIGR T P C D L S G X   F R 16319 Arcobacter butzleri RM4018 B Epsilonproteobacteria 2.3 27.0 1 CP000361.1 NC_009850.1 09/27/07 07/28/08 USDA - Agricultural Research Service, USA [more] T P   D L S G X   F R 13242 Aromatoleum aromaticum EbN1 B Betaproteobacteria 4.73 64.7 1 2 CR555306.1 NC_006513.1 11/20/04 07/18/08 Max Planck Institute T P C D L S G X M F R 12512 Arthrobacter aurescens TC1 B Actinobacteria 5.23 62.4 1 2 CP000474.1 NC_008711.1 12/26/06 07/23/08 TIGR [more] T P   D L S G X M F R 12640 Arthrobacter sp. FB24 B Actinobacteria 5.08 65.4 1 3 CP000454.1 NC_008541.1 10/24/06 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   13478 Aster yellows witches'-broom phytoplasma AYWB B Firmicutes 0.73 26.8 1 4 CP000061.1 NC_007716.1 01/11/06 07/25/08 Ohio State University [more] T P C D L S G X M F R 13217 Azoarcus sp. BH72 B Betaproteobacteria 4.4 67.9 1 AM406670.1 NC_008702.1 12/20/06 07/18/08 Bielefeld Univ [more] T P   D L S G X M F R 19267 Azorhizobium caulinodans ORS 571 B Alphaproteobacteria 5.4 67.3 1 AP009384.1 NC_009937.1 10/16/07 07/30/08 University of Tokyo, Japan T P   D L S G X M F R 13403 Bacillus amyloliquefaciens FZB42 B Firmicutes 3.9 46.5 1 CP000560.1 NC_009725.1 08/01/07 07/25/08 Competence Network [more] T P   D L S G X M F R 10784 Bacillus anthracis str. 'Ames Ancestor' B Firmicutes 5.5 35.2 1 2 AE017334.2 NC_007530.2 05/20/04 07/21/08 J. Craig Venter Institute T P C D L S G X M F   309 Bacillus anthracis str. Ames B Firmicutes 5.23 35.4 1 AE016879.1 NC_003997.3 05/02/03 07/20/08 J. Craig Venter Institute T P C D L S G X M F R 10878 Bacillus anthracis str. Sterne B Firmicutes 5.23 35.4 1 AE017225.1 NC_005945.1 06/24/04 07/21/08 DOE Joint Genome Institute T P C D L S G X M F   74 Bacillus cereus ATCC 10987 B Firmicutes 5.43 35.5 1 1 AE017194.1 NC_003909.8 02/13/04 07/20/08 TIGR T P C D L S G X M F R 384 Bacillus cereus ATCC 14579 B Firmicutes 5.42 35.3 1 1 AE016877.1 NC_004722.1 05/02/03 07/21/08 Institut National de la Recherche Agronomique (INRA) T P C D L S G X M F R 12468 Bacillus cereus E33L B Firmicutes 5.85 35.1 1 5 CP000001.1 NC_006274.1 09/16/04 07/23/08 DOE Joint Genome Institute T P C D L S G X M F R 13624 Bacillus cereus subsp. cytotoxis NVH 391-98 B Firmicutes 4.11 35.9 1 1 CP000764.1 NC_009674.1 07/17/07 07/24/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13291 Bacillus clausii KSM-K16 B Firmicutes 4.3 44.8 1 AP006627.1 NC_006582.1 01/03/05 07/18/08 Kao Corporation, Biological Science Laboratories, Japan T P C D L S G X M F R 235 Bacillus halodurans C-125 B Firmicutes 4.2 43.7 1 BA000004.3 NC_002570.2 03/23/99 07/22/08 Japan MSTC T P C D L S G X M F R 13082 Bacillus licheniformis ATCC 14580 B Firmicutes 4.2 46.2 1 AE017333.1 NC_006322.1 09/24/04 07/23/08 University of Goettingen T P C D L S G X M F R 12388 Bacillus licheniformis ATCC 14580 B Firmicutes 4.2 46.2 1 CP000002.3 NC_006270.3 10/06/04 07/23/08 Novozymes Biotech T P C D L S G X M F R 20391 Bacillus pumilus SAFR-032 B Firmicutes 3.7 41.3 1 CP000813.1 NC_009848.1 09/26/07 07/24/08 Baylor College of Medicine [more] T P   D L S G X M F R 76 Bacillus subtilis subsp. subtilis str. 168 B Firmicutes 4.2 43.5 1 AL009126.2 NC_000964.2 12/31/97 07/21/08 BSNR T P C D L S G X M F R 10877 Bacillus thuringiensis serovar konkukian str. 97-27 B Firmicutes 5.28 35.4 1 1 AE017355.1 NC_005957.1 06/30/04 07/23/08 DOE Joint Genome Institute T P C D L S G X M F R 18255 Bacillus thuringiensis str. Al Hakam B Firmicutes 5.36 35.4 1 1 CP000485.1 NC_008600.1 11/27/06 07/29/08 DOE Joint Genome Institute T P   D L S G X M F R 13623 Bacillus weihenstephanensis KBAB4 B Firmicutes 5.91 35.5 1 4 CP000903.1 NC_010184.1 12/21/07 07/24/08 DOE Joint Genome Institute [more] T P   D L S G X M F   46 Bacteroides fragilis NCTC 9343 B Bacteroidetes/Chlorobi 5.24 43.1 1 1 CR626927.1 NC_003228.3 03/03/05 07/22/08 Welcome Trust Sanger Institute T P C D L S G X M F R 13067 Bacteroides fragilis YCH46 B Bacteroidetes/Chlorobi 5.31 43.2 1 1 AP006841.1 NC_006347.1 10/15/04 07/23/08 Kitasato Univ. T P C D L S G X M F R 399 Bacteroides thetaiotaomicron VPI-5482 B Bacteroidetes/Chlorobi 6.33 42.9 1 1 AE015928.1 NC_004663.1 03/29/03 07/21/08 Washington University (WashU) T P C D L S G X M F R 13378 Bacteroides vulgatus ATCC 8482 B Bacteroidetes/Chlorobi 5.2 42.2 1 CP000139.1 NC_009614.1 06/27/07 07/30/08 Washington University (WashU) T P   D L S G X M F R 16249 Bartonella bacilliformis KC583 B Alphaproteobacteria 1.4 38.2 1 CP000524.1 NC_008783.1 01/04/07 07/27/08 TIGR [more] T P   D L S G X M F   196 Bartonella henselae str. Houston-1 B Alphaproteobacteria 1.93 38.2 1 BX897699.1 NC_005956.1 06/24/04 07/23/08 Uppsala Univ. T P C D L S G X M F R 44 Bartonella quintana str. Toulouse B Alphaproteobacteria 1.58 38.8 1 BX897700.1 NC_005955.1 06/24/04 07/23/08 Uppsala Univ. T P C D L S G X M F R 28109 Bartonella tribocorum CIP 105476 B Alphaproteobacteria 2.62 38.8 1 1 AM260525.1 NC_010161.1 11/25/07 09/18/08 Penn State Univ. T P   D L S G X M F R 12513 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) B Gammaproteobacteria 0.69 33.2 1 CP000238.1 NC_007984.1 04/27/06 07/28/08 TIGR T P   D L S G X   F R 9637 Bdellovibrio bacteriovorus HD100 B Deltaproteobacteria 3.8 50.6 1 BX842601.2 NC_005363.1 01/31/04 07/22/08 Max Planck Institute T P C D L S G X   F R 20841 Beijerinckia indica subsp. indica ATCC 9039 B Alphaproteobacteria 4.45 57.0 1 2 CP001016.1 NC_010581.1 04/11/08 07/29/08 DOE Joint Genome Institute T P   D L S G X   F   16321 Bifidobacterium adolescentis ATCC 15703 B Actinobacteria 2.1 59.2 1 AP009256.1 NC_008618.1 12/05/06 07/28/08 Gifu University, Life Science Research Center, Japan [more] T P   D L S G X M F   18773 Bifidobacterium longum DJO10A B Actinobacteria 2.41 60.2 1 2 CP000605.1 NC_010816.1 06/05/08 09/22/08 University of Minnesota [more] T P   D L S G X M F R 328 Bifidobacterium longum NCC2705 B Actinobacteria 2.26 60.1 1 1 AE014295.3 NC_004307.2 10/17/02 07/20/08 Nestle Research Center, Switzerland T P C D L S G X M F R 27 Bordetella avium 197N B Betaproteobacteria 3.7 61.6 1 AM167904.1 NC_010645.1 09/29/06 07/28/08 Welcome Trust Sanger Institute T P   D L S G X M F R 24 Bordetella bronchiseptica RB50 B Betaproteobacteria 5.3 68.1 1 BX470250.1 NC_002927.3 08/12/03 07/21/08 Welcome Trust Sanger Institute T P C D L S G X M F R 25 Bordetella parapertussis 12822 B Betaproteobacteria 4.77 68.1 1 BX470249.1 NC_002928.3 08/12/03 07/21/08 Welcome Trust Sanger Institute T P C D L S G X M F R 26 Bordetella pertussis Tohama I B Betaproteobacteria 4.09 67.7 1 BX470248.1 NC_002929.2 08/12/03 07/21/08 Welcome Trust Sanger Institute T P C D L S G X M F R 28135 Bordetella petrii DSM 12804 B Betaproteobacteria 5.3 65.5 1 AM902716.1 NC_010170.1 12/18/07 09/22/08 Bielefeld Univ T P   D L S G X M F R 17057 Borrelia afzelii PKo B Spirochaetes * 1.24 27.8 1 8 CP000395.1 NC_008277.1 07/31/06 07/28/08 Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB) T P   D L S G X M F R 3 Borrelia burgdorferi B31 B Spirochaetes 1.52 28.2 1 21 AE000783.1 NC_001318.1 12/24/97 07/21/08 TIGR T P C D L S G X M F R 18231 Borrelia duttonii Ly B Spirochaetes 1.57 28.0 1 16 CP000976.1 NC_011229.1 09/15/08 09/17/08 Unit� des Rickettsies - Marseille [more]   P     L S G X M F R 12554 Borrelia garinii PBi B Spirochaetes 0.98 28.1 1 2 CP000013.1 NC_006156.1 11/18/04 07/23/08 Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB) T P C D L S G X M F R 29637 Borrelia hermsii DAH B Spirochaetes 0.92 29.8 1 CP000048.1 NC_010673.1 12/22/06 05/09/08 Rocky Mountain Laboratories, NIAID, NIH T P   D L S G X M F   18233 Borrelia recurrentis A1 B Spirochaetes 1.24 27.5 1 7 CP000993.1 NC_011244.1 09/15/08 09/17/08 Unit� des Rickettsies - Marseille [more]   P     L S G X M F   13597 Borrelia turicatae 91E135 B Spirochaetes 0.92 29.1 1 CP000049.1 NC_008710.1 12/22/06 07/25/08 Rocky Mountain Laboratories, NIAID, NIH [more] T P   D L S G X M F   17 Bradyrhizobium japonicum USDA 110 B Alphaproteobacteria 9.1 64.1 1 BA000040.2 NC_004463.1 02/25/03 07/21/08 Kazusa T P C D L S G X M F R 16137 Bradyrhizobium sp. BTAi1 B Alphaproteobacteria 8.53 64.8 1 1 CP000494.1 NC_009485.1 05/11/07 07/23/08 DOE Joint Genome Institute T P   D L S G X M F R 19575 Bradyrhizobium sp. ORS278 B Alphaproteobacteria 7.5 65.5 1 CU234118.1 NC_009445.1 05/01/07 07/18/08 Genoscope T P   D L S G X M F R 18999 Brucella abortus S19 B Alphaproteobacteria 3.3 57.2 2 CP000887.1 NC_010742.1 05/22/08 05/23/08 Virginia Bioinformatics Institute T P   D L S G X M F R 9619 Brucella abortus bv. 1 str. 9-941 B Alphaproteobacteria 3.29 57.2 2 AE017223.1 NC_006932.1 04/05/05 09/22/08 University of Minnesota T P C D L S G X M F R 20243 Brucella canis ATCC 23365 B Alphaproteobacteria 3.3 57.2 2 CP000872.1 NC_010103.1 11/29/07 07/30/08 Virginia Bioinformatics Institute [more] T P   D L S G X M F   180 Brucella melitensis 16M B Alphaproteobacteria 3.29 57.2 2 AE008917.1 NC_003317.1 01/05/02 07/21/08 Integrated Genomics T P C D L S G X M F R 16203 Brucella melitensis biovar Abortus 2308 B Alphaproteobacteria 3.28 57.2 2 AM040264.1 NC_007618.1 11/22/05 07/27/08 Oak Ridge National Laboratory T P C D L S G X M F R 12514 Brucella ovis ATCC 25840 B Alphaproteobacteria 3.3 57.2 2 CP000709.1 NC_009504.1 05/30/07 07/30/08 TIGR T P   D L S G X M F   320 Brucella suis 1330 B Alphaproteobacteria 3.32 57.3 2 AE014291.4 NC_004310.3 09/25/02 07/20/08 NITE/TIGR T P C D L S G X M F R 20371 Brucella suis ATCC 23445 B Alphaproteobacteria 3.3 57.2 2 CP000911.1 NC_010169.1 12/20/07 07/30/08 Virginia Bioinformatics Institute [more] T P   D L S G X M F   245 Buchnera aphidicola str. APS (Acyrthosiphon pisum) B Gammaproteobacteria 0.66 26.4 1 2 BA000003.2 NC_002528.1 09/19/00 07/18/08 RIKEN, Japan T P C D L S G X M F R 256 Buchnera aphidicola str. Bp (Baizongia pistaciae) B Gammaproteobacteria 0.62 25.3 1 1 AE016826.1 NC_004545.1 01/11/03 07/21/08 University of Valencia T P C D L S G X M F R 16372 Buchnera aphidicola str. Cc (Cinara cedri) B Gammaproteobacteria 0.42 20.1 1 CP000263.1 NC_008513.1 10/18/06 07/28/08 University of Valencia T P   D L S G X M F R 312 Buchnera aphidicola str. Sg (Schizaphis graminum) B Gammaproteobacteria 0.64 25.3 1 AE013218.1 NC_004061.1 06/29/02 07/20/08 Uppsala Univ. T P C D L S G X M F R 13490 Burkholderia ambifaria AMMD B Betaproteobacteria 7.53 66.8 3 1 CP000440.1 NC_008390.1 09/21/06 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   17411 Burkholderia ambifaria MC40-6 B Betaproteobacteria 7.6 66.4 3 1 CP001025.1 NC_010551.1 04/03/08 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13919 Burkholderia cenocepacia AU 1054 B Betaproteobacteria 7.28 66.9 3 CP000378.1 NC_008060.1 06/01/06 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   13918 Burkholderia cenocepacia HI2424 B Betaproteobacteria 7.76 66.8 3 1 CP000458.1 NC_008542.1 10/25/06 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   339 Burkholderia cenocepacia J2315 B Betaproteobacteria 8.07 66.9 3 1 AM747722.1 NC_011002.1 06/19/08 09/23/08 Welcome Trust Sanger Institute   P     L S G X M F   17929 Burkholderia cenocepacia MC0-3 B Betaproteobacteria 7.9 66.6 3 CP000958.1 NC_010508.1 03/13/08 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   171 Burkholderia mallei ATCC 23344 B Betaproteobacteria 5.83 68.5 2 CP000010.1 NC_006348.1 09/21/04 07/23/08 TIGR T P C D L S G X M F R 13943 Burkholderia mallei NCTC 10229 B Betaproteobacteria 5.8 68.5 2 CP000545.1 NC_008835.1 01/30/07 07/29/08 TIGR T P   D L S G X M F   13946 Burkholderia mallei NCTC 10247 B Betaproteobacteria 5.9 68.5 2 CP000547.1 NC_009079.1 02/27/07 07/24/08 TIGR T P   D L S G X M F   13947 Burkholderia mallei SAVP1 B Betaproteobacteria 5.2 68.4 2 CP000525.1 NC_008784.1 01/05/07 07/24/08 TIGR T P   D L S G X M F   19401 Burkholderia multivorans ATCC 17616 B Betaproteobacteria 6.99 66.7 3 1 AP009387.1 NC_010801.1 06/03/08 07/29/08 Tohoku University T P   D L S G X M F   17407 Burkholderia multivorans ATCC 17616 B Betaproteobacteria 6.99 66.7 3 1 CP000869.1 NC_010086.1 11/15/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   17409 Burkholderia phymatum STM815 B Betaproteobacteria 8.7 62.3 2 2 CP001043.1 NC_010622.1 04/22/08 07/28/08 DOE Joint Genome Institute [more] T P   D L S G X M F   17463 Burkholderia phytofirmans PsJN B Betaproteobacteria 8.22 62.3 2 1 CP001052.1 NC_010681.1 05/07/08 05/10/08 DOE Joint Genome Institute [more] T P   D L S G X M F   16182 Burkholderia pseudomallei 1106a B Betaproteobacteria 7.1 68.3 2 CP000572.1 NC_009076.1 02/27/07 07/27/08 TIGR T P   D L S G X M F   13954 Burkholderia pseudomallei 1710b B Betaproteobacteria 7.31 68.0 2 CP000124.1 NC_007434.1 09/30/05 07/24/08 TIGR T P C D L S G X M F   13953 Burkholderia pseudomallei 668 B Betaproteobacteria 7 68.3 2 CP000570.1 NC_009074.1 02/27/07 07/24/08 TIGR T P   D L S G X M F   178 Burkholderia pseudomallei K96243 B Betaproteobacteria 7.3 68.1 2 BX571965.1 NC_006350.1 09/21/04 07/22/08 Welcome Trust Sanger Institute T P C D L S G X M F R 10695 Burkholderia sp. 383 B Betaproteobacteria 8.68 66.3 3 CP000150.1 NC_007509.1 04/02/04 07/22/08 DOE Joint Genome Institute T P C D L S G X M F   10774 Burkholderia thailandensis E264 B Betaproteobacteria 6.72 67.6 2 CP000086.1 NC_007651.1 12/15/05 08/05/08 TIGR T P C D L S G X M F R 10696 Burkholderia vietnamiensis G4 B Betaproteobacteria 8.4 65.7 3 5 CP000616.1 NC_009254.1 03/27/07 07/22/08 DOE Joint Genome Institute T P   D L S G X M F   254 Burkholderia xenovorans LB400 B Betaproteobacteria 9.8 62.6 3 CP000271.1 NC_007952.1 04/10/06 09/10/08 DOE Joint Genome Institute T P   D L S G X M F R 13466 Caldicellulosiruptor saccharolyticus DSM 8903 B Other Bacteria 3 35.3 1 CP000679.1 NC_009437.1 04/19/07 07/27/08 DOE Joint Genome Institute T P   D L S G X   F   17421 Caldivirga maquilingensis IC-167 A Crenarchaeota 2.1 43.1 1 CP000852.1 NC_009954.1 10/05/07 07/29/08 DOE Joint Genome Institute T P   D L S G X   F   17159 Campylobacter concisus 13826 B Epsilonproteobacteria 2.15 39.3 1 2 CP000792.1 NC_009802.1 09/12/07 07/27/08 TIGR T P   D L S G X M F   17161 Campylobacter curvus 525.92 B Epsilonproteobacteria 2 44.5 1 CP000767.1 NC_009715.1 07/25/07 07/27/08 TIGR T P   D L S G X M F   16293 Campylobacter fetus subsp. fetus 82-40 B Epsilonproteobacteria 1.8 33.3 1 CP000487.1 NC_008599.1 11/27/06 