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Volume 144(3);  July 2007
High Impact
Protein S-Nitrosylation: Potential Targets and Roles in Signal Transduction
Aleel K. Grennan
Plant Physiol. 2007 July; 144(3): 1237–1239. doi: 10.1104/pp.104.900228.
PMCID: PMC1914129
Update
Mechanisms of Cross Talk between Gibberellin and Other Hormones
David Weiss and Naomi Ori
Plant Physiol. 2007 July; 144(3): 1240–1246. doi: 10.1104/pp.107.100370.
PMCID: PMC1914132
On the Inside
On the Inside
Peter V. Minorsky
Plant Physiol. 2007 July; 144(3): 1235–1236. doi: 10.1104/pp.104.900230.
PMCID: PMC1914125
Breakthrough Technologies
High-Throughput, High-Sensitivity Analysis of Gene Expression in Arabidopsis
Richard Martin Kris, Stephen Felder, Michael Deyholos, Georgina M. Lambert, James Hinton, Ihab Botros, Ralph Martel, Bruce Seligmann, and David W. Galbraith
Plant Physiol. 2007 July; 144(3): 1256–1266. doi: 10.1104/pp.107.098681.
PMCID: PMC1914134
Genome Analysis
Distinct Expression Patterns of Natural Antisense Transcripts in Arabidopsis
Stefan R. Henz, Jason S. Cumbie, Kristin D. Kasschau, Jan U. Lohmann, James C. Carrington, Detlef Weigel, and Markus Schmid
Plant Physiol. 2007 July; 144(3): 1247–1255. doi: 10.1104/pp.107.100396.
PMCID: PMC1914114
Research Articles
Biochemical Processes and Macromolecular Structures
Monoacylglycerols Are Components of Root Waxes and Can Be Produced in the Aerial Cuticle by Ectopic Expression of a Suberin-Associated Acyltransferase
Yonghua Li, Fred Beisson, John Ohlrogge, and Mike Pollard
Plant Physiol. 2007 July; 144(3): 1267–1277. doi: 10.1104/pp.107.099432.
PMCID: PMC1914122
Inositol 1,3,4,5,6-Pentakisphosphate 2-Kinase from Maize: Molecular and Biochemical Characterization
Yuejin Sun, Mark Thompson, Gaofeng Lin, Holly Butler, Zhifang Gao, Scott Thornburgh, Kerrm Yau, Doug A. Smith, and Vipula K. Shukla
Plant Physiol. 2007 July; 144(3): 1278–1291. doi: 10.1104/pp.107.095455.
PMCID: PMC1914151
Chemical Genetic Identification of Glutamine Phosphoribosylpyrophosphate Amidotransferase as the Target for a Novel Bleaching Herbicide in Arabidopsis
Terence A. Walsh, Teresa Bauer, Roben Neal, Ann Owens Merlo, Paul R. Schmitzer, Glenn R. Hicks, Mary Honma, Wendy Matsumura, Karen Wolff, and John P. Davies
Plant Physiol. 2007 July; 144(3): 1292–1304. doi: 10.1104/pp.107.099705.
PMCID: PMC1914136
NAD-Dependent Isocitrate Dehydrogenase Mutants of Arabidopsis Suggest the Enzyme Is Not Limiting for Nitrogen Assimilation
Thomas Lemaitre, Ewa Urbanczyk-Wochniak, Valerie Flesch, Evelyne Bismuth, Alisdair R. Fernie, and Michael Hodges
Plant Physiol. 2007 July; 144(3): 1546–1558. doi: 10.1104/pp.107.100677.
PMCID: PMC1914144
Thioredoxin-Linked Proteins Are Reduced during Germination of Medicago truncatula Seeds
Fatima Alkhalfioui, Michelle Renard, William H. Vensel, Joshua Wong, Charlene K. Tanaka, William J. Hurkman, Bob B. Buchanan, and Françoise Montrichard
Plant Physiol. 2007 July; 144(3): 1559–1579. doi: 10.1104/pp.107.098103.
PMCID: PMC1914137
Bioenergetics and Photosynthesis
Ethylene Insensitivity Results in Down-Regulation of Rubisco Expression and Photosynthetic Capacity in Tobacco
Danny Tholen, Thijs L. Pons, Laurentius A.C.J. Voesenek, and Hendrik Poorter
Plant Physiol. 2007 July; 144(3): 1305–1315. doi: 10.1104/pp.107.099762.
PMCID: PMC1914117
The Flaveria bidentis β-Carbonic Anhydrase Gene Family Encodes Cytosolic and Chloroplastic Isoforms Demonstrating Distinct Organ-Specific Expression Patterns