07/27/08 TIGR T P   D L S G X M F   20083 Campylobacter hominis ATCC BAA-381 B Epsilonproteobacteria 1.7 31.7 1 1 CP000776.1 NC_009714.1 07/25/07 07/27/08 J. Craig Venter Institute T P   D L S G X M F   303 Campylobacter jejuni RM1221 B Epsilonproteobacteria 1.8 30.3 1 CP000025.1 NC_003912.7 01/07/05 07/20/08 TIGR T P C D L S G X M F R 17163 Campylobacter jejuni subsp. doylei 269.97 B Epsilonproteobacteria 1.8 30.6 1 CP000768.1 NC_009707.1 07/20/07 07/27/08 TIGR T P   D L S G X M F   16135 Campylobacter jejuni subsp. jejuni 81-176 B Epsilonproteobacteria 1.68 30.5 1 2 CP000538.1 NC_008787.1 01/09/07 07/27/08 TIGR T P   D L S G X M F   17953 Campylobacter jejuni subsp. jejuni 81116 B Epsilonproteobacteria 1.6 30.5 1 CP000814.1 NC_009839.1 09/20/07 07/29/08 BBSRC Institute of Food Research T P   D L S G X M F R 8 Campylobacter jejuni subsp. jejuni NCTC 11168 B Epsilonproteobacteria 1.6 30.5 1 AL111168.1 NC_002163.1 02/25/00 07/20/08 Welcome Trust Sanger Institute T P C D L S G X M F R 19981 Candidatus Amoebophilus asiaticus 5a2 B Bacteroidetes/Chlorobi 1.9 35.0 1 CP001102.1 NC_010830.1 06/09/08 06/09/08 DOE Joint Genome Institute T P   D L S G X   F   443 Candidatus Blochmannia floridanus B Gammaproteobacteria 0.71 27.4 1 BX248583.1 NC_005061.1 07/30/03 07/20/08 University of Valencia T P C D L S G X M F R 13875 Candidatus Blochmannia pennsylvanicus str. BPEN B Gammaproteobacteria 0.79 29.6 1 CP000016.1 NC_007292.1 08/04/05 07/23/08 Josephine Bay Paul Center [more] T P C D L S G X M F R 17977 Candidatus Carsonella ruddii PV B Gammaproteobacteria 0.16 16.6 1 AP009180.1 NC_008512.1 10/16/06 07/28/08 Kitasato Univ. T P   D L S G X   F R 21047 Candidatus Desulforudis audaxviator MP104C B Firmicutes 2.3 60.8 1 CP000860.1 NC_010424.1 03/06/08 07/30/08 DOE Joint Genome Institute T P   D L S G X   F   16525 Candidatus Korarchaeum cryptofilum OPF8 A Other Archaea 1.6 49.0 1 CP000968.1 NC_010482.1 03/18/08 07/28/08 DOE Joint Genome Institute T P   D L S G X   F R 18505 Candidatus Methanoregula boonei 6A8 A Euryarchaeota 2.5 54.5 1 CP000780.1 NC_009712.1 07/26/07 07/30/08 DOE Joint Genome Institute [more] T P   D L S G X   F   13989 Candidatus Pelagibacter ubique HTCC1062 B Alphaproteobacteria 1.3 29.7 1 CP000084.1 NC_007205.1 07/22/05 07/25/08 Oregon State University [more] T P C D L S G X M F R 29469 Candidatus Phytoplasma australiense B Firmicutes 0.88 27.4 1 AM422018.1 NC_010544.1 04/02/08 08/28/08 Max Planck Institute   P     L S G X M F R 25335 Candidatus Phytoplasma mali B Other Bacteria 0.6 21.4 1 CU469464.1 NC_011047.1 07/04/08 09/22/08 Federal Biological Research Center for Agriculture and Forestry [more] T P   D L S G X M F R 10700 Candidatus Protochlamydia amoebophila UWE25 B Chlamydiae/Verrucomicrobia 2.41 34.7 1 BX908798.1 NC_005861.1 04/10/04 07/22/08 University of Vienna, Austria T P C D L S G X   F R 16841 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) B Gammaproteobacteria 1.2 34.0 1 CP000488.1 NC_008610.1 12/01/06 07/29/08 DOE Joint Genome Institute T P   D L S G X M F R 19617 Candidatus Sulcia muelleri GWSS B Bacteroidetes/Chlorobi 0.25 22.4 1 CP000770.2 NC_010118.1 07/19/07 07/30/08 University of Arizona T P   D L S G X M F R 18267 Candidatus Vesicomyosocius okutanii HA B Gammaproteobacteria 1 31.6 1 AP009247.1 NC_009465.1 05/08/07 07/29/08 Japan Agency for Maine-Earth Science and Technology T P   D L S G X M F R 253 Carboxydothermus hydrogenoformans Z-2901 B Firmicutes 2.4 42.0 1 CP000141.1 NC_007503.1 10/21/05 07/21/08 TIGR T P C D L S G X   F R 298 Caulobacter crescentus CB15 B Alphaproteobacteria 4 67.2 1 AE005673.1 NC_002696.2 03/22/01 09/03/08 TIGR T P C D L S G X M F R 16306 Caulobacter sp. K31 B Alphaproteobacteria 5.91 67.3 1 2 CP000927.1 NC_010338.1 02/07/08 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   28329 Cellvibrio japonicus Ueda107 B Gammaproteobacteria 4.6 52.0 1 CP000934.1 NC_010995.1 06/19/08 09/22/08 J. Craig Venter Institute [more] T P   D L S G X   F R 229 Chlamydia muridarum Nigg B Chlamydiae/Verrucomicrobia 1.08 40.3 1 1 AE002160.2 NC_002620.2 02/24/00 07/21/08 TIGR T P C D L S G X M F R 28583 Chlamydia trachomatis 434/Bu B Chlamydiae/Verrucomicrobia 1 41.3 1 AM884176.1 NC_010287.1 01/17/08 07/30/08 Welcome Trust Sanger Institute T P   D L S G X M F R 13885 Chlamydia trachomatis A/HAR-13 B Chlamydiae/Verrucomicrobia 1.01 41.3 1 1 CP000051.1 NC_007429.1 09/23/05 07/24/08 Lab of Human Bacterial Pathogenesis T P C D L S G X M F R 45 Chlamydia trachomatis D/UW-3/CX B Chlamydiae/Verrucomicrobia 1.04 41.3 1 AE001273.1 NC_000117.1 10/23/98 07/22/08 ChGP T P C D L S G X M F R 28585 Chlamydia trachomatis L2b/UCH-1/proctitis B Chlamydiae/Verrucomicrobia 1 41.3 1 AM884177.1 NC_010280.1 01/17/08 07/30/08 Welcome Trust Sanger Institute T P   D L S G X M F R 355 Chlamydophila abortus S26/3 B Chlamydiae/Verrucomicrobia 1.14 39.9 1 CR848038.1 NC_004552.2 04/01/05 07/20/08 Welcome Trust Sanger Institute T P C D L S G X M F R 228 Chlamydophila caviae GPIC B Chlamydiae/Verrucomicrobia 1.18 39.2 1 1 AE015925.1 NC_003361.3 04/12/03 07/21/08 TIGR T P C D L S G X M F R 370 Chlamydophila felis Fe/C-56 B Chlamydiae/Verrucomicrobia 1.21 39.3 1 1 AP006861.1 NC_007899.1 03/09/06 07/22/08 Yamaguchi Univ., Japan [more] T P   D L S G X M F R 247 Chlamydophila pneumoniae AR39 B Chlamydiae/Verrucomicrobia 1.23 40.6 1 AE002161.1 NC_002179.2 02/24/00 07/18/08 TIGR T P C D L S G X M F R 248 Chlamydophila pneumoniae CWL029 B Chlamydiae/Verrucomicrobia 1.2 40.6 1 AE001363.1 NC_000922.1 04/07/99 07/18/08 ChGP T P C D L S G X M F R 257 Chlamydophila pneumoniae J138 B Chlamydiae/Verrucomicrobia 1.2 40.6 1 BA000008.3 NC_002491.1 06/28/00 07/18/08 Yamaguchi Univ., Japan T P C D L S G X M F R 420 Chlamydophila pneumoniae TW-183 B Chlamydiae/Verrucomicrobia 1.23 40.6 1 AE009440.1 NC_005043.1 07/25/03 07/23/08 ALTANA Pharma T P C D L S G X M F   29213 Chlorobaculum parvum NCIB 8327 B Bacteroidetes/Chlorobi 2.3 55.8 1 CP001099.1 NC_011027.1 06/27/08 09/22/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13921 Chlorobium chlorochromatii CaD3 B Bacteroidetes/Chlorobi 2.6 44.3 1 CP000108.1 NC_007514.1 10/26/05 07/25/08 DOE Joint Genome Institute T P C D L S G X M F   12606 Chlorobium limicola DSM 245 B Bacteroidetes/Chlorobi 2.8 51.3 1 CP001097.1 NC_010803.1 06/04/08 09/22/08 DOE Joint Genome Institute T P   D L S G X M F   12608 Chlorobium phaeobacteroides BS1 B Bacteroidetes/Chlorobi 2.7 48.9 1 CP001101.1 NC_010831.1 06/09/08 09/22/08 DOE Joint Genome Institute T P   D L S G X M F   12609 Chlorobium phaeobacteroides DSM 266 B Bacteroidetes/Chlorobi 3.1 48.4 1 CP000492.1 NC_008639.1 12/11/06 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   12607 Chlorobium phaeovibrioides DSM 265 B Bacteroidetes/Chlorobi 2 53.0 1 CP000607.1 NC_009337.1 04/12/07 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   302 Chlorobium tepidum TLS B Bacteroidetes/Chlorobi 2.15 56.5 1 AE006470.1 NC_002932.3 07/03/02 07/20/08 TIGR T P C D L S G X M F R 59 Chloroflexus aurantiacus J-10-fl B Chloroflexi 5.3 56.7 1 CP000909.1 NC_010175.1 12/20/07 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   29215 Chloroherpeton thalassium ATCC 35110 B Bacteroidetes/Chlorobi 3.3 45.0 1 CP001100.1 NC_011026.1 06/27/08 09/22/08 DOE Joint Genome Institute [more] T P   D L S G X   F   444 Chromobacterium violaceum ATCC 12472 B Betaproteobacteria 4.8 64.8 1 AE016825.1 NC_005085.1 09/23/03 07/21/08 LNCC - Laboratorio Nacional de Computacao Cientifica T P C D L S G X   F R 12636 Chromohalobacter salexigens DSM 3043 B Gammaproteobacteria 3.7 63.9 1 CP000285.1 NC_007963.1 04/11/06 07/23/08 DOE Joint Genome Institute T P   D L S G X   F   12716 Citrobacter koseri ATCC BAA-895 B Gammaproteobacteria 4.71 53.8 1 2 CP000822.1 NC_009792.1 09/11/07 07/23/08 Washington University (WashU) T P   D L S G X M F   19643 Clavibacter michiganensis subsp. michiganensis NCPPB 382 B Actinobacteria 3.4 72.5 1 2 AM711867.1 NC_009480.1 05/19/07 07/30/08 Bielefeld Univ T P   D L S G X M F R 184 Clavibacter michiganensis subsp. sepedonicus B Actinobacteria 3.44 72.4 1 2 AM849034.1 NC_010407.1 02/29/08 07/17/08 Welcome Trust Sanger Institute T P   D L S G X M F R 77 Clostridium acetobutylicum ATCC 824 B Firmicutes 4.13 30.9 1 1 AE001437.1 NC_003030.1 07/24/01 07/22/08 Oscient Pharmaceuticals Corporation T P C D L S G X M F R 12637 Clostridium beijerinckii NCIMB 8052 B Firmicutes 6 29.9 1 CP000721.1 NC_009617.1 06/27/07 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   19517 Clostridium botulinum A str. ATCC 19397 B Firmicutes 3.9 28.2 1 CP000726.1 NC_009697.1 07/20/07 07/30/08 Los Alamos National Laboratory [more] T P   D L S G X M F R 193 Clostridium botulinum A str. ATCC 3502 B Firmicutes 3.92 28.2 1 1 AM412317.1 NC_009495.1 05/24/07 07/29/08 Welcome Trust Sanger Institute T P   D L S G X M F R 19521 Clostridium botulinum A str. Hall B Firmicutes 3.8 28.2 1 CP000727.1 NC_009698.1 07/20/07 07/30/08 Los Alamos National Laboratory [more] T P   D L S G X M F R 28507 Clostridium botulinum A3 str. Loch Maree B Firmicutes 4.27 28.1 1 1 CP000962.1 NC_010520.1 03/05/08 07/30/08 Los Alamos National Laboratory [more] T P   D L S G X M F R 28857 Clostridium botulinum B str. Eklund 17B B Firmicutes 3.85 27.5 1 1 CP001056.1 NC_010674.1 05/07/08 07/30/08 Los Alamos National Laboratory [more] T P   D L S G X M F   28505 Clostridium botulinum B1 str. Okra B Firmicutes 4.15 28.2 1 1 CP000939.1 NC_010516.1 02/28/08 07/30/08 Los Alamos National Laboratory [more] T P   D L S G X M F R 28855 Clostridium botulinum E3 str. Alaska E43 B Firmicutes 3.7 27.4 1 CP001078.1 NC_010723.1 05/16/08 09/22/08 Los Alamos National Laboratory [more] T P   D L S G X M F   19519 Clostridium botulinum F str. Langeland B Firmicutes 4.02 28.3 1 1 CP000728.1 NC_009699.1 07/20/07 07/30/08 Los Alamos National Laboratory [more] T P   D L S G X M F   78 Clostridium difficile 630 B Firmicutes 4.31 29.1 1 1 AM180355.1 NC_009089.1 09/20/06 07/22/08 Welcome Trust Sanger Institute T P   D L S G X M F R 19065 Clostridium kluyveri DSM 555 B Firmicutes 4.06 32.0 1 1 CP000673.1 NC_009706.1 07/19/07 07/29/08 University of Goettingen T P   D L S G X M F R 16820 Clostridium novyi NT B Firmicutes 2.5 28.9 1 CP000382.1 NC_008593.1 11/17/06 07/28/08 Johns Hopkins Kimmel Comprehensive Cancer Center T P   D L S G X M F R 304 Clostridium perfringens ATCC 13124 B Firmicutes 3.3 28.4 1 CP000246.1 NC_008261.1 07/25/06 07/20/08 TIGR T P   D L S G X M F R 12521 Clostridium perfringens SM101 B Firmicutes * 38095 28.2 1 2 CP000312.1 NC_008262.1 07/26/06 07/23/08 TIGR T P   D L S G X M F R 79 Clostridium perfringens str. 13 B Firmicutes 3.05 28.5 1 1 BA000016.3 NC_003366.1 01/17/02 07/20/08 University of Kyushu T P C D L S G X M F R 16184 Clostridium phytofermentans ISDg B Firmicutes 4.8 35.3 1 CP000885.1 NC_010001.1 11/19/07 09/26/08 DOE Joint Genome Institute T P   D L S G X M F   81 Clostridium tetani E88 B Firmicutes 2.87 28.6 1 1 AE015927.1 NC_004557.1 01/29/03 07/20/08 University of Goettingen T P C D L S G X M F R 314 Clostridium thermocellum ATCC 27405 B Firmicutes 3.8 39.0 1 CP000568.1 NC_009012.1 02/14/07 07/20/08 DOE Joint Genome Institute T P   D L S G X M F   275 Colwellia psychrerythraea 34H B Gammaproteobacteria 5.37 38.0 1 CP000083.1 NC_003910.7 07/26/05 07/19/08 TIGR T P C D L S G X   F R 30729 Coprothermobacter proteolyticus DSM 5265 B Firmicutes 1.4 44.8 1 CP001145.1 NC_011295.1 09/26/08 09/26/08 J. Craig Venter Institute [more]   P     L S G X   F   87 Corynebacterium diphtheriae NCTC 13129 B Actinobacteria 2.49 53.5 1 BX248353.1 NC_002935.2 11/07/03 07/21/08 Welcome Trust Sanger Institute T P C D L S G X M F R 305 Corynebacterium efficiens YS-314 B Actinobacteria 3.15 63.1 1 BA000035.2 NC_004369.1 07/04/03 07/20/08 NITE T P C D L S G X M F R 307 Corynebacterium glutamicum ATCC 13032 B Actinobacteria 3.3 53.8 1 BA000036.3 NC_003450.3 09/02/03 07/20/08 Kitasato Univ. T P C D L S G X M F R 13760 Corynebacterium glutamicum ATCC 13032 B Actinobacteria 3.3 53.8 1 BX927147.1 NC_006958.1 01/26/04 07/20/08 Universitaet Bielefeld T P C D L S G X M F R 19193 Corynebacterium glutamicum R B Actinobacteria 3.35 54.1 1 1 AP009044.1 NC_009342.1 04/04/07 07/25/08 Research Institute of Innovative Technology for the Earth (RITE) T P   D L S G X M F R 13967 Corynebacterium jeikeium K411 B Actinobacteria 2.48 61.4 1 1 CR931997.1 NC_007164.1 06/27/05 07/24/08 Bielefeld Univ T P C D L S G X M F R 29211 Corynebacterium urealyticum DSM 7109 B Actinobacteria 2.37 64.2 1 AM942444.1 NC_010545.1 04/02/08 07/30/08 Bielefeld Univ T P   D L S G X M F   16721 Coxiella burnetii Dugway 5J108-111 B Gammaproteobacteria 2.25 42.4 1 1 CP000733.1 NC_009727.1 08/01/07 10/09/08 J. Craig Venter Institute T P   D L S G X M F   16791 Coxiella burnetii RSA 331 B Gammaproteobacteria 2.04 42.7 1 1 CP000890.1 NC_010117.1 12/05/07 07/27/08 TIGR T P   D L S G X M F   41 Coxiella burnetii RSA 493 B Gammaproteobacteria 2.03 42.6 1 1 AE016828.2 NC_002971.3 04/22/03 07/21/08 TIGR T P C D L S G X M F R 15733 Cupriavidus taiwanensis B Betaproteobacteria 6.46 67.0 2 1 CU633749.1 NC_010528.1 03/27/08 09/22/08 Genoscope T P   D L S G X M F R 20319 Cyanothece sp. ATCC 51142 B Cyanobacteria 5.43 37.9 2 4 CP000806.1 NC_010546.1 04/01/08 07/17/08 Washington University (WashU) [more] T P   D L S G X M F R 54 Cytophaga hutchinsonii ATCC 33406 B Bacteroidetes/Chlorobi 4.4 38.8 1 CP000383.1 NC_008255.1 07/11/06 07/22/08 DOE Joint Genome Institute T P   D L S G X   F R 9635 Dechloromonas aromatica RCB B Betaproteobacteria 4.5 59.2 1 CP000089.1 NC_007298.1 08/05/05 07/19/08 DOE Joint Genome Institute T P C D L S G X   F   214 Dehalococcoides ethenogenes 195 B Chloroflexi 1.47 48.9 1 CP000027.1 NC_002936.3 01/07/05 07/21/08 TIGR T P C D L S G X M F R 15770 Dehalococcoides sp. BAV1 B Chloroflexi 1.3 47.2 1 CP000688.1 NC_009455.1 05/07/07 07/20/08 DOE Joint Genome Institute T P   D L S G X M F   15604 Dehalococcoides sp. CBDB1 B Chloroflexi 1.4 47.0 1 AJ965256.1 NC_007356.1 08/19/05 07/21/08 Max Planck Institute T P C D L S G X M F R 13423 Deinococcus geothermalis DSM 11300 B Deinococcus-Thermus 3.25 66.5 1 2 CP000359.1 NC_008025.1 05/04/06 07/24/08 DOE Joint Genome Institute [more] T P   D L S G X M F   65 Deinococcus radiodurans R1 B Deinococcus-Thermus 3.24 66.6 2 2 AE000513.1 NC_001263.1 11/24/99 07/21/08 TIGR T P C D L S G X M F R 17413 Delftia acidovorans SPH-1 B Betaproteobacteria 6.8 66.5 1 CP000884.1 NC_010002.1 11/16/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F R 16639 Desulfitobacterium hafniense Y51 B Firmicutes 5.73 47.4 1 AP008230.1 NC_007907.1 03/09/06 07/18/08 Research Institute of Innovative Technology for the Earth (RITE) T P   D L S G X M F R 18007 Desulfococcus oleovorans Hxd3 B Deltaproteobacteria 3.9 56.2 1 CP000859.1 NC_009943.1 10/19/07 09/22/08 DOE Joint Genome Institute T P   D L S G X   F   12751 Desulfotalea psychrophila LSv54 B Deltaproteobacteria 3.64 46.6 1 2 CR522870.1 NC_006138.1 08/13/04 07/19/08 e.gene Biotechnologie GmbH T P C D L S G X   F R 13424 Desulfotomaculum reducens MI-1 B Firmicutes 3.6 42.3 1 CP000612.1 NC_009253.1 03/24/07 07/26/08 DOE Joint Genome Institute T P   D L S G X   F   329 Desulfovibrio desulfuricans subsp. desulfuricans str. G20 B Deltaproteobacteria 3.73 57.8 1 CP000112.1 NC_007519.1 10/28/05 07/20/08 DOE Joint Genome Institute T P C D L S G X M F   17227 Desulfovibrio vulgaris subsp. vulgaris DP4 B Deltaproteobacteria 3.7 63.2 1 1 CP000527.1 NC_008751.1 01/03/07 07/30/08 DOE Joint Genome Institute T P   D L S G X M F   51 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough B Deltaproteobacteria 3.8 63.3 1 1 AE017285.1 NC_002937.3 04/13/04 09/05/08 TIGR T P C D L S G X M F R 50 Dichelobacter nodosus VCS1703A B Gammaproteobacteria 1.4 44.4 1 CP000513.1 NC_009446.1 05/04/07 07/21/08 TIGR T P   D L S G X   F R 30731 Dictyoglomus thermophilum H-6-12 B Other Bacteria 2 33.7 1 CP001146.1 NC_011297.1 09/26/08 09/26/08 J. Craig Venter Institute [more]   P     L S G X   F   17417 Dinoroseobacter shibae DFL 12 B Alphaproteobacteria 4.43 65.5 1 5 CP000830.1 NC_009952.1 10/05/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X   F   10694 Ehrlichia canis str. Jake B Alphaproteobacteria 1.3 29.0 1 CP000107.1 NC_007354.1 08/12/05 07/22/08 DOE Joint Genome Institute T P C D L S G X M F R 325 Ehrlichia chaffeensis str. Arkansas B Alphaproteobacteria 1.18 30.1 1 CP000236.1 NC_007799.1 02/21/06 07/20/08 TIGR T P   D L S G X M F R 13356 Ehrlichia ruminantium str. Gardel B Alphaproteobacteria 1.5 27.5 1 CR925677.1 NC_006831.1 02/04/05 07/24/08 CIRAD, France T P C D L S G X M F R 13355 Ehrlichia ruminantium str. Welgevonden B Alphaproteobacteria 1.51 27.5 1 CR925678.1 NC_006832.1 02/04/05 07/21/08 CIRAD, France T P C D L S G X M F R 9614 Ehrlichia ruminantium str. Welgevonden B Alphaproteobacteria 1.52 27.5 1 CR767821.1 NC_005295.2 01/07/05 07/21/08 University of Pretoria, South Africa T P C D L S G X M F R 19701 Elusimicrobium minutum Pei191 B Other Bacteria 1.6 40.0 1 CP001055.1 NC_010644.1 04/30/08 07/30/08 DOE Joint Genome Institute T P   D L S G X   F   12720 Enterobacter sakazakii ATCC BAA-894 B Gammaproteobacteria 4.56 56.7 1 2 CP000783.1 NC_009778.1 08/28/07 07/23/08 Washington University (WashU) T P   D L S G X M F   17461 Enterobacter sp. 638 B Gammaproteobacteria 4.66 52.9 1 1 CP000653.1 NC_009436.1 04/18/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   70 Enterococcus faecalis V583 B Firmicutes 3.36 37.4 1 3 AE016830.1 NC_004668.1 03/29/03 07/21/08 TIGR T P C D L S G X M F R 20585 Erwinia tasmaniensis B Gammaproteobacteria 4.08 53.4 1 5 CU468135.1 NC_010694.1 05/13/08 07/25/08 Max Planck Institute [more] T P   D L S G X   F R 13480 Erythrobacter litoralis HTCC2594 B Alphaproteobacteria 3.05 63.1 1 CP000157.1 NC_007722.1 01/11/06 07/24/08 J. Craig Venter Institute [more] T P C D L S G X M F   16235 Escherichia coli 536 B Gammaproteobacteria 4.9 50.5 1 CP000247.1 NC_008253.1 07/13/06 07/28/08 University of Goettingen T P   D L S G X M F R 16718 Escherichia coli APEC O1 B Gammaproteobacteria 5.51 50.3 1 2 CP000468.1 NC_008563.1 10/04/06 07/29/08 Iowa State University T P   D L S G X M F R 18083 Escherichia coli ATCC 8739 B Gammaproteobacteria 4.7 50.9 1 CP000946.1 NC_010468.1 03/11/08 07/30/08 DOE Joint Genome Institute [more] T P   D L S G X M F   313 Escherichia coli CFT073 B Gammaproteobacteria 5.2 50.5 1 AE014075.1 NC_004431.1 12/10/02 07/20/08 University of Wisconsin-Madison, USA T P C D L S G X M F R 13960 Escherichia coli E24377A B Gammaproteobacteria 5.27 50.6 1 6 CP000800.1 NC_009801.1 09/11/07 07/25/08 TIGR T P   D L S G X M F   13959 Escherichia coli HS B Gammaproteobacteria 4.6 50.8 1 CP000802.1 NC_009800.1 09/10/07 07/25/08 TIGR T P   D L S G X M F   259 Escherichia coli O157:H7 EDL933 B Gammaproteobacteria 5.59 50.3 1 1 AE005174.2 NC_002655.2 02/24/01 07/18/08 University of Wisconsin-Madison, USA T P C D L S G X M F R 27739 Escherichia coli O157:H7 str. EC4115 B Gammaproteobacteria 5.73 50.4 1 2 CP001164.1 NC_011353.1 10/08/08 10/10/08 J. Craig Venter Institute [more]   P     L S G X   F   226 Escherichia coli O157:H7 str. Sakai B Gammaproteobacteria 5.6 50.5 1 2 BA000007.2 NC_002695.1 03/29/00 07/28/08 Osaka Univ. T P C D L S G X M F R 19469 Escherichia coli SMS-3-5 B Gammaproteobacteria 5.25 50.5 1 4 CP000970.1 NC_010498.1 03/20/08 10/01/08 TIGR T P   D L S G X M F R 16259 Escherichia coli UTI89 B Gammaproteobacteria 5.21 50.6 1 1 CP000243.1 NC_007946.1 04/05/06 07/28/08 Washington University (WashU) T P   D L S G X M F R 20079 Escherichia coli str. K12 substr. DH10B B Gammaproteobacteria 4.7 50.8 1 CP000948.1 NC_010473.1 03/14/08 07/24/08 University of Wisconsin-Madison, USA T P   D L S G X M F R 225 Escherichia coli str. K12 substr. MG1655 B Gammaproteobacteria 4.6 50.8 1 U00096.2 NC_000913.2 09/05/97 05/17/08 University of Wisconsin-Madison, USA T P C D L S G X M F R 16351 Escherichia coli str. K12 substr. W3110 B Gammaproteobacteria * 4.65 50.8 1 AP009048.1 AC_000091.1 01/23/06 08/16/07 Nara Institute of Science and Technology T P   D L S G X M F R 10649 Exiguobacterium sibiricum 255-15 B Firmicutes 3.01 47.7 1 2 CP001022.1 NC_010556.1 04/03/08 07/21/08 DOE Joint Genome Institute T P   D L S G X M F R 16719 Fervidobacterium nodosum Rt17-B1 B Thermotogae 1.9 35.0 1 CP000771.1 NC_009718.1 07/30/07 07/28/08 DOE Joint Genome Institute T P   D L S G X   F   18981 Finegoldia magna ATCC 29328 B Firmicutes 1.99 32.1 1 1 AP008971.1 NC_010376.1 02/14/08 07/25/08 Kitasato Univ. T P   D L S G X   F R 16082 Flavobacterium johnsoniae UW101 B Bacteroidetes/Chlorobi 6.1 34.1 1 CP000685.1 NC_009441.1 05/01/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   19979 Flavobacterium psychrophilum JIP02/86 B Bacteroidetes/Chlorobi 2.9 32.5 1 AM398681.1 NC_009613.1 06/25/07 07/29/08 Institut National de la Recherche Agronomique (INRA) T P   D L S G X M F R 16088 Francisella novicida U112 B Gammaproteobacteria 1.9 32.5 1 CP000439.1 NC_008601.1 11/28/06 07/29/08 University of Washington T P   D L S G X M F R 27853 Francisella philomiragia subsp. philomiragia ATCC 25017 B Gammaproteobacteria 2 32.6 1 1 CP000937.1 NC_010336.1 02/11/08 07/30/08 DOE Joint Genome Institute [more] T P   D L S G X M F   16421 Francisella tularensis subsp. holarctica B Gammaproteobacteria 1.9 32.2 1 AM233362.1 NC_007880.1 03/02/06 07/18/08 Lawrence Livermore National Laboratory [more] T P   D L S G X M F   20197 Francisella tularensis subsp. holarctica FTNF002-00 B Gammaproteobacteria 1.9 32.2 1 CP000803.1 NC_009749.1 08/23/07 07/30/08 BioHealthBase [more] T P   D L S G X M F   17265 Francisella tularensis subsp. holarctica OSU18 B Gammaproteobacteria 1.9 32.2 1 CP000437.1 NC_008369.1 09/20/06 07/28/08 Baylor College of Medicine T P   D L S G X M F R 19571 Francisella tularensis subsp. mediasiatica FSC147 B Gammaproteobacteria 1.9 32.3 1 CP000915.1 NC_010677.1 05/07/08 07/30/08 Swedish Defense Research Agency, Umea, Sweden [more] T P   D L S G X M F   17375 Francisella tularensis subsp. tularensis FSC198 B Gammaproteobacteria 1.9 32.3 1 AM286280.1 NC_008245.1 07/12/06 07/28/08 School of Biological Sciences, University of Birmingham, UK T P   D L S G X M F R 9 Francisella tularensis subsp. tularensis SCHU S4 B Gammaproteobacteria 1.9 32.3 1 AJ749949.1 NC_006570.1 12/17/04 07/19/08 Swedish Defence Research Agency [more] T P C D L S G X M F R 18459 Francisella tularensis subsp. tularensis WY96-3418 B Gammaproteobacteria 1.9 32.3 1 CP000608.1 NC_009257.1 03/24/07 07/29/08 BioHealthBase [more] T P   D L S G X M F R 17403 Frankia alni ACN14a B Actinobacteria 7.5 72.8 1 CT573213.2 NC_008278.1 08/03/06 07/25/08 Genoscope T P   D L S G X M F R 13963 Frankia sp. CcI3 B Actinobacteria 5.4 70.1 1 CP000249.1 NC_007777.1 02/06/06 07/18/08 DOE Joint Genome Institute T P   D L S G X M F R 13915 Frankia sp. EAN1pec B Actinobacteria 9 71.2 1 CP000820.1 NC_009921.1 10/10/07 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   295 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 B Fusobacteria 2.17 27.2 1 AE009951.2 NC_003454.1 03/13/02 07/19/08 Integrated Genomics T P C D L S G X M F R 13233 Geobacillus kaustophilus HTA426 B Firmicutes 3.59 52.0 1 1 BA000043.1 NC_006510.1 12/04/04 07/21/08 Japan MSTC T P C D L S G X M F R 18655 Geobacillus thermodenitrificans NG80-2 B Firmicutes * 3.6 48.9 1 1 CP000557.1 NC_009328.1 03/29/07 07/29/08 TEDA School of Biological Sciences and Biotechnology, Nankai University T P   D L S G X M F R 17707 Geobacter bemidjiensis Bem B Deltaproteobacteria 4.6 60.3 1 CP001124.1 NC_011146.1 08/19/08 08/21/08 DOE Joint Genome Institute   P     L S G X M F   17423 Geobacter lovleyi SZ B Deltaproteobacteria 3.98 54.7 1 1 CP001089.1 NC_010814.1 06/05/08 09/22/08 DOE Joint Genome Institute [more] T P   D L S G X M F   177 Geobacter metallireducens GS-15 B Deltaproteobacteria 4.01 59.5 1 1 CP000148.1 NC_007517.1 10/27/05 07/22/08 DOE Joint Genome Institute T P C D L S G X M F   192 Geobacter sulfurreducens PCA B Deltaproteobacteria 3.81 60.9 1 AE017180.1 NC_002939.4 12/13/03 07/21/08 TIGR T P C D L S G X M F R 15768 Geobacter uraniireducens Rf4 B Deltaproteobacteria 5.1 54.2 1 CP000698.1 NC_009483.1 05/11/07 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   9606 Gloeobacter violaceus PCC 7421 B Cyanobacteria 4.66 62.0 1 BA000045.2 NC_005125.1 11/19/03 07/23/08 Kazusa T P C D L S G X   F R 377 Gluconacetobacter diazotrophicus PAl 5 B Alphaproteobacteria * 4.3 66.3 1 2 AM889285.1 NC_010125.1 12/05/07 09/18/08 FAPERJ - RioGene T P   D L S G X M F   13325 Gluconobacter oxydans 621H B Alphaproteobacteria 2.92 60.8 1 5 CP000009.1 NC_006677.1 01/24/05 07/23/08 University of Goettingen T P C D L S G X   F R 19061 Gramella forsetii KT0803 B Bacteroidetes/Chlorobi 3.8 36.6 1 CU207366.1 NC_008571.1 11/06/06 07/29/08 Max Planck Institute [more] T P   D L S G X   F R 17111 Granulibacter bethesdensis CGDNIH1 B Alphaproteobacteria 2.7 59.1 1 CP000394.1 NC_008343.1 09/13/06 07/28/08 Rocky Mountain Laboratories, NIAID, NIH [more] T P   D L S G X   F R 38 Haemophilus ducreyi 35000HP B Gammaproteobacteria 1.7 38.2 1 AE017143.1 NC_002940.2 07/23/03 09/22/08 Ohio State University T P C D L S G X M F   11752 Haemophilus influenzae 86-028NP B Gammaproteobacteria 1.9 38.2 1 CP000057.2 NC_007146.2 04/23/04 07/23/08 Columbus Children's Research Institute and The Ohio State University, Pediatrics, USA T P C D L S G X M F R 16400 Haemophilus influenzae PittEE B Gammaproteobacteria 1.8 38.0 1 CP000671.1 NC_009566.1 06/07/07 07/28/08 Allegheny-Singer Research Institute (ASRI) T P   D L S G X M F R 16401 Haemophilus influenzae PittGG B Gammaproteobacteria 1.9 38.0 1 CP000672.1 NC_009567.1 06/07/07 07/28/08 Allegheny-Singer Research Institute (ASRI) T P   D L S G X M F R 219 Haemophilus influenzae Rd KW20 B Gammaproteobacteria 1.8 38.1 1 L42023.1 NC_000907.1 07/28/95 07/18/08 TIGR T P C D L S G X M F R 322 Haemophilus somnus 129PT B Gammaproteobacteria 2.01 37.2 1 1 CP000436.1 NC_008309.1 08/22/06 07/20/08 DOE Joint Genome Institute T P   D L S G X M F R 388 Haemophilus somnus 2336 B Gammaproteobacteria 2.3 37.4 1 CP000947.1 NC_010519.1 02/26/08 07/21/08 Virginia Tech [more] T P   D L S G X M F   16064 Hahella chejuensis KCTC 2396 B Gammaproteobacteria 7.22 53.9 1 CP000155.1 NC_007645.1 12/14/05 07/26/08 Korea Research Institute of Bioscience and Biotechnology T P C D L S G X   F R 105 Haloarcula marismortui ATCC 43049 A Euryarchaeota 4.28 61.1 2 7 AY596297.1 NC_006396.1 11/03/04 07/22/08 Institute for Systems Biology [more] T P C D L S G X   F R 106 Halobacterium salinarum R1 A Euryarchaeota 2.66 65.7 1 4 AM774415.1 NC_010364.1 02/12/08 07/30/08 Max Planck Institute T P   D L S G X M F R 217 Halobacterium sp. NRC-1 A Euryarchaeota 2.57 65.9 1 2 AE004437.1 NC_002607.1 10/01/00 07/18/08 University of Massachusetts-Amherst, University of Washington T P C D L S G X M F R 17185 Haloquadratum walsbyi DSM 16790 A Euryarchaeota 3.18 47.9 1 1 AM180088.1 NC_008212.1 06/22/06 07/28/08 Max Planck Institute T P   D L S G X   F R 15767 Halorhodospira halophila SL1 B Gammaproteobacteria 2.7 68.0 1 CP000544.1 NC_008789.1 01/10/07 07/26/08 DOE Joint Genome Institute T P   D L S G X   F   17251 Helicobacter acinonychis str. Sheeba B Epsilonproteobacteria 1.6 38.2 1 1 AM260522.1 NC_008229.1 06/28/06 07/28/08 Penn State Univ. T P   D L S G X M F R 185 Helicobacter hepaticus ATCC 51449 B Epsilonproteobacteria 1.8 35.9 1 AE017125.1 NC_004917.1 06/18/03 07/21/08 University of Wuerzburg T P C D L S G X M F R 233 Helicobacter pylori 26695 B Epsilonproteobacteria 1.67 38.9 1 AE000511.1 NC_000915.1 08/07/97 09/22/08 TIGR T P C D L S G X M F R 31341 Helicobacter pylori G27 B Epsilonproteobacteria 1.71 38.9 1 1 CP001173.1 NC_011333.1 10/03/08 10/03/08 University of Oregon [more]   P     L S G X M F   16183 Helicobacter pylori HPAG1 B Epsilonproteobacteria 1.61 39.1 1 1 CP000241.1 NC_008086.1 06/06/06 07/27/08 Washington University (WashU) T P   D L S G X M F R 234 Helicobacter pylori J99 B Epsilonproteobacteria 1.6 39.2 1 AE001439.1 NC_000921.1 01/29/99 07/18/08 ASTRA T P C D L S G X M F R 29045 Helicobacter pylori Shi470 B Epsilonproteobacteria 1.6 38.9 1 CP001072.2 NC_010698.2 05/14/08 10/10/08 Washington University (WashU) T P   D L S G X M F   13427 Heliobacterium modesticaldum Ice1 B Firmicutes 3.1 57.0 1 CP000930.2 NC_010337.1 02/11/08 07/30/08 Arizona State University [more] T P   D L S G X   F R 13467 Herminiimonas arsenicoxydans B Betaproteobacteria 3.4 54.3 1 CU207211.1 NC_009138.1 03/16/07 07/20/08 Genoscope T P   D L S G X M F R 16523 Herpetosiphon aurantiacus ATCC 23779 B Chloroflexi 6.74 50.9 1 2 CP000875.1 NC_009972.1 11/13/07 07/24/08 DOE Joint Genome Institute T P   D L S G X   F   18891 Hydrogenobaculum sp. Y04AAS1 B Aquificae 1.6 34.8 1 CP001130.1 NC_011126.1 08/06/08 09/22/08 DOE Joint Genome Institute   P     L S G X   F   208 Hyperthermus butylicus DSM 5456 A Crenarchaeota 1.7 53.7 1 CP000493.1 NC_008818.1 01/22/07 07/29/08 University of Copenhagen [more] T P   D L S G X   F R 15721 Hyphomonas neptunium ATCC 15444 B Alphaproteobacteria 3.71 61.9 1 CP000158.1 NC_008358.1 09/18/06 07/21/08 TIGR T P   D L S G X   F R 10790 Idiomarina loihiensis L2TR B Gammaproteobacteria 2.84 47.0 1 AE017340.1 NC_006512.1 12/02/04 07/23/08 University of Hawaii T P C D L S G X M F R 13914 Ignicoccus hospitalis KIN4/I A Crenarchaeota 1.3 56.5 1 CP000816.1 NC_009776.1 08/29/07 07/30/08 DOE Joint Genome Institute T P   D L S G X   F   12733 Jannaschia sp. CCS1 B Alphaproteobacteria 4.39 62.2 1 1 CP000264.1 NC_007802.1 02/27/06 07/23/08 DOE Joint Genome Institute T P   D L S G X   F R 16549 Janthinobacterium sp. Marseille B Betaproteobacteria 4.1 54.2 1 CP000269.1 NC_009659.1 07/06/07 07/28/08 CNRS [more] T P   D L S G X M F R 10689 Kineococcus radiotolerans SRS30216 B Actinobacteria 4.99 74.2 1 2 CP000750.2 NC_009664.1 07/10/07 07/22/08 DOE Joint Genome Institute T P   D L S G X   F   28471 Klebsiella pneumoniae 342 B Gammaproteobacteria 5.88 56.9 1 2 CP000964.1 NC_011283.1 09/24/08 09/24/08 J. Craig Venter Institute [more]   P     L S G X M F R 31 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 B Gammaproteobacteria 5.69 57.1 1 5 CP000647.1 NC_009648.1 07/05/07 07/22/08 Washington University (WashU) T P   D L S G X M F   27833 Kocuria rhizophila DC2201 B Actinobacteria 2.7 71.2 1 AP009152.1 NC_010617.1 04/17/08 07/28/08 National Institute of Technology and Evaluation T P   D L S G X   F R 82 Lactobacillus acidophilus NCFM B Firmicutes 2 34.7 1 CP000033.3 NC_006814.3 01/31/05 07/22/08 California Polytechnic State University [more] T P C D L S G X M F R 404 Lactobacillus brevis ATCC 367 B Firmicutes 2.35 46.1 1 2 CP000416.1 NC_008497.1 10/13/06 07/30/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 402 Lactobacillus casei ATCC 334 B Firmicutes 2.93 46.6 1 1 CP000423.1 NC_008526.1 10/13/06 08/26/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 30359 Lactobacillus casei BL23 B Firmicutes 3.1 46.3 1 FM177140.1 NC_010999.1 06/19/08 09/22/08 CNRS [more]   P     L S G X M F   16871 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 B Firmicutes 1.86 49.7 1 CR954253.1 NC_008054.1 05/26/06 07/28/08 Genoscope T P   D L S G X M F R 403 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 B Firmicutes 1.9 49.7 1 CP000412.1 NC_008529.1 10/13/06 07/25/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 18979 Lactobacillus fermentum IFO 3956 B Firmicutes 2.1 51.5 1 AP008937.1 NC_010610.1 04/15/08 07/25/08 Kitasato Univ. T P   D L S G X M F R 84 Lactobacillus gasseri ATCC 33323 B Firmicutes 1.9 35.3 1 CP000413.1 NC_008530.1 10/13/06 07/25/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 17811 Lactobacillus helveticus DPC 4571 B Firmicutes 2.1 37.1 1 CP000517.1 NC_010080.1 11/15/07 07/29/08 Teagasc, Moorepark Food Research Centre T P   D L S G X M F R 9638 Lactobacillus johnsonii NCC 533 B Firmicutes 2 34.6 1 AE017198.1 NC_005362.1 02/18/04 07/21/08 Nestle Research Center, Switzerland T P C D L S G X M F R 356 Lactobacillus plantarum WCFS1 B Firmicutes 3.34 44.4 1 3 AL935263.1 NC_004567.1 02/05/03 07/20/08 Wageningen Centre for Food Sciences T P C D L S G X M F R 19011 Lactobacillus reuteri F275 B Firmicutes 2 38.9 1 AP007281.1 NC_010609.1 04/15/08 07/24/08 Kitasato Univ. T P   D L S G X M F R 15766 Lactobacillus reuteri F275 B Firmicutes 2 38.9 1 CP000705.1 NC_009513.1 06/01/07 09/08/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13435 Lactobacillus sakei subsp. sakei 23K B Firmicutes 1.9 41.3 1 CR936503.1 NC_007576.1 11/02/05 07/24/08 Institut National de la Recherche Agronomique (INRA) T P C D L S G X M F R 13280 Lactobacillus salivarius UCC118 B Firmicutes 2.1 33.0 1 3 CP000233.1 NC_007929.1 03/30/06 07/28/08 University College Cork T P   D L S G X M F R 18797 Lactococcus lactis subsp. cremoris MG1363 B Firmicutes 2.5 35.7 1 AM406671.1 NC_009004.1 02/06/07 07/29/08 Bielefeld Univ [more] T P   D L S G X M F R 401 Lactococcus lactis subsp. cremoris SK11 B Firmicutes 2.56 35.8 1 5 CP000425.1 NC_008527.1 10/13/06 07/23/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 72 Lactococcus lactis subsp. lactis Il1403 B Firmicutes 2.4 35.3 1 AE005176.1 NC_002662.1 05/05/01 07/22/08 Institut National de la Recherche Agronomique (INRA) T P C D L S G X M F R 183 Lawsonia intracellularis PHE/MN1-00 B Deltaproteobacteria 1.76 33.1 1 3 AM180252.1 NC_008011.1 05/05/06 07/28/08 University of Minnesota T P   D L S G X   F   17491 Legionella pneumophila str. Corby B Gammaproteobacteria 3.6 38.5 1 CP000675.1 NC_009494.1 05/24/07 09/29/08 Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB) T P   D L S G X M F R 13126 Legionella pneumophila str. Lens B Gammaproteobacteria 3.41 38.4 1 1 CR628337.1 NC_006369.1 10/07/04 07/23/08 Institut Pasteur T P C D L S G X M F R 13127 Legionella pneumophila str. Paris B Gammaproteobacteria 3.64 38.3 1 1 CR628336.1 NC_006368.1 10/07/04 07/23/08 Institut Pasteur T P C D L S G X M F R 22 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 B Gammaproteobacteria 3.4 38.3 1 AE017354.1 NC_002942.5 09/28/04 07/22/08 Columbia Genome Center T P C D L S G X M F R 212 Leifsonia xyli subsp. xyli str. CTCB07 B Actinobacteria 2.58 67.7 1 AE016822.1 NC_006087.1 08/13/04 07/23/08 Sao Paulo state (Brazil) Consortium T P C D L S G X   F R 16153 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' B Spirochaetes 3.95 38.9 2 1 CP000777.1 NC_010842.1 02/13/08 06/18/08 Monash University [more] T P   D L S G X M F R 20133 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' B Spirochaetes 3.95 38.9 2 1 CP000787.1 NC_010843.1 02/13/08 07/30/08 Institut Pasteur [more] T P   D L S G X M F R 16148 Leptospira borgpetersenii serovar Hardjo-bovis JB197 B Spirochaetes 3.9 40.2 2 CP000350.1 NC_008510.1 10/13/06 07/27/08 Monash University [more] T P   D L S G X M F R 16146 Leptospira borgpetersenii serovar Hardjo-bovis L550 B Spirochaetes 3.92 40.2 2 CP000349.1 NC_008509.1 10/13/06 07/27/08 Monash University [more] T P   D L S G X M F R 10687 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 B Spirochaetes 4.63 35.0 2 AE016823.1 NC_005823.1 03/19/04 07/22/08 Sao Paulo state (Brazil) Consortium T P C D L S G X M F R 293 Leptospira interrogans serovar Lai str. 56601 B Spirochaetes 4.69 35.0 2 AE010301.1 NC_004343.1 04/25/03 07/19/08 Chinese National HGC, Shanghai T P C D L S G X M F R 20039 Leptothrix cholodnii SP-6 B Betaproteobacteria 4.9 68.9 1 CP001013.1 NC_010524.1 03/25/08 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   16062 Leuconostoc citreum KM20 B Firmicutes 1.9 38.9 1 4 DQ489736.1 NC_010471.1 03/12/08 07/26/08 Korea Research Institute of Bioscience and Biotechnology T P   D L S G X M F R 315 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 B Firmicutes 2.04 37.7 1 1 CP000414.1 NC_008531.1 10/13/06 07/23/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 86 Listeria innocua Clip11262 B Firmicutes 3.09 37.4 1 1 AL592022.1 NC_003212.1 10/27/01 07/22/08 Institut Pasteur T P C D L S G X M F R 276 Listeria monocytogenes EGD-e B Firmicutes 2.94 38.0 1 AL591824.1 NC_003210.1 10/27/01 07/19/08 European Consortium T P C D L S G X M F R 85 Listeria monocytogenes str. 4b F2365 B Firmicutes 2.91 38.0 1 AE017262.2 NC_002973.6 04/30/04 07/22/08 TIGR T P C D L S G X M F R 13443 Listeria welshimeri serovar 6b str. SLCC5334 B Firmicutes 2.8 36.4 1 AM263198.1 NC_008555.1 10/27/06 07/28/08 Universitat Giessen [more] T P   D L S G X M F R 19619 Lysinibacillus sphaericus C3-41 B Firmicutes 4.78 37.1 1 1 CP000817.1 NC_010382.1 02/27/08 07/30/08 Chinese Academy of Sciences [more] T P   D L S G X M F R 262 Magnetococcus sp. MC-1 B Other Bacteria 4.7 54.2 1 CP000471.1 NC_008576.1 11/08/06 07/18/08 DOE Joint Genome Institute T P   D L S G X   F   16217 Magnetospirillum magneticum AMB-1 B Alphaproteobacteria 5 65.1 1 AP007255.1 NC_007626.1 12/01/05 07/25/08 Tokyo University of Agriculture and Technology, Japan T P C D L S G X M F R 13068 Mannheimia succiniciproducens MBEL55E B Gammaproteobacteria 2.3 42.5 1 AE016827.1 NC_006300.1 09/21/04 09/24/08 Korea Advanced Institute of Science and Technology T P C D L S G X M F R 17333 Maricaulis maris MCS10 B Alphaproteobacteria 3.37 62.7 1 CP000449.1 NC_008347.1 09/14/06 07/28/08 DOE Joint Genome Institute [more] T P   D L S G X   F   13239 Marinobacter aquaeolei VT8 B Gammaproteobacteria 4.75 56.9 1 2 CP000514.1 NC_008740.1 12/28/06 07/27/08 DOE Joint Genome Institute [more] T P   D L S G X M F   17445 Marinomonas sp. MWYL1 B Gammaproteobacteria 5.1 42.6 1 CP000749.1 NC_009654.1 07/05/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   10650 Mesoplasma florum L1 B Firmicutes 0.79 27.0 1 AE017263.1 NC_006055.1 07/19/04 07/22/08 Broad Institute T P C D L S G X   F   18 Mesorhizobium loti MAFF303099 B Alphaproteobacteria 7.6 62.5 1 2 BA000012.4 NC_002678.2 02/24/01 07/22/08 Kazusa T P C D L S G X M F R 10690 Mesorhizobium sp. BNC1 B Alphaproteobacteria 4.94 61.1 1 3 CP000390.1 NC_008254.1 07/11/06 07/22/08 DOE Joint Genome Institute T P   D L S G X M F   17447 Metallosphaera sedula DSM 5348 A Crenarchaeota 2.2 46.2 1 CP000682.1 NC_009440.1 04/25/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X   F R 18653 Methanobrevibacter smithii ATCC 35061 A Euryarchaeota 1.9 31.0 1 CP000678.1 NC_009515.1 06/04/07 07/29/08 Washington University (WashU) [more] T P   D L S G X   F R 102 Methanocaldococcus jannaschii DSM 2661 A Euryarchaeota 1.76 31.3 2 L77117.1 NC_000909.1 08/23/96 07/21/08 TIGR T P C D L S G X   F R 9634 Methanococcoides burtonii DSM 6242 A Euryarchaeota 2.58 40.8 1 CP000300.1 NC_007955.1 04/10/06 07/21/08 DOE Joint Genome Institute T P   D L S G X   F   18641 Methanococcus aeolicus Nankai-3 A Euryarchaeota 1.6 30.0 1 CP000743.1 NC_009635.1 06/29/07 07/30/08 DOE Joint Genome Institute T P   D L S G X M F   17641 Methanococcus maripaludis C5 A Euryarchaeota 1.81 33.0 1 1 CP000609.1 NC_009135.1 03/15/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   19639 Methanococcus maripaludis C6 A Euryarchaeota 1.7 33.4 1 CP000867.1 NC_009975.1 11/13/07 07/30/08 DOE Joint Genome Institute T P   D L S G X M F   18819 Methanococcus maripaludis C7 A Euryarchaeota 1.8 33.3 1 CP000745.1 NC_009637.1 06/29/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   10632 Methanococcus maripaludis S2 A Euryarchaeota 1.66 33.1 1 BX950229.1 NC_005791.1 10/07/04 07/22/08 University of Washington T P C D L S G X M F R 17889 Methanococcus vannielii SB A Euryarchaeota 1.7 31.3 1 CP000742.1 NC_009634.1 06/29/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   18109 Methanocorpusculum labreanum Z A Euryarchaeota 1.8 50.0 1 CP000559.1 NC_008942.1 02/01/07 07/29/08 DOE Joint Genome Institute T P   D L S G X   F   16330 Methanoculleus marisnigri JR1 A Euryarchaeota 2.5 62.1 1 CP000562.1 NC_009051.1 02/16/07 07/28/08 DOE Joint Genome Institute T P   D L S G X   F   294 Methanopyrus kandleri AV19 A Euryarchaeota 1.69 61.2 1 AE009439.1 NC_003551.1 04/04/02 07/19/08 Fidelity Systems T P C D L S G X   F R 15765 Methanosaeta thermophila PT A Euryarchaeota 1.9 53.5 1 CP000477.1 NC_008553.1 10/25/06 07/26/08 DOE Joint Genome Institute T P   D L S G X   F   290 Methanosarcina acetivorans C2A A Euryarchaeota 5.75 42.7 1 AE010299.1 NC_003552.1 04/05/02 07/19/08 Broad Institute T P C D L S G X M F R 103 Methanosarcina barkeri str. Fusaro A Euryarchaeota 4.84 39.2 1 1 CP000099.1 NC_007355.1 08/12/05 07/22/08 DOE Joint Genome Institute T P C D L S G X M F R 300 Methanosarcina mazei Go1 A Euryarchaeota 4.1 41.5 1 AE008384.1 NC_003901.1 07/20/02 07/20/08 University of Goettingen T P C D L S G X M F R 15579 Methanosphaera stadtmanae DSM 3091 A Euryarchaeota 1.77 27.6 1 CP000102.1 NC_007681.1 01/05/06 07/25/08 University of Goettingen T P C D L S G X   F R 13015 Methanospirillum hungatei JF-1 A Euryarchaeota 3.54 45.1 1 CP000254.1 NC_007796.1 02/17/06 07/25/08 DOE Joint Genome Institute T P   D L S G X   F   289 Methanothermobacter thermautotrophicus str. Delta H A Euryarchaeota 1.8 49.5 1 AE000666.1 NC_000916.1 11/26/97 07/19/08 Oscient Pharmaceuticals Corporation [more] T P C D L S G X   F R 28995 Methylacidiphilum infernorum V4 B Other Bacteria 2.3 45.5 1 CP000975.1 NC_010794.1 05/30/08 09/22/08 University of Hawaii T P   D L S G X   F R 10789 Methylibium petroleiphilum PM1 B Betaproteobacteria 4.6 68.8 1 1 CP000555.1 NC_008825.1 01/29/07 10/09/08 DOE Joint Genome Institute T P   D L S G X M F R 10647 Methylobacillus flagellatus KT B Betaproteobacteria 3 55.7 1 CP000284.1 NC_007947.1 04/10/06 07/22/08 DOE Joint Genome Institute T P   D L S G X   F R 18637 Methylobacterium extorquens PA1 B Alphaproteobacteria 5.5 68.2 1 CP000908.1 NC_010172.1 12/20/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   19559 Methylobacterium populi BJ001 B Alphaproteobacteria 5.85 69.4 1 2 CP001029.1 NC_010725.1 04/09/08 09/22/08 DOE Joint Genome Institute T P   D L S G X M F   18817 Methylobacterium radiotolerans JCM 2831 B Alphaproteobacteria 6.92 71.0 1 8 CP001001.1 NC_010505.1 03/21/08 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   18809 Methylobacterium sp. 4-46 B Alphaproteobacteria 7.78 71.5 1 2 CP000943.1 NC_010511.1 02/20/08 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   21 Methylococcus capsulatus str. Bath B Gammaproteobacteria 3.3 63.6 1 AE017282.2 NC_002977.6 09/24/04 07/21/08 TIGR T P C D L S G X   F R 27835 Microcystis aeruginosa NIES-843 B Cyanobacteria 5.8 42.3 1 AP009552.1 NC_010296.1 01/24/08 09/18/08 Kazusa T P   D L S G X   F R 10648 Moorella thermoacetica ATCC 39073 B Firmicutes 2.6 55.8 1 CP000232.1 NC_007644.1 12/12/05 07/22/08 DOE Joint Genome Institute T P C D L S G X   F   15691 Mycobacterium abscessus B Actinobacteria 5.12 64.1 1 1 CU458896.1 NC_010397.1 03/01/08 07/17/08 Genoscope T P   D L S G X   F   88 Mycobacterium avium 104 B Actinobacteria 5.5 69.0 1 CP000479.1 NC_008595.1 11/20/06 07/21/08 TIGR T P   D L S G X M F   91 Mycobacterium avium subsp. paratuberculosis K-10 B Actinobacteria 4.8 69.3 1 AE016958.1 NC_002944.2 01/30/04 07/21/08 University of Minnesota T P C D L S G X M F R 89 Mycobacterium bovis AF2122/97 B Actinobacteria 4.35 65.6 1 BX248333.1 NC_002945.3 06/06/03 07/21/08 Welcome Trust Sanger Institute T P C D L S G X M F R 18059 Mycobacterium bovis BCG str. Pasteur 1173P2 B Actinobacteria 4.4 65.6 1 AM408590.1 NC_008769.1 01/08/07 07/29/08 Institut Pasteur [more] T P   D L S G X M F R 15760 Mycobacterium gilvum PYR-GCK B Actinobacteria 5.96 67.7 1 3 CP000656.1 NC_009338.1 04/13/07 07/26/08 DOE Joint Genome Institute T P   D L S G X M F   90 Mycobacterium leprae TN B Actinobacteria 3.27 57.8 1 AL450380.1 NC_002677.1 03/10/01 07/22/08 Welcome Trust Sanger Institute T P C D L S G X M F R 16725 Mycobacterium marinum M B Actinobacteria 6.62 65.7 1 1 CP000854.1 NC_010612.1 04/15/08 07/20/08 Welcome Trust Sanger Institute T P   D L S G X M F R 92 Mycobacterium smegmatis str. MC2 155 B Actinobacteria 7 67.4 1 CP000480.1 NC_008596.1 11/20/06 07/21/08 TIGR T P   D L S G X M F   16079 Mycobacterium sp. JLS B Actinobacteria 6 68.4 1 CP000580.1 NC_009077.1 02/27/07 07/19/08 DOE Joint Genome Institute T P   D L S G X M F   16081 Mycobacterium sp. KMS B Actinobacteria 6.22 68.2 1 2 CP000518.1 NC_008705.1 12/20/06 07/19/08 DOE Joint Genome Institute T P   D L S G X M F   15762 Mycobacterium sp. MCS B Actinobacteria 5.92 68.4 1 1 CP000384.1 NC_008146.1 06/09/06 07/19/08 DOE Joint Genome Institute T P   D L S G X M F   223 Mycobacterium tuberculosis CDC1551 B Actinobacteria 4.4 65.6 1 AE000516.2 NC_002755.2 09/10/02 07/18/08 TIGR T P C D L S G X M F R 15642 Mycobacterium tuberculosis F11 B Actinobacteria 4.4 65.6 1 CP000717.1 NC_009565.1 06/07/07 07/25/08 Broad Institute T P   D L S G X M F   18883 Mycobacterium tuberculosis H37Ra B Actinobacteria 4.4 65.6 1 CP000611.1 NC_009525.1 05/31/07 07/29/08 Chinese National HGC, Shanghai [more] T P   D L S G X M F R 224 Mycobacterium tuberculosis H37Rv B Actinobacteria 4.4 65.6 1 AL123456.2 NC_000962.2 06/20/98 07/18/08 Welcome Trust Sanger Institute T P C D L S G X M F R 16230 Mycobacterium ulcerans Agy99 B Actinobacteria 5.6 65.5 1 CP000325.1 NC_008611.1 12/01/06 07/28/08 Institut Pasteur T P   D L S G X M F R 15761 Mycobacterium vanbaalenii PYR-1 B Actinobacteria 6.5 67.8 1 CP000511.1 NC_008726.1 12/27/06 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   16095 Mycoplasma agalactiae PG2 B Firmicutes 0.88 29.7 1 CU179680.1 NC_009497.1 05/24/07 07/25/08 Genoscope T P   D L S G X M F R 1422 Mycoplasma arthritidis 158L3-1 B Firmicutes 0.82 30.7 1 CP001047.1 NC_011025.1 06/25/08 09/22/08 TIGR T P   D L S G X M F R 16208 Mycoplasma capricolum subsp. capricolum ATCC 27343 B Firmicutes 1.01 23.8 1 CP000123.1 NC_007633.1 12/06/05 07/25/08 J. Craig Venter Institute T P C D L S G X M F   409 Mycoplasma gallisepticum R B Firmicutes 1 31.5 1 AE015450.1 NC_004829.1 09/02/03 07/21/08 University of Connecticut T P C D L S G X M F R 97 Mycoplasma genitalium G37 B Firmicutes 0.58 31.7 1 L43967.2 NC_000908.2 10/20/95 07/21/08 TIGR T P C D L S G X M F R 13120 Mycoplasma hyopneumoniae 232 B Firmicutes 0.89 28.6 1 AE017332.1 NC_006360.1 10/19/04 07/23/08 Iowa State University T P C D L S G X M F R 10639 Mycoplasma hyopneumoniae 7448 B Firmicutes 0.92 28.5 1 AE017244.1 NC_007332.1 08/08/05 07/21/08 LNCC - Laboratorio Nacional de Computacao Cientifica T P C D L S G X M F R 10675 Mycoplasma hyopneumoniae J B Firmicutes 0.9 28.5 1 AE017243.1 NC_007295.1 08/05/05 07/21/08 LNCC - Laboratorio Nacional de Computacao Cientifica T P C D L S G X M F R 10697 Mycoplasma mobile 163K B Firmicutes 0.78 25.0 1 AE017308.1 NC_006908.1 08/04/04 07/22/08 Broad Institute T P C D L S G X M F R 10616 Mycoplasma mycoides subsp. mycoides SC str. PG1 B Firmicutes 1.2 24.0 1 BX293980.2 NC_005364.2 02/06/04 07/22/08 Royal Institute of Technology, Stockholm, Sweden T P C D L S G X M F R 176 Mycoplasma penetrans HF-2 B Firmicutes 1.36 25.7 1 BA000026.2 NC_004432.1 12/06/02 07/22/08 NIID Japan T P C D L S G X M F R 99 Mycoplasma pneumoniae M129 B Firmicutes 0.82 40.0 1 U00089.2 NC_000912.1 11/15/96 07/22/08 Heidelberg Univ., Germany T P C D L S G X M F R 100 Mycoplasma pulmonis UAB CTIP B Firmicutes 0.96 26.6 1 AL445566.1 NC_002771.1 05/23/01 07/22/08 Genoscope T P C D L S G X M F R 10676 Mycoplasma synoviae 53 B Firmicutes 0.8 28.5 1 AE017245.1 NC_007294.1 08/05/05 07/21/08 LNCC - Laboratorio Nacional de Computacao Cientifica T P C D L S G X M F R 1421 Myxococcus xanthus DK 1622 B Deltaproteobacteria 9.1 68.9 1 CP000113.1 NC_008095.1 06/07/06 07/21/08 TIGR T P   D L S G X M F R 9599 Nanoarchaeum equitans Kin4-M A Nanoarchaeota 0.49 31.6 1 AE017199.1 NC_005213.1 10/21/03 07/21/08 DIVERSA T P C D L S G X   F R 20207 Natranaerobius thermophilus JW/NM-WN-LF B Firmicutes 3.23 36.3 1 2 CP001034.1 NC_010718.1 04/09/08 09/22/08 DOE Joint Genome Institute T P   D L S G X   F   15742 Natronomonas pharaonis DSM 2160 A Euryarchaeota 2.75 63.1 1 2 CR936257.1 NC_007426.1 09/28/05 07/25/08 Max Planck Institute T P C D L S G X   F R 23 Neisseria gonorrhoeae FA 1090 B Betaproteobacteria 2.15 52.7 1 AE004969.1 NC_002946.2 02/14/05 07/21/08 University of Oklahoma T P C D L S G X M F   29335 Neisseria gonorrhoeae NCCP11945 B Betaproteobacteria 2.2 52.4 1 1 CP001050.1 NC_011035.1 07/09/08 09/22/08 Centers for Disease Control and Prevention, NCID/DPD/Entomology Branch, USA [more] T P   D L S G X M F R 16393 Neisseria meningitidis 053442 B Betaproteobacteria 2.2 51.7 1 CP000381.1 NC_010120.1 12/03/07 07/28/08 Microbial Genome Center of ChMPH T P   D L S G X M F R 255 Neisseria meningitidis FAM18 B Betaproteobacteria 2.2 51.6 1 AM421808.1 NC_008767.1 01/04/07 07/22/08 Welcome Trust Sanger Institute [more] T P   D L S G X M F R 251 Neisseria meningitidis MC58 B Betaproteobacteria 2.3 51.5 1 AE002098.2 NC_003112.2 03/10/00 07/18/08 TIGR T P C D L S G X M F R 252 Neisseria meningitidis Z2491 B Betaproteobacteria 2.2 51.8 1 AL157959.1 NC_003116.1 04/13/00 07/18/08 Welcome Trust Sanger Institute T P C D L S G X M F R 357 Neorickettsia sennetsu str. Miyayama B Alphaproteobacteria 0.86 41.1 1 CP000237.1 NC_007798.1 02/21/06 07/20/08 TIGR T P   D L S G X   F R 18963 Nitratiruptor sp. SB155-2 B Epsilonproteobacteria 1.9 39.7 1 AP009178.1 NC_009662.1 07/11/07 07/28/08 Japan Agency for Marine-Earth Science and Technology T P   D L S G X   F R 13473 Nitrobacter hamburgensis X14 B Alphaproteobacteria 5.01 61.6 1 3 CP000319.1 NC_007964.1 04/11/06 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   13474 Nitrobacter winogradskyi Nb-255 B Alphaproteobacteria 3.4 62.0 1 CP000115.1 NC_007406.1 09/12/05 07/25/08 DOE Joint Genome Institute T P C D L S G X M F R 13993 Nitrosococcus oceani ATCC 19707 B Gammaproteobacteria 3.54 50.3 1 1 CP000127.1 NC_007484.1 10/04/05 07/25/08 DOE Joint Genome Institute T P C D L S G X M F R 52 Nitrosomonas europaea ATCC 19718 B Betaproteobacteria 2.81 50.7 1 AL954747.1 NC_004757.1 04/18/03 07/21/08 DOE Joint Genome Institute T P C D L S G X M F R 13913 Nitrosomonas eutropha C91 B Betaproteobacteria 2.82 48.5 1 2 CP000450.1 NC_008344.1 09/13/06 07/28/08 DOE Joint Genome Institute T P   D L S G X M F R 19265 Nitrosopumilus maritimus SCM1 A Crenarchaeota 1.6 34.2 1 CP000866.1 NC_010085.1 11/15/07 07/30/08 DOE Joint Genome Institute T P   D L S G X   F   13912 Nitrosospira multiformis ATCC 25196 B Betaproteobacteria 3.23 53.9 1 3 CP000103.1 NC_007614.1 11/15/05 07/25/08 DOE Joint Genome Institute T P C D L S G X   F   13117 Nocardia farcinica IFM 10152 B Actinobacteria 6.29 70.7 1 2 AP006618.1 NC_006361.1 10/07/04 07/21/08 Department of Bioactive Molecules, National Institute of Infectious Diseases [more] T P C D L S G X   F R 12738 Nocardioides sp. JS614 B Actinobacteria 5.31 71.4 1 1 CP000509.1 NC_008699.1 12/18/06 07/20/08 DOE Joint Genome Institute T P   D L S G X   F   216 Nostoc punctiforme PCC 73102 B Cyanobacteria 9.01 41.4 1 5 CP001037.1 NC_010628.1 04/24/08 07/18/08 DOE Joint Genome Institute T P   D L S G X M F   244 Nostoc sp. PCC 7120 B Cyanobacteria 7.21 41.3 1 6 BA000019.2 NC_003272.1 01/05/02 07/18/08 Kazusa T P C D L S G X M F R 204 Novosphingobium aromaticivorans DSM 12444 B Alphaproteobacteria 4.23 65.1 1 2 CP000248.1 NC_007794.1 02/10/06 07/23/08 DOE Joint Genome Institute T P   D L S G X   F   284 Oceanobacillus iheyensis HTE831 B Firmicutes 3.63 35.7 1 BA000028.3 NC_004193.1 12/26/01 07/20/08 Japan MSTC T P C D L S G X   F R 19485 Ochrobactrum anthropi ATCC 49188 B Alphaproteobacteria 5.22 56.1 2 4 CP000759.1 NC_009668.1 07/12/07 07/30/08 DOE Joint Genome Institute T P   D L S G X M F   317 Oenococcus oeni PSU-1 B Firmicutes 1.8 37.9 1 CP000411.1 NC_008528.1 10/13/06 07/20/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 9615 Onion yellows phytoplasma OY-M B Firmicutes 0.86 27.7 1 AP006628.2 NC_005303.1 12/09/03 07/21/08 University of Tokyo, Japan T P C D L S G X M F R 19989 Opitutus terrae PB90-1 B Other Bacteria 6 65.3 1 CP001032.1 NC_010571.1 04/08/08 07/30/08 DOE Joint Genome Institute T P   D L S G X   F   16180 Orientia tsutsugamushi str. Boryong B Alphaproteobacteria 2.1 30.5 1 AM494475.1 NC_009488.1 05/15/07 07/27/08 Seoul National University College of Medicine [more] T P   D L S G X M F R 18983 Orientia tsutsugamushi str. Ikeda B Alphaproteobacteria 2 30.5 1 AP008981.1 NC_010793.1 05/29/08 05/30/08 Kitasato Univ. T P   D L S G X M F R 13485 Parabacteroides distasonis ATCC 8503 B Bacteroidetes/Chlorobi 4.8 45.1 1 CP000140.1 NC_009615.1 06/27/07 07/30/08 Washington University (WashU) T P   D L S G X M F R 13020 Paracoccus denitrificans PD1222 B Alphaproteobacteria 5.25 66.8 2 1 CP000489.1 NC_008686.1 12/13/06 07/24/08 DOE Joint Genome Institute T P   D L S G X   F   17639 Parvibaculum lavamentivorans DS-1 B Alphaproteobacteria 3.9 62.3 1 CP000774.1 NC_009719.1 07/30/07 07/29/08 DOE Joint Genome Institute T P   D L S G X   F R 39 Pasteurella multocida subsp. multocida str. Pm70 B Gammaproteobacteria 2.26 40.4 1 AE004439.1 NC_002663.1 03/15/01 07/22/08 University of Minnesota T P C D L S G X   F R 350 Pectobacterium atrosepticum SCRI1043 B Gammaproteobacteria 5.06 51.0 1 BX950851.1 NC_004547.2 07/21/04 07/20/08 Welcome Trust Sanger Institute T P C D L S G X M F R 398 Pediococcus pentosaceus ATCC 25745 B Firmicutes 1.8 37.4 1 CP000422.1 NC_008525.1 10/13/06 07/23/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X   F R 13337 Pelobacter carbinolicus DSM 2380 B Deltaproteobacteria 3.7 55.1 1 CP000142.2 NC_007498.2 10/12/05 07/25/08 DOE Joint Genome Institute [more] T P C D L S G X M F   13384 Pelobacter propionicus DSM 2379 B Deltaproteobacteria 4.23 58.5 1 2 CP000482.1 NC_008609.1 11/30/06 09/26/08 DOE Joint Genome Institute T P   D L S G X M F   13012 Pelodictyon luteolum DSM 273 B Bacteroidetes/Chlorobi 2.36 57.3 1 CP000096.1 NC_007512.1 10/26/05 07/24/08 DOE Joint Genome Institute T P C D L S G X M F   13011 Pelodictyon phaeoclathratiforme BU-1 B Bacteroidetes/Chlorobi 3 48.1 1 CP001110.1 NC_011060.1 07/18/08 09/22/08 DOE Joint Genome Institute T P   D L S G X M F   19023 Pelotomaculum thermopropionicum SI B Firmicutes 3 53.0 1 AP009389.1 NC_009454.1 05/07/07 07/28/08 Marine Biotechnology Institute Co., Ltd T P   D L S G X   F R 17679 Petrotoga mobilis SJ95 B Thermotogae 2.2 34.1 1 CP000879.1 NC_010003.1 11/16/07 07/29/08 DOE Joint Genome Institute T P   D L S G X   F   19931 Phenylobacterium zucineum HLK1 B Alphaproteobacteria 4.38 71.1 1 1 CP000747.1 NC_011144.1 08/18/08 08/21/08 Zhejiang University, China [more]   P     L S G X M F R 13128 Photobacterium profundum SS9 B Gammaproteobacteria 6.38 41.7 2 1 CR354531.1 NC_006370.1 04/30/04 07/23/08 University of Padova, Italy T P C D L S G X M F R 9605 Photorhabdus luminescens subsp. laumondii TTO1 B Gammaproteobacteria 5.69 42.8 1 BX470251.1 NC_005126.1 10/07/03 07/21/08 Institut Pasteur T P C D L S G X   F R 10641 Picrophilus torridus DSM 9790 A Euryarchaeota 1.5 36.0 1 AE017261.1 NC_005877.1 06/09/04 10/09/08 University of Goettingen T P C D L S G X   F R 13418 Polaromonas naphthalenivorans CJ2 B Betaproteobacteria 5.35 61.7 1 8 CP000529.1 NC_008781.1 01/04/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   13121 Polaromonas sp. JS666 B Betaproteobacteria 5.9 62.0 1 2 CP000316.1 NC_007948.1 04/10/06 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   19991 Polynucleobacter necessarius STIR1 B Betaproteobacteria 1.6 45.6 1 CP001010.1 NC_010531.1 03/28/08 07/30/08 DOE Joint Genome Institute T P   D L S G X M F   16679 Polynucleobacter sp. QLW-P1DMWA-1 B Betaproteobacteria 2.2 44.8 1 CP000655.1 NC_009379.1 04/12/07 07/24/08 DOE Joint Genome Institute T P   D L S G X M F   19051 Porphyromonas gingivalis ATCC 33277 B Bacteroidetes/Chlorobi 2.4 48.4 1 AP009380.1 NC_010729.1 05/20/08 09/22/08 Kitasato Univ. T P   D L S G X M F R 48 Porphyromonas gingivalis W83 B Bacteroidetes/Chlorobi 2.34 48.3 1 AE015924.1 NC_002950.2 09/02/03 07/23/08 TIGR [more] T P C D L S G X M F R 13548 Prochlorococcus marinus str. AS9601 B Cyanobacteria 1.7 31.3 1 CP000551.1 NC_008816.1 01/19/07 07/18/08 J. Craig Venter Institute [more] T P   D L S G X M F   13551 Prochlorococcus marinus str. MIT 9211 B Cyanobacteria 1.7 38.0 1 CP000878.1 NC_009976.1 11/13/07 07/18/08 J. Craig Venter Institute T P   D L S G X M F   18633 Prochlorococcus marinus str. MIT 9215 B Cyanobacteria 1.7 31.1 1 CP000825.1 NC_009840.1 09/20/07 07/18/08 DOE Joint Genome Institute T P   D L S G X M F   15746 Prochlorococcus marinus str. MIT 9301 B Cyanobacteria 1.6 31.3 1 CP000576.1 NC_009091.1 03/05/07 07/19/08 Gordon and Betty Moore Foundation Marine Microbiology Initiative [more] T P   D L S G X M F   13496 Prochlorococcus marinus str. MIT 9303 B Cyanobacteria 2.7 50.0 1 CP000554.1 NC_008820.1 01/22/07 07/17/08 J. Craig Venter Institute [more] T P   D L S G X M F   13910 Prochlorococcus marinus str. MIT 9312 B Cyanobacteria 1.71 31.2 1 CP000111.1 NC_007577.1 11/02/05 07/18/08 DOE Joint Genome Institute T P C D L S G X M F   220 Prochlorococcus marinus str. MIT 9313 B Cyanobacteria 2.41 50.7 1 BX548175.1 NC_005071.1 08/15/03 07/18/08 DOE Joint Genome Institute T P C D L S G X M F R 13617 Prochlorococcus marinus str. MIT 9515 B Cyanobacteria 1.7 30.8 1 CP000552.1 NC_008817.1 01/19/07 07/19/08 J. Craig Venter Institute [more] T P   D L S G X M F   15660 Prochlorococcus marinus str. NATL1A B Cyanobacteria 1.9 35.0 1 CP000553.1 NC_008819.1 01/22/07 07/19/08 J. Craig Venter Institute [more] T P   D L S G X M F   13911 Prochlorococcus marinus str. NATL2A B Cyanobacteria 1.8 35.1 1 CP000095.2 NC_007335.2 08/09/05 07/17/08 DOE Joint Genome Institute T P C D L S G X M F   419 Prochlorococcus marinus subsp. marinus str. CCMP1375 B Cyanobacteria 1.75 36.4 1 AE017126.1 NC_005042.1 08/15/03 07/19/08 CNRS T P C D L S G X M F R 213 Prochlorococcus marinus subsp. pastoris str. CCMP1986 B Cyanobacteria 1.7 30.8 1 BX548174.1 NC_005072.1 08/15/03 07/17/08 DOE Joint Genome Institute T P C D L S G X M F R 12460 Propionibacterium acnes KPA171202 B Actinobacteria 2.56 60.0 1 AE017283.1 NC_006085.1 08/03/04 07/22/08 University of Goettingen T P C D L S G X   F R 12749 Prosthecochloris aestuarii DSM 271 B Bacteroidetes/Chlorobi 2.57 50.1 1 1 CP001108.1 NC_011059.1 07/18/08 09/22/08 DOE Joint Genome Institute T P   D L S G X   F   12624 Proteus mirabilis HI4320 B Gammaproteobacteria 4.14 38.9 1 1 AM942759.1 NC_010554.1 04/03/08 08/28/08 Welcome Trust Sanger Institute   P     L S G X   F R 13454 Pseudoalteromonas atlantica T6c B Gammaproteobacteria 5.19 44.6 1 CP000388.1 NC_008228.1 06/28/06 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   15713 Pseudoalteromonas haloplanktis TAC125 B Gammaproteobacteria 3.84 40.1 2 CR954247.1 NC_007482.1 10/03/05 07/25/08 CNRS [more] T P C D L S G X   F R 16720 Pseudomonas aeruginosa PA7 B Gammaproteobacteria 6.6 66.4 1 CP000744.1 NC_009656.1 07/05/07 07/28/08 J. Craig Venter Institute T P   D L S G X M F   331 Pseudomonas aeruginosa PAO1 B Gammaproteobacteria 6.3 66.6 1 AE004091.2 NC_002516.2 09/13/00 10/07/08 PathoGenesis Corporation T P C D L S G X M F R 386 Pseudomonas aeruginosa UCBPP-PA14 B Gammaproteobacteria 6.54 66.3 1 CP000438.1 NC_008463.1 10/06/06 07/20/08 Massachusetts General Hospital [more] T P   D L S G X M F R 16800 Pseudomonas entomophila L48 B Gammaproteobacteria 5.9 64.2 1 CT573326.1 NC_008027.1 05/10/06 07/28/08 Genoscope T P   D L S G X M F R 327 Pseudomonas fluorescens Pf-5 B Gammaproteobacteria 7.1 63.3 1 CP000076.1 NC_004129.6 06/30/05 09/26/08 TIGR T P C D L S G X M F R 12 Pseudomonas fluorescens Pf0-1 B Gammaproteobacteria 6.4 60.5 1 CP000094.1 NC_007492.1 10/07/05 09/18/08 DOE Joint Genome Institute T P C D L S G X M F   17457 Pseudomonas mendocina ymp B Gammaproteobacteria 5.1 64.7 1 CP000680.1 NC_009439.1 04/20/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13909 Pseudomonas putida F1 B Gammaproteobacteria 6 61.9 1 CP000712.1 NC_009512.1 05/31/07 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   17629 Pseudomonas putida GB-1 B Gammaproteobacteria 6.1 61.9 1 CP000926.1 NC_010322.1 02/05/08 07/18/08 DOE Joint Genome Institute T P   D L S G X M F   267 Pseudomonas putida KT2440 B Gammaproteobacteria 6.18 61.5 1 AE015451.1 NC_002947.3 01/22/03 07/19/08 TIGR T P C D L S G X M F R 17053 Pseudomonas putida W619 B Gammaproteobacteria 5.8 61.4 1 CP000949.1 NC_010501.1 03/11/08 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   16817 Pseudomonas stutzeri A1501 B Gammaproteobacteria 4.6 63.9 1 CP000304.1 NC_009434.1 04/20/07 07/28/08 The Biotechnology Research Institute,The Chinese Academy of Agricultural Sciences T P   D L S G X M F R 12416 Pseudomonas syringae pv. phaseolicola 1448A B Gammaproteobacteria 6.08 57.9 1 2 CP000058.1 NC_005773.3 08/01/05 07/22/08 Cornell University [more] T P C D L S G X M F R 323 Pseudomonas syringae pv. syringae B728a B Gammaproteobacteria 6.09 59.2 1 CP000075.1 NC_007005.1 05/12/05 07/20/08 DOE Joint Genome Institute T P C D L S G X M F R 359 Pseudomonas syringae pv. tomato str. DC3000 B Gammaproteobacteria 6.54 58.3 1 2 AE016853.1 NC_004578.1 08/21/03 07/20/08 TIGR T P C D L S G X M F R 9633 Psychrobacter arcticus 273-4 B Gammaproteobacteria 2.65 42.8 1 CP000082.1 NC_007204.1 07/20/05 07/21/08 DOE Joint Genome Institute T P C D L S G X M F   13920 Psychrobacter cryohalolentis K5 B Gammaproteobacteria 3.1 42.2 1 1 CP000323.1 NC_007969.1 04/18/06 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   15759 Psychrobacter sp. PRwf-1 B Gammaproteobacteria 3.02 44.8 1 2 CP000713.1 NC_009524.1 06/04/07 07/26/08 DOE Joint Genome Institute T P   D L S G X M F   16187 Psychromonas ingrahamii 37 B Gammaproteobacteria 4.6 40.1 1 CP000510.1 NC_008709.1 12/22/06 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   172 Pyrobaculum aerophilum str. IM2 A Crenarchaeota 2.2 51.4 1 AE009441.1 NC_003364.1 01/17/02 07/19/08 UCLA/CalTech T P C D L S G X M F R 15582 Pyrobaculum arsenaticum DSM 13514 A Crenarchaeota 2.1 55.1 1 CP000660.1 NC_009376.1 04/16/07 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   18111 Pyrobaculum calidifontis JCM 11548 A Crenarchaeota 2 57.2 1 CP000561.1 NC_009073.1 02/27/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   16743 Pyrobaculum islandicum DSM 4184 A Crenarchaeota 1.8 49.6 1 CP000504.1 NC_008701.1 12/20/06 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   179 Pyrococcus abyssi GE5 A Euryarchaeota 1.77 44.7 1 1 AL096836.1 NC_000868.1 06/01/01 07/22/08 Genoscope T P C D L S G X M F R 287 Pyrococcus furiosus DSM 3638 A Euryarchaeota 1.9 40.8 1 AE009950.1 NC_003413.1 08/03/99 07/23/08 Utah Genome Center T P C D L S G X M F R 207 Pyrococcus horikoshii OT3 A Euryarchaeota 1.7 41.9 1 BA000001.2 NC_000961.1 07/29/98 07/18/08 NITE T P C D L S G X M F R 13603 Ralstonia eutropha H16 B Betaproteobacteria 7.45 66.3 2 1 AM260480.1 NC_008314.1 08/30/06 07/28/08 University of Goettingen [more] T P   D L S G X M F R 10646 Ralstonia eutropha JMP134 B Betaproteobacteria 7.26 64.4 2 2 CP000091.1 NC_007348.1 08/10/05 07/22/08 DOE Joint Genome Institute T P C D L S G X M F   250 Ralstonia metallidurans CH34 B Betaproteobacteria 6.91 63.5 2 2 CP000352.1 NC_007973.1 04/26/06 07/22/08 DOE Joint Genome Institute T P   D L S G X M F   17631 Ralstonia pickettii 12J B Betaproteobacteria 5.28 63.6 2 1 CP001068.1 NC_010682.1 05/07/08 09/22/08 DOE Joint Genome Institute T P   D L S G X M F   13 Ralstonia solanacearum GMI1000 B Betaproteobacteria 5.8 67.0 1 1 AL646052.1 NC_003295.1 02/02/02 07/22/08 Genoscope T P C D L S G X M F R 19227 Renibacterium salmoninarum ATCC 33209 B Actinobacteria 3.2 56.3 1 CP000910.1 NC_010168.1 12/18/07 07/23/08 Northwest Fisheries Science Center, National Marine Fisheries Service, NOAA [more] T P   D L S G X   F   13932 Rhizobium etli CFN 42 B Alphaproteobacteria 6.53 61.0 1 6 CP000133.1 NC_007761.1 02/01/06 07/25/08 Universidad Nacional Autonoma de Mexico T P   D L S G X M F R 28021 Rhizobium etli CIAT 652 B Alphaproteobacteria 6.44 61.3 1 3 CP001074.1 NC_010994.1 06/19/08 07/30/08 Universidad Nacional Autonoma de Mexico [more] T P   D L S G X M F   344 Rhizobium leguminosarum bv. viciae 3841 B Alphaproteobacteria 7.79 55.0 1 6 AM236080.1 NC_008380.1 09/20/06 07/20/08 Welcome Trust Sanger Institute T P   D L S G X M F R 56 Rhodobacter sphaeroides 2.4.1 B Alphaproteobacteria 4.61 68.8 2 5 CP000144.1 NC_007494.1 10/07/05 07/22/08 DOE Joint Genome Institute [more] T P C D L S G X M F   15755 Rhodobacter sphaeroides ATCC 17025 B Alphaproteobacteria 4.54 68.2 1 5 CP000661.1 NC_009428.1 04/20/07 07/26/08 DOE Joint Genome Institute T P   D L S G X M F   15754 Rhodobacter sphaeroides ATCC 17029 B Alphaproteobacteria 4.42 69.0 2 1 CP000577.1 NC_009049.1 02/23/07 07/26/08 DOE Joint Genome Institute T P   D L S G X M F   13693 Rhodococcus sp. RHA1 B Actinobacteria 9.67 67.0 1 3 CP000431.1 NC_008268.1 07/28/06 07/18/08 University of British Columbia, Canada [more] T P   D L S G X   F R 13908 Rhodoferax ferrireducens T118 B Betaproteobacteria 4.97 59.6 1 1 CP000267.1 NC_007908.1 03/10/06 07/25/08 DOE Joint Genome Institute T P   D L S G X   F   413 Rhodopirellula baltica SH 1 B Planctomycetes 7.1 55.4 1 BX119912.1 NC_005027.1 07/02/03 07/21/08 Max Planck Institute T P C D L S G X   F R 15751 Rhodopseudomonas palustris BisA53 B Alphaproteobacteria 5.51 64.4 1 CP000463.1 NC_008435.1 10/04/06 07/24/08 DOE Joint Genome Institute T P   D L S G X M F   15750 Rhodopseudomonas palustris BisB18 B Alphaproteobacteria 5.51 65.0 1 CP000301.1 NC_007925.1 03/21/06 07/24/08 DOE Joint Genome Institute T P   D L S G X M F   15749 Rhodopseudomonas palustris BisB5 B Alphaproteobacteria 4.89 64.8 1 CP000283.1 NC_007958.1 04/10/06 07/24/08 DOE Joint Genome Institute T P   D L S G X M F   57 Rhodopseudomonas palustris CGA009 B Alphaproteobacteria 5.47 65.0 1 1 BX571963.1 NC_005296.1 01/06/04 07/21/08 DOE Joint Genome Institute T P C D L S G X M F R 15747 Rhodopseudomonas palustris HaA2 B Alphaproteobacteria 5.33 66.0 1 CP000250.1 NC_007778.1 02/06/06 07/24/08 DOE Joint Genome Institute T P   D L S G X M F   20167 Rhodopseudomonas palustris TIE-1 B Alphaproteobacteria 5.7 64.9 1 CP001096.1 NC_011004.1 06/23/08 09/22/08 DOE Joint Genome Institute T P   D L S G X M F   58 Rhodospirillum rubrum ATCC 11170 B Alphaproteobacteria 4.41 65.4 1 1 CP000230.1 NC_007643.1 12/12/05 07/22/08 DOE Joint Genome Institute T P C D L S G X   F   12953 Rickettsia akari str. Hartford B Alphaproteobacteria 1.2 32.3 1 CP000847.1 NC_009881.1 10/02/07 07/23/08 University of Iowa T P   D L S G X M F   17237 Rickettsia bellii OSU 85-389 B Alphaproteobacteria 1.5 31.6 1 CP000849.1 NC_009883.1 10/02/07 07/28/08 University of Iowa T P   D L S G X M F   13996 Rickettsia bellii RML369-C B Alphaproteobacteria 1.52 31.6 1 CP000087.1 NC_007940.1 04/05/06 07/25/08 CNRS T P   D L S G X M F R 12952 Rickettsia canadensis str. McKiel B Alphaproteobacteria 1.2 31.1 1 CP000409.1 NC_009879.1 10/01/07 07/23/08 University of Iowa T P   D L S G X M F   42 Rickettsia conorii str. Malish 7 B Alphaproteobacteria 1.3 32.4 1 AE006914.1 NC_003103.1 10/13/00 07/22/08 CNRS T P C D L S G X M F R 13884 Rickettsia felis URRWXCal2 B Alphaproteobacteria 1.59 32.5 1 2 CP000053.1 NC_007109.1 06/07/05 07/24/08 CNRS T P C D L S G X M F R 18271 Rickettsia massiliae MTU5 B Alphaproteobacteria 1.41 32.5 1 1 CP000683.1 NC_009900.1 10/04/07 07/29/08 CNRS [more] T P   D L S G X M F R 43 Rickettsia prowazekii str. Madrid E B Alphaproteobacteria 1.11 29.0 1 AJ235269.1 NC_000963.1 11/21/98 07/22/08 Uppsala Univ. T P C D L S G X M F R 9636 Rickettsia rickettsii str. 'Sheila Smith' B Alphaproteobacteria 1.3 32.5 1 CP000848.1 NC_009882.1 10/02/07 07/28/08 Institute for Systems Biology [more] T P   D L S G X M F   19943 Rickettsia rickettsii str. Iowa B Alphaproteobacteria 1.3 32.4 1 CP000766.1 NC_010263.1 01/17/08 07/30/08 Rocky Mountain Laboratories, NIAID, NIH [more] T P   D L S G X M F R 10679 Rickettsia typhi str. Wilmington B Alphaproteobacteria 1.11 28.9 1 AE017197.1 NC_006142.1 08/20/04 07/21/08 Baylor College of Medicine T P C D L S G X M F R 13462 Roseiflexus castenholzii DSM 13941 B Chloroflexi 5.7 60.7 1 CP000804.1 NC_009767.1 08/23/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   16190 Roseiflexus sp. RS-1 B Chloroflexi 5.8 60.4 1 CP000686.1 NC_009523.1 06/04/07 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   16426 Roseobacter denitrificans OCh 114 B Alphaproteobacteria 4.3 58.9 1 4 CP000362.1 NC_008209.1 06/22/06 07/28/08 TGen [more] T P   D L S G X M F R 10670 Rubrobacter xylanophilus DSM 9941 B Actinobacteria 3.23 70.5 1 CP000386.1 NC_008148.1 06/09/06 07/22/08 DOE Joint Genome Institute T P   D L S G X   F   316 Saccharophagus degradans 2-40 B Gammaproteobacteria 5.1 45.8 1 CP000282.1 NC_007912.1 03/17/06 10/09/08 DOE Joint Genome Institute T P   D L S G X   F R 18489 Saccharopolyspora erythraea NRRL 2338 B Actinobacteria 8.2 71.1 1 AM420293.1 NC_009142.1 03/21/07 09/26/08 Department of Biochemistry, University of Cambridge T P   D L S G X   F R 16159 Salinibacter ruber DSM 13855 B Bacteroidetes/Chlorobi 3.59 66.1 1 1 CP000159.1 NC_007677.1 12/20/05 07/24/08 TIGR T P C D L S G X   F R 17109 Salinispora arenicola CNS-205 B Actinobacteria 5.8 69.5 1 CP000850.1 NC_009953.1 10/05/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   16342 Salinispora tropica CNB-440 B Actinobacteria 5.2 69.5 1 CP000667.1 NC_009380.1 04/17/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   13030 Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- B Gammaproteobacteria 4.6 51.4 1 CP000880.1 NC_010067.1 11/21/07 09/23/08 Washington University (WashU) T P   D L S G X M F   20063 Salmonella enterica subsp. enterica serovar Agona str. SL483 B Gammaproteobacteria 4.84 52.0 1 1 CP001138.1 NC_011149.1 08/22/08 08/24/08 J. Craig Venter Institute   P     L S G X M F   9618 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 B Gammaproteobacteria 4.99 52.1 1 2 AE017220.1 NC_006905.1 04/01/05 09/23/08 Chang Gung Memorial Hospital T P C D L S G X M F R 19467 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 B Gammaproteobacteria 4.88 52.1 1 1 CP001144.1 NC_011205.1 09/04/08 09/05/08 TIGR   P     L S G X M F   30687 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 B Gammaproteobacteria 4.7 52.2 1 AM933172.1 NC_011294.1 09/25/08 10/01/08 Welcome Trust Sanger Institute   P     L S G X M F R 30689 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 B Gammaproteobacteria 4.7 52.2 1 AM933173.1 NC_011274.1 09/18/08 09/19/08 Welcome Trust Sanger Institute   P     L S G X M F R 20045 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 B Gammaproteobacteria 4.99 52.1 1 2 CP001120.1 NC_011083.1 07/24/08 09/23/08 J. Craig Venter Institute T P   D L S G X M F   18747 Salmonella enterica subsp. enterica serovar Newport str. SL254 B Gammaproteobacteria 4.98 52.2 1 2 CP001113.1 NC_011080.1 07/24/08 09/22/08 TIGR [more] T P   D L S G X M F R 30943 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 B Gammaproteobacteria 4.6 52.2 1 FM200053.1 NC_011147.1 08/19/08 08/29/08 Welcome Trust Sanger Institute [more]   P     L S G X M F   13086 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 B Gammaproteobacteria 4.6 52.2 1 CP000026.1 NC_006511.1 11/09/04 09/23/08 Washington University (WashU) T P C D L S G X M F R 27803 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 B Gammaproteobacteria 4.9 52.1 1 CP000886.1 NC_010102.1 11/30/07 09/23/08 Washington University (WashU) T P   D L S G X M F   19459 Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 B Gammaproteobacteria 4.81 52.2 1 2 CP001127.1 NC_011094.1 07/30/08 09/22/08 TIGR T P   D L S G X M F   236 Salmonella enterica subsp. enterica serovar Typhi str. CT18 B Gammaproteobacteria 5.13 51.9 1 2 AL513382.1 NC_003198.1 10/26/01 09/23/08 Welcome Trust Sanger Institute T P C D L S G X M F R 371 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 B Gammaproteobacteria 4.8 52.1 1 AE014613.1 NC_004631.1 03/20/03 09/23/08 University of Wisconsin-Madison, USA T P C D L S G X M F R 241 Salmonella typhimurium LT2 B Gammaproteobacteria 4.99 52.2 1 1 AE006468.1 NC_003197.1 10/26/01 10/09/08 Washington University (WashU) T P C D L S G X M F R 17459 Serratia proteamaculans 568 B Gammaproteobacteria 5.45 55.0 1 1 CP000826.1 NC_009832.1 09/18/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X   F   13385 Shewanella amazonensis SB2B B Gammaproteobacteria 4.3 53.6 1 CP000507.1 NC_008700.1 12/21/06 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   13386 Shewanella baltica OS155 B Gammaproteobacteria 5.32 46.2 1 4 CP000563.1 NC_009052.1 02/20/07 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   17643 Shewanella baltica OS185 B Gammaproteobacteria 5.28 46.3 1 1 CP000753.1 NC_009665.1 07/10/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   13389 Shewanella baltica OS195 B Gammaproteobacteria 5.5 46.2 1 3 CP000891.1 NC_009997.1 11/21/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   13390 Shewanella denitrificans OS217 B Gammaproteobacteria 4.55 45.1 1 CP000302.1 NC_007954.1 04/10/06 07/24/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13391 Shewanella frigidimarina NCIMB 400 B Gammaproteobacteria 4.85 41.6 1 CP000447.1 NC_008345.1 09/14/06 07/24/08 DOE Joint Genome Institute T P   D L S G X M F   20241 Shewanella halifaxensis HAW-EB4 B Gammaproteobacteria 5.2 44.6 1 CP000931.1 NC_010334.1 02/07/08 07/30/08 DOE Joint Genome Institute T P   D L S G X M F   13906 Shewanella loihica PV-4 B Gammaproteobacteria 4.6 53.7 1 CP000606.1 NC_009092.1 03/07/07 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   335 Shewanella oneidensis MR-1 B Gammaproteobacteria 5.16 45.9 1 1 AE014299.1 NC_004347.1 10/09/02 07/20/08 TIGR T P C D L S G X M F R 17415 Shewanella pealeana ATCC 700345 B Gammaproteobacteria 5.2 44.7 1 CP000851.1 NC_009901.1 10/04/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13393 Shewanella putrefaciens CN-32 B Gammaproteobacteria 4.7 44.5 1 CP000681.1 NC_009438.1 04/20/07 07/24/08 DOE Joint Genome Institute T P   D L S G X M F   18789 Shewanella sediminis HAW-EB3 B Gammaproteobacteria 5.5 46.1 1 CP000821.1 NC_009831.1 09/18/07 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13905 Shewanella sp. ANA-3 B Gammaproteobacteria 5.28 47.9 1 1 CP000469.1 NC_008577.1 11/08/06 07/23/08 DOE Joint Genome Institute T P   D L S G X M F   13904 Shewanella sp. MR-4 B Gammaproteobacteria 4.71 47.9 1 CP000446.1 NC_008321.1 09/01/06 07/18/08 DOE Joint Genome Institute T P   D L S G X M F   13903 Shewanella sp. MR-7 B Gammaproteobacteria 4.8 47.9 1 1 CP000444.1 NC_008322.1 09/01/06 07/18/08 DOE Joint Genome Institute T P   D L S G X M F   13902 Shewanella sp. W3-18-1 B Gammaproteobacteria 4.7 44.6 1 CP000503.1 NC_008750.1 01/03/07 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   17455 Shewanella woodyi ATCC 51908 B Gammaproteobacteria 5.9 43.7 1 CP000961.1 NC_010506.1 03/13/08 07/28/08 DOE Joint Genome Institute [more] T P   D L S G X M F   15637 Shigella boydii CDC 3083-94 B Gammaproteobacteria 4.86 51.0 1 5 CP001063.1 NC_010658.1 05/05/08 07/25/08 TIGR T P   D L S G X M F   13146 Shigella boydii Sb227 B Gammaproteobacteria 4.63 51.1 1 1 CP000036.1 NC_007613.1 11/09/05 07/24/08 Microbial Genome Center of ChMPH T P C D L S G X M F R 13145 Shigella dysenteriae Sd197 B Gammaproteobacteria 4.59 51.0 1 2 CP000034.1 NC_007606.1 11/09/05 07/24/08 Microbial Genome Center of ChMPH T P C D L S G X M F R 408 Shigella flexneri 2a str. 2457T B Gammaproteobacteria 4.6 50.9 1 AE014073.1 NC_004741.1 04/22/03 07/20/08 University of Wisconsin-Madison, USA T P C D L S G X M F R 310 Shigella flexneri 2a str. 301 B Gammaproteobacteria 4.82 50.7 1 1 AE005674.1 NC_004337.1 10/18/02 07/20/08 Microbial Genome Center of ChMPH T P C D L S G X M F R 16375 Shigella flexneri 5 str. 8401 B Gammaproteobacteria 4.6 50.9 1 CP000266.1 NC_008258.1 07/21/06 07/28/08 Microbial Genome Center of ChMPH T P   D L S G X M F R 13151 Shigella sonnei Ss046 B Gammaproteobacteria 5.03 50.8 1 4 CP000038.1 NC_007384.1 08/29/05 07/24/08 Microbial Genome Center of ChMPH T P C D L S G X M F R 281 Silicibacter pomeroyi DSS-3 B Alphaproteobacteria 4.6 64.1 1 1 CP000031.1 NC_003911.11 12/17/04 07/21/08 TIGR [more] T P C D L S G X M F R 13040 Silicibacter sp. TM1040 B Alphaproteobacteria 4.15 60.1 1 2 CP000377.1 NC_008044.1 05/22/06 07/23/08 DOE Joint Genome Institute T P   D L S G X M F R 16304 Sinorhizobium medicae WSM419 B Alphaproteobacteria 6.82 61.1 1 3 CP000738.1 NC_009636.1 06/29/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   19 Sinorhizobium meliloti 1021 B Alphaproteobacteria 6.8 62.2 1 2 AL591688.1 NC_003047.1 07/28/01 08/13/08 MELILO T P C D L S G X M F R 16309 Sodalis glossinidius str. 'morsitans' B Gammaproteobacteria 4.29 54.5 1 3 AP008232.1 NC_007712.1 01/10/06 07/25/08 Kitasato Univ. T P C D L S G X   F R 12638 Solibacter usitatus Ellin6076 B Acidobacteria 10 61.9 1 CP000473.1 NC_008536.1 10/16/06 07/21/08 DOE Joint Genome Institute T P   D L S G X   F   28111 Sorangium cellulosum 'So ce 56' B Deltaproteobacteria 13.03 71.4 1 AM746676.1 NC_010162.1 11/27/07 07/30/08 Bielefeld Univ T P   D L S G X   F R 17343 Sphingomonas wittichii RW1 B Alphaproteobacteria 5.93 67.9 1 2 CP000699.1 NC_009511.1 05/31/07 07/28/08 DOE Joint Genome Institute [more] T P   D L S G X M F   13907 Sphingopyxis alaskensis RB2256 B Alphaproteobacteria 3.37 65.5 1 1 CP000356.1 NC_008048.1 05/18/06 07/24/08 DOE Joint Genome Institute T P   D L S G X   F   63 Staphylococcus aureus RF122 B Firmicutes 2.7 32.8 1 AJ938182.1 NC_007622.1 11/24/05 07/23/08 University of Minnesota T P C D L S G X M F R 238 Staphylococcus aureus subsp. aureus COL B Firmicutes 2.81 32.8 1 1 CP000046.1 NC_002951.2 01/13/05 07/18/08 TIGR T P C D L S G X M F R 15758 Staphylococcus aureus subsp. aureus JH1 B Firmicutes 2.93 32.9 1 1 CP000736.1 NC_009632.1 06/28/07 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   15757 Staphylococcus aureus subsp. aureus JH9 B Firmicutes 2.93 32.9 1 1 CP000703.1 NC_009487.1 05/18/07 07/27/08 DOE Joint Genome Institute T P   D L S G X M F   265 Staphylococcus aureus subsp. aureus MRSA252 B Firmicutes 2.9 32.8 1 BX571856.1 NC_002952.2 06/24/04 07/23/08 Welcome Trust Sanger Institute T P C D L S G X M F R 266 Staphylococcus aureus subsp. aureus MSSA476 B Firmicutes 2.82 32.8 1 1 BX571857.1 NC_002953.3 06/24/04 07/23/08 Welcome Trust Sanger Institute T P C D L S G X M F R 306 Staphylococcus aureus subsp. aureus MW2 B Firmicutes 2.8 32.8 1 BA000033.2 NC_003923.1 06/05/02 07/20/08 NITE T P C D L S G X M F R 18509 Staphylococcus aureus subsp. aureus Mu3 B Firmicutes 2.9 32.9 1 AP009324.1 NC_009782.1 09/03/07 07/29/08 Juntendo Univ. T P   D L S G X M F R 263 Staphylococcus aureus subsp. aureus Mu50 B Firmicutes 2.93 32.8 1 1 BA000017.4 NC_002758.2 06/22/01 07/19/08 Juntendo Univ. T P C D L S G X M F R 264 Staphylococcus aureus subsp. aureus N315 B Firmicutes 2.82 32.8 1 1 BA000018.3 NC_002745.2 06/22/01 07/19/08 Juntendo Univ. [more] T P C D L S G X M F R 237 Staphylococcus aureus subsp. aureus NCTC 8325 B Firmicutes 2.8 32.9 1 CP000253.1 NC_007795.1 02/13/06 07/18/08 University of Oklahoma T P   D L S G X M F   16313 Staphylococcus aureus subsp. aureus USA300 B Firmicutes 2.94 32.7 1 3 CP000255.1 NC_007793.1 02/10/06 07/28/08 University of California, San Francisco T P   D L S G X M F R 19489 Staphylococcus aureus subsp. aureus USA300_TCH1516 B Firmicutes 2.93 32.7 1 1 CP000730.1 NC_010079.1 11/16/07 07/30/08 Baylor College of Medicine [more] T P   D L S G X M F R 18801 Staphylococcus aureus subsp. aureus str. Newman B Firmicutes 2.9 32.9 1 AP009351.1 NC_009641.1 07/02/07 07/29/08 Juntendo Univ. T P   D L S G X M F R 279 Staphylococcus epidermidis ATCC 12228 B Firmicutes 2.56 32.0 1 6 AE015929.1 NC_004461.1 09/03/03 07/19/08 Chinese National HGC, Shanghai T P C D L S G X M F R 64 Staphylococcus epidermidis RP62A B Firmicutes 2.64 32.1 1 1 CP000029.1 NC_002976.3 01/18/05 07/23/08 TIGR T P C D L S G X M F R 12508 Staphylococcus haemolyticus JCSC1435 B Firmicutes 2.7 32.8 1 AP006716.1 NC_007168.1 06/30/05 07/23/08 NITE T P C D L S G X M F R 15596 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 B Firmicutes 2.56 33.2 1 2 AP008934.1 NC_007350.1 08/12/05 07/25/08 Kitasato Univ. T P C D L S G X M F R 17449 Staphylothermus marinus F1 A Crenarchaeota 1.6 35.7 1 CP000575.1 NC_009033.1 02/21/07 07/29/08 DOE Joint Genome Institute T P   D L S G X   F   30351 Stenotrophomonas maltophilia K279a B Gammaproteobacteria 4.85 66.3 1 AM743169.1 NC_010943.1 06/10/08 06/20/08 Welcome Trust Sanger Institute T P   D L S G X M F R 17107 Stenotrophomonas maltophilia R551-3 B Gammaproteobacteria 4.6 66.3 1 CP001111.1 NC_011071.1 07/21/08 09/22/08 DOE Joint Genome Institute T P   D L S G X M F   330 Streptococcus agalactiae 2603V/R B Firmicutes 2.2 35.6 1 AE009948.1 NC_004116.1 08/30/02 07/20/08 TIGR T P C D L S G X M F R 326 Streptococcus agalactiae A909 B Firmicutes 2.13 35.6 1 CP000114.1 NC_007432.1 09/29/05 07/20/08 TIGR T P C D L S G X M F R 334 Streptococcus agalactiae NEM316 B Firmicutes 2.2 35.6 1 AL732656.1 NC_004368.1 10/02/02 07/20/08 Institut Pasteur T P C D L S G X M F R 30781 Streptococcus equi subsp. zooepidemicus MGCS10565 B Firmicutes 2 41.8 1 CP001129.1 NC_011134.1 08/11/08 09/30/08 The Methodist Hospital Research Institute [more]   P     L S G X M F R 66 Streptococcus gordonii str. Challis substr. CH1 B Firmicutes 2.2 40.5 1 CP000725.1 NC_009785.1 09/11/07 07/30/08 TIGR T P   D L S G X M F R 333 Streptococcus mutans UA159 B Firmicutes 2.03 36.8 1 AE014133.1 NC_004350.1 10/25/02 07/20/08 University of Oklahoma T P C D L S G X M F R 29179 Streptococcus pneumoniae CGSP14 B Firmicutes 2.2 39.5 1 CP001033.1 NC_010582.1 04/11/08 07/30/08 Beijing Institute of Genomics T P   D L S G X M F   16374 Streptococcus pneumoniae D39 B Firmicutes 2 39.7 1 CP000410.1 NC_008533.1 10/12/06 07/28/08 TIGR T P   D L S G X M F R 29047 Streptococcus pneumoniae G54 B Firmicutes 2.1 39.6 1 CP001015.1 NC_011072.1 07/22/08 09/22/08 Institute for Genome Sciences T P   D L S G X M F R 28035 Streptococcus pneumoniae Hungary19A-6 B Firmicutes 2.2 39.6 1 CP000936.1 NC_010380.1 02/27/08 07/30/08 J. Craig Venter Institute T P   D L S G X M F   278 Streptococcus pneumoniae R6 B Firmicutes 2.04 39.7 1 AE007317.1 NC_003098.1 09/07/01 07/19/08 Eli Lilly and Company T P C D L S G X M F R 277 Streptococcus pneumoniae TIGR4 B Firmicutes 2.2 39.7 1 AE005672.3 NC_003028.3 07/21/01 07/19/08 TIGR T P C D L S G X M F R 269 Streptococcus pyogenes M1 GAS B Firmicutes 1.9 38.5 1 AE004092.1 NC_002737.1 04/11/01 07/19/08 University of Oklahoma T P C D L S G X M F R 16364 Streptococcus pyogenes MGAS10270 B Firmicutes 1.9 38.4 1 CP000260.1 NC_008022.1 05/04/06 07/28/08 Lab of Human Bacterial Pathogenesis [more] T P   D L S G X M F R 12469 Streptococcus pyogenes MGAS10394 B Firmicutes 1.9 38.7 1 CP000003.1 NC_006086.1 07/24/04 07/23/08 Lab of Human Bacterial Pathogenesis T P C D L S G X M F R 16366 Streptococcus pyogenes MGAS10750 B Firmicutes 1.94 38.3 1 CP000262.1 NC_008024.1 05/04/06 09/22/08 Lab of Human Bacterial Pathogenesis [more] T P   D L S G X M F R 16365 Streptococcus pyogenes MGAS2096 B Firmicutes 1.86 38.7 1 CP000261.1 NC_008023.1 05/04/06 07/28/08 Lab of Human Bacterial Pathogenesis [more] T P   D L S G X M F R 311 Streptococcus pyogenes MGAS315 B Firmicutes 1.9 38.6 1 AE014074.1 NC_004070.1 07/18/02 07/20/08 Lab of Human Bacterial Pathogenesis T P C D L S G X M F R 13888 Streptococcus pyogenes MGAS5005 B Firmicutes 1.84 38.5 1 CP000017.1 NC_007297.1 08/05/05 07/23/08 Lab of Human Bacterial Pathogenesis [more] T P C D L S G X M F R 13887 Streptococcus pyogenes MGAS6180 B Firmicutes 1.9 38.4 1 CP000056.1 NC_007296.1 08/04/05 07/24/08 Lab of Human Bacterial Pathogenesis [more] T P C D L S G X M F R 286 Streptococcus pyogenes MGAS8232 B Firmicutes 1.9 38.5 1 AE009949.1 NC_003485.1 03/28/02 09/29/08 Lab of Human Bacterial Pathogenesis T P C D L S G X M F R 16363 Streptococcus pyogenes MGAS9429 B Firmicutes 1.84 38.5 1 CP000259.1 NC_008021.1 05/04/06 07/28/08 Lab of Human Bacterial Pathogenesis [more] T P   D L S G X M F R 301 Streptococcus pyogenes SSI-1 B Firmicutes 1.9 38.6 1 BA000034.2 NC_004606.1 06/12/03 07/20/08 Osaka Univ. T P C D L S G X M F R 270 Streptococcus pyogenes str. Manfredo B Firmicutes 1.8 38.6 1 AM295007.1 NC_009332.1 03/29/07 07/19/08 Welcome Trust Sanger Institute T P   D L S G X M F R 13942 Streptococcus sanguinis SK36 B Firmicutes 2.4 43.4 1 CP000387.1 NC_009009.1 02/09/07 07/28/08 Virginia Commonwealth University T P   D L S G X M F R 17153 Streptococcus suis 05ZYH33 B Firmicutes 2.1 41.1 1 CP000407.1 NC_009442.1 04/24/07 07/28/08 Chinese Academy of Sciences T P   D L S G X M F R 17155 Streptococcus suis 98HAH33 B Firmicutes 2.1 41.1 1 CP000408.1 NC_009443.1 04/24/07 07/28/08 Chinese Academy of Sciences T P   D L S G X M F R 13163 Streptococcus thermophilus CNRZ1066 B Firmicutes 1.8 39.1 1 CP000024.1 NC_006449.1 11/16/04 07/24/08 Institut National de la Recherche Agronomique (INRA) T P C D L S G X M F R 13773 Streptococcus thermophilus LMD-9 B Firmicutes 1.91 39.1 1 2 CP000419.1 NC_008532.1 10/13/06 07/25/08 DOE Joint Genome Institute/Fidelity Systems T P   D L S G X M F R 13162 Streptococcus thermophilus LMG 18311 B Firmicutes 1.8 39.1 1 CP000023.1 NC_006448.1 11/15/04 07/22/08 University of Catholique de Louvain, Belgium [more] T P C D L S G X M F R 189 Streptomyces avermitilis MA-4680 B Actinobacteria 9.09 70.7 1 1 BA000030.3 NC_003155.4 09/27/01 07/21/08 NITE T P C D L S G X M F R 242 Streptomyces coelicolor A3(2) B Actinobacteria 9.09 72.0 1 2 AL645882.2 NC_003888.3 07/01/96 09/26/08 Welcome Trust Sanger Institute T P C D L S G X M F R 20085 Streptomyces griseus subsp. griseus NBRC 13350 B Actinobacteria 8.5 72.2 1 AP009493.1 NC_010572.1 04/08/08 07/30/08 University of Tokyo, Japan T P   D L S G X M F R 13935 Sulfolobus acidocaldarius DSM 639 A Crenarchaeota 2.23 36.7 1 CP000077.1 NC_007181.1 07/05/05 07/25/08 University of Copenhagen T P C D L S G X M F R 108 Sulfolobus solfataricus P2 A Crenarchaeota 3 35.8 1 AE006641.1 NC_002754.1 06/28/01 07/23/08 European/Canadian Consortium T P C D L S G X M F R 246 Sulfolobus tokodaii str. 7 A Crenarchaeota 2.7 32.8 1 BA000023.2 NC_003106.2 09/27/01 07/23/08 NITE T P C D L S G X M F R 18889 Sulfurihydrogenibium sp. YO3AOP1 B Aquificae 1.8 32.0 1 CP001080.1 NC_010730.1 05/21/08 09/22/08 DOE Joint Genome Institute T P   D L S G X   F   13019 Sulfurimonas denitrificans DSM 1251 B Epsilonproteobacteria 2.2 34.5 1 CP000153.1 NC_007575.1 11/01/05 07/25/08 DOE Joint Genome Institute T P C D L S G X   F R 18965 Sulfurovum sp. NBC37-1 B Epsilonproteobacteria 2.6 43.9 1 AP009179.1 NC_009663.1 07/11/07 07/28/08 Japan Agency for Marine-Earth Science and Technology T P   D L S G X   F R 12994 Symbiobacterium thermophilum IAM 14863 B Firmicutes 3.6 68.7 1 AP006840.1 NC_006177.1 09/24/04 07/23/08 Kitasato Univ. T P C D L S G X   F R 13282 Synechococcus elongatus PCC 6301 B Cyanobacteria 2.7 55.5 1 AP008231.1 NC_006576.1 12/21/04 07/22/08 Nagoya University, Japan T P C D L S G X M F R 10645 Synechococcus elongatus PCC 7942 B Cyanobacteria 2.75 55.4 1 1 CP000100.1 NC_007604.1 03/10/04 07/17/08 DOE Joint Genome Institute T P C D L S G X M F   12530 Synechococcus sp. CC9311 B Cyanobacteria 2.61 52.4 1 CP000435.1 NC_008319.1 09/01/06 07/18/08 TIGR T P   D L S G X M F R 13643 Synechococcus sp. CC9605 B Cyanobacteria 2.51 59.2 1 CP000110.1 NC_007516.1 10/27/05 07/18/08 DOE Joint Genome Institute T P C D L S G X M F   13655 Synechococcus sp. CC9902 B Cyanobacteria 2.2 54.2 1 CP000097.1 NC_007513.1 10/26/05 10/09/08 DOE Joint Genome Institute T P C D L S G X M F   16252 Synechococcus sp. JA-2-3B'a(2-13) B Cyanobacteria 3.05 58.5 1 CP000240.1 NC_007776.1 02/06/06 07/24/08 TIGR T P   D L S G X M F R 16251 Synechococcus sp. JA-3-3Ab B Cyanobacteria 2.93 60.2 1 CP000239.1 NC_007775.1 02/06/06 07/24/08 TIGR T P   D L S G X M F R 28247 Synechococcus sp. PCC 7002 B Cyanobacteria 3.4 49.2 1 6 CP000951.1 NC_010475.1 03/14/08 07/17/08 Penn State Univ. [more] T P   D L S G X M F   13654 Synechococcus sp. RCC307 B Cyanobacteria 2.2 60.8 1 CT978603.1 NC_009482.1 05/19/07 07/24/08 Genoscope [more] T P   D L S G X M F   13642 Synechococcus sp. WH 7803 B Cyanobacteria 2.4 60.2 1 CT971583.1 NC_009481.1 05/19/07 07/17/08 Genoscope [more] T P   D L S G X M F   230 Synechococcus sp. WH 8102 B Cyanobacteria 2.43 59.4 1 BX548020.1 NC_005070.1 08/15/03 07/18/08 DOE Joint Genome Institute [more] T P C D L S G X M F R 60 Synechocystis sp. PCC 6803 B Cyanobacteria 3.94 47.4 1 4 BA000022.2 NC_000911.1 08/31/95 07/17/08 Kazusa T P C D L S G X   F R 13013 Syntrophobacter fumaroxidans MPOB B Deltaproteobacteria 5 59.9 1 CP000478.1 NC_008554.1 10/26/06 07/25/08 DOE Joint Genome Institute T P   D L S G X   F   13014 Syntrophomonas wolfei subsp. wolfei str. Goettingen B Other Bacteria 2.94 44.9 1 CP000448.1 NC_008346.1 09/14/06 07/25/08 DOE Joint Genome Institute T P   D L S G X   F   16258 Syntrophus aciditrophicus SB B Deltaproteobacteria 3.2 51.5 1 CP000252.1 NC_007759.1 01/26/06 07/17/08 Integrated Genomics T P   D L S G X   F R 13901 Thermoanaerobacter pseudethanolicus ATCC 33223 B Firmicutes 2.4 34.5 1 CP000924.1 NC_010321.1 02/05/08 07/25/08 DOE Joint Genome Institute T P   D L S G X M F   16394 Thermoanaerobacter sp. X514 B Firmicutes 2.5 34.5 1 CP000923.1 NC_010320.1 02/05/08 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   249 Thermoanaerobacter tengcongensis MB4 B Firmicutes 2.69 37.6 1 AE008691.1 NC_003869.1 05/09/02 07/23/08 Beijing Center.HGP T P C D L S G X M F R 94 Thermobifida fusca YX B Actinobacteria 3.6 67.5 1 CP000088.1 NC_007333.1 08/08/05 07/22/08 DOE Joint Genome Institute T P C D L S G X   F R 13213 Thermococcus kodakarensis KOD1 A Euryarchaeota 2.09 52.0 1 AP006878.1 NC_006624.1 01/13/05 07/18/08 Kyoto University, Japan [more] T P C D L S G X M F R 30733 Thermodesulfovibrio yellowstonii DSM 11347 B Other Bacteria 2 34.1 1 CP001147.1 NC_011296.1 09/26/08 09/26/08 J. Craig Venter Institute [more]   P     L S G X   F   16331 Thermofilum pendens Hrk 5 A Crenarchaeota 1.83 57.6 1 1 CP000505.1 NC_008698.1 12/18/06 07/28/08 DOE Joint Genome Institute T P   D L S G X   F   110 Thermoplasma acidophilum DSM 1728 A Euryarchaeota 1.6 46.0 1 AL139299.1 NC_002578.1 10/12/00 07/23/08 Max Planck Institute T P C D L S G X M F R 206 Thermoplasma volcanium GSS1 A Euryarchaeota 1.58 39.9 1 BA000011.4 NC_002689.2 12/20/00 07/23/08 National Institute of Advanced Industrial Science and Technology, Japan T P C D L S G X M F R 15645 Thermoproteus neutrophilus V24Sta A Crenarchaeota 1.8 59.9 1 CP001014.1 NC_010525.1 03/27/08 07/30/08 DOE Joint Genome Institute T P   D L S G X M F   17249 Thermosipho melanesiensis BI429 B Thermotogae 1.9 31.4 1 CP000716.1 NC_009616.1 06/26/07 07/28/08 DOE Joint Genome Institute T P   D L S G X   F   308 Thermosynechococcus elongatus BP-1 B Cyanobacteria 2.59 53.9 1 BA000039.2 NC_004113.1 09/21/02 07/20/08 Kazusa T P C D L S G X   F R 15644 Thermotoga lettingae TMO B Thermotogae 2.1 38.7 1 CP000812.1 NC_009828.1 09/18/07 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   111 Thermotoga maritima MSB8 B Thermotogae 1.86 46.2 1 AE000512.1 NC_000853.1 06/09/99 07/21/08 TIGR T P C D L S G X M F R 17089 Thermotoga petrophila RKU-1 B Thermotogae 1.8 46.1 1 CP000702.1 NC_009486.1 05/18/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   19543 Thermotoga sp. RQ2 B Thermotogae 1.9 46.2 1 CP000969.1 NC_010483.1 03/18/08 07/18/08 DOE Joint Genome Institute T P   D L S G X M F   10617 Thermus thermophilus HB27 B Deinococcus-Thermus 2.13 69.4 1 1 AE017221.1 NC_005835.1 04/06/04 07/21/08 University of Goettingen T P C D L S G X M F R 13202 Thermus thermophilus HB8 B Deinococcus-Thermus 2.07 69.5 1 2 AP008226.1 NC_006461.1 04/05/04 07/24/08 National Institute of Advanced Industrial Science and Technology, Japan T P C D L S G X M F   13025 Thiobacillus denitrificans ATCC 25259 B Betaproteobacteria 2.91 66.1 1 CP000116.1 NC_007404.1 09/01/05 07/23/08 DOE Joint Genome Institute T P C D L S G X   F R 13018 Thiomicrospira crunogena XCL-2 B Gammaproteobacteria 2.4 43.1 1 CP000109.2 NC_007520.2 10/31/05 07/24/08 DOE Joint Genome Institute T P C D L S G X   F R 4 Treponema denticola ATCC 35405 B Spirochaetes 2.8 37.9 1 AE017226.1 NC_002967.9 04/06/04 07/21/08 TIGR [more] T P C D L S G X M F R 20067 Treponema pallidum subsp. pallidum SS14 B Spirochaetes 1.1 52.8 1 CP000805.1 NC_010741.1 05/22/08 09/22/08 Baylor College of Medicine [more] T P   D L S G X M F R 5 Treponema pallidum subsp. pallidum str. Nichols B Spirochaetes 1.14 52.8 1 AE000520.1 NC_000919.1 07/17/98 07/21/08 TIGR [more] T P C D L S G X M F R 318 Trichodesmium erythraeum IMS101 B Cyanobacteria 7.8 34.1 1 CP000393.1 NC_008312.1 07/06/06 07/20/08 DOE Joint Genome Institute T P   D L S G X   F   354 Tropheryma whipplei TW08/27 B Actinobacteria 0.93 46.3 1 BX072543.1 NC_004551.1 02/28/03 07/20/08 Welcome Trust Sanger Institute T P C D L S G X M F R 95 Tropheryma whipplei str. Twist B Actinobacteria 0.93 46.3 1 AE014184.1 NC_004572.3 08/07/03 07/20/08 Genoscope T P C D L S G X M F R 19087 Ureaplasma parvum serovar 3 str. ATCC 27815 B Firmicutes 0.75 25.5 1 CP000942.1 NC_010503.1 02/26/08 07/30/08 TIGR T P   D L S G X M F   101 Ureaplasma parvum serovar 3 str. ATCC 700970 B Firmicutes 0.75 25.5 1 AF222894.1 NC_002162.1 10/26/00 09/22/08 University of Alabama at Birmingham T P C D L S G X M F R 17187 Verminephrobacter eiseniae EF01-2 B Betaproteobacteria 5.63 65.2 1 1 CP000542.1 NC_008786.1 01/09/07 07/28/08 DOE Joint Genome Institute [more] T P   D L S G X   F   36 Vibrio cholerae O1 biovar El Tor str. N16961 B Gammaproteobacteria 4.03 47.5 2 AE003852.1 NC_002505.1 08/22/00 07/21/08 TIGR T P C D L S G X M F R 15667 Vibrio cholerae O395 B Gammaproteobacteria 4.1 47.5 2 CP000626.1 NC_009456.1 05/08/07 07/25/08 TIGR [more] T P   D L S G X M F   12986 Vibrio fischeri ES114 B Gammaproteobacteria 4.25 38.3 2 1 CP000020.2 NC_006840.2 02/11/05 07/24/08 Integrated Genomics [more] T P C D L S G X M F R 19393 Vibrio fischeri MJ11 B Gammaproteobacteria 4.48 38.2 2 1 CP001133.1 NC_011186.1 08/28/08 08/29/08 J. Craig Venter Institute   P     L S G X M F   19857 Vibrio harveyi ATCC BAA-1116 B Gammaproteobacteria 6.09 45.4 2 1 CP000789.1 NC_009783.1 08/28/07 09/24/08 Washington University (WashU) T P   D L S G X M F   360 Vibrio parahaemolyticus RIMD 2210633 B Gammaproteobacteria 5.17 45.4 2 BA000031.2 NC_004603.1 06/02/00 07/21/08 Osaka Univ. T P C D L S G X M F R 349 Vibrio vulnificus CMCP6 B Gammaproteobacteria 5.1 46.7 2 AE016795.2 NC_004459.2 09/23/03 09/24/08 Chonnam Univ. T P C D L S G X M F R 1430 Vibrio vulnificus YJ016 B Gammaproteobacteria 5.26 46.7 2 1 BA000037.2 NC_005139.1 12/06/03 07/20/08 NHRI, China T P C D L S G X M F R 274 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis B Gammaproteobacteria 0.7 22.5 1 1 BA000021.3 NC_004344.2 09/10/02 07/17/08 Yale Univ. T P C D L S G X   F R 272 Wolbachia endosymbiont of Drosophila melanogaster B Alphaproteobacteria 1.27 35.2 1 AE017196.1 NC_002978.6 02/11/04 07/19/08 TIGR T P C D L S G X M F R 12475 Wolbachia endosymbiont strain TRS of Brugia malayi B Alphaproteobacteria 1.08 34.2 1 AE017321.1 NC_006833.1 02/02/05 07/23/08 New England Biolabs, Inc. [more] T P C D L S G X M F R 30313 Wolbachia pipientis B Alphaproteobacteria 1.48 34.2 1 AM999887.1 NC_010981.1 06/13/08 06/17/08 Welcome Trust Sanger Institute T P   D L S G X M F R 445 Wolinella succinogenes DSM 1740 B Epsilonproteobacteria 2.1 48.5 1 BX571656.1 NC_005090.1 09/23/03 07/23/08 Max Planck Institute T P C D L S G X   F R 15756 Xanthobacter autotrophicus Py2 B Alphaproteobacteria 5.62 67.3 1 1 CP000781.1 NC_009720.1 07/30/07 07/18/08 DOE Joint Genome Institute T P   D L S G X M F   297 Xanthomonas axonopodis pv. citri str. 306 B Gammaproteobacteria 5.27 64.7 1 2 AE008923.1 NC_003919.1 05/25/02 07/19/08 Sao Paulo state (Brazil) Consortium T P C D L S G X M F R 15 Xanthomonas campestris pv. campestris str. 8004 B Gammaproteobacteria 5.15 65.0 1 CP000050.1 NC_007086.1 05/25/05 09/22/08 Chinese National HGC, Shanghai T P C D L S G X M F R 296 Xanthomonas campestris pv. campestris str. ATCC 33913 B Gammaproteobacteria 5.08 65.1 1 AE008922.1 NC_003902.1 05/25/02 07/19/08 Sao Paulo state (Brazil) Consortium T P C D L S G X M F R 29801 Xanthomonas campestris pv. campestris str. B100 B Gammaproteobacteria 5.1 65.0 1 AM920689.1 NC_010688.1 02/12/08 10/15/08 Bielefeld Univ T P   D L S G X M F R 13649 Xanthomonas campestris pv. vesicatoria str. 85-10 B Gammaproteobacteria 5.42 64.6 1 4 AM039952.1 NC_007508.1 10/21/05 07/24/08 Bielefeld Univ [more] T P C D L S G X M F R 12931 Xanthomonas oryzae pv. oryzae KACC10331 B Gammaproteobacteria 4.9 63.7 1 AE013598.1 NC_006834.1 02/02/05 07/23/08 NIAB T P C D L S G X M F R 16297 Xanthomonas oryzae pv. oryzae MAFF 311018 B Gammaproteobacteria 4.9 63.7 1 AP008229.1 NC_007705.1 01/04/06 09/15/08 National Institute of Agrobiological Sciences, Japan T P   D L S G X M F   28127 Xanthomonas oryzae pv. oryzae PXO99A B Gammaproteobacteria 5.2 63.6 1 CP000967.1 NC_010717.1 05/16/08 09/22/08 Center for Bioinformatics and Computational Biology T P   D L S G X M F R 271 Xylella fastidiosa 9a5c B Gammaproteobacteria 2.73 52.6 1 2 AE003849.1 NC_002488.3 07/26/00 07/19/08 Sao Paulo state (Brazil) Consortium T P C D L S G X M F R 17823 Xylella fastidiosa M12 B Gammaproteobacteria 2.5 51.9 1 CP000941.1 NC_010513.1 02/19/08 07/29/08 DOE Joint Genome Institute [more] T P   D L S G X M F   18457 Xylella fastidiosa M23 B Gammaproteobacteria 2.54 51.7 1 1 CP001011.1 NC_010577.1 04/11/08 07/29/08 DOE Joint Genome Institute T P   D L S G X M F   285 Xylella fastidiosa Temecula1 B Gammaproteobacteria 2.52 51.8 1 1 AE009442.1 NC_004556.1 01/21/03 09/22/08 Sao Paulo state (Brazil) Consortium T P C D L S G X M F R 190 Yersinia enterocolitica subsp. enterocolitica 8081 B Gammaproteobacteria 4.67 47.2 1 1 AM286415.1 NC_008800.1 01/12/07 07/28/08 Welcome Trust Sanger Institute T P   D L S G X M F R 16067 Yersinia pestis Angola B Gammaproteobacteria 4.68 47.6 1 2 CP000901.1 NC_010159.1 12/12/07 09/24/08 TIGR T P   D L S G X M F   16645 Yersinia pestis Antiqua B Gammaproteobacteria 4.88 47.7 1 3 CP000308.1 NC_008150.1 06/09/06 07/27/08 DOE Joint Genome Institute T P   D L S G X M F R 34 Yersinia pestis CO92 B Gammaproteobacteria 4.88 47.6 1 3 AL590842.1 NC_003143.1 10/05/01 07/20/08 Welcome Trust Sanger Institute T P C D L S G X M F R 288 Yersinia pestis KIM B Gammaproteobacteria 4.7 47.7 1 1 AE009952.1 NC_004088.1 07/27/02 07/19/08 University of Wisconsin-Madison, USA [more] T P C D L S G X M F R 16646 Yersinia pestis Nepal516 B Gammaproteobacteria 4.61 47.6 1 2 CP000305.1 NC_008149.1 06/09/06 07/28/08 DOE Joint Genome Institute T P   D L S G X M F R 16700 Yersinia pestis Pestoides F B Gammaproteobacteria 4.71 47.7 1 2 CP000668.1 NC_009381.1 04/13/07 07/28/08 DOE Joint Genome Institute T P   D L S G X M F   10638 Yersinia pestis biovar Microtus str. 91001 B Gammaproteobacteria 4.81 47.7 1 4 AE017042.1 NC_005810.1 06/04/04 09/24/08 Academy of Military Medical Sciences, The Institute of Microbiology and Epidemiology, China T P C D L S G X M F R 16070 Yersinia pseudotuberculosis IP 31758 B Gammaproteobacteria 4.91 47.2 1 2 CP000720.1 NC_009708.1 07/23/07 07/26/08 TIGR T P   D L S G X M F R 12950 Yersinia pseudotuberculosis IP 32953 B Gammaproteobacteria 4.8 47.6 1 2 BX936398.1 NC_006155.1 09/11/04 07/23/08 Lawrence Livermore National Laboratory [more] T P C D L S G X M F R 28745 Yersinia pseudotuberculosis PB1/+ B Gammaproteobacteria 4.77 47.5 1 1 CP001048.1 NC_010634.1 04/25/08 07/30/08 DOE Joint Genome Institute [more] T P   D L S G X M F   28743 Yersinia pseudotuberculosis YPIII B Gammaproteobacteria 4.7 47.5 1 CP000950.1 NC_010465.1 03/11/08 07/30/08 DOE Joint Genome Institute [more] T P   D L S G X M F   12354 Zymomonas mobilis subsp. mobilis ZM4 B Alphaproteobacteria 2.06 46.3 1 AE008692.1 NC_006526.1 12/12/04 07/22/08 Macrogen Inc. T P C D L S G X   F R 19641 uncultured methanogenic archaeon RC-I A Euryarchaeota 3.2 54.6 1 AM114193.2 NC_009464.1 07/21/06 07/28/08 Max Planck Institute T P   D L S G X   F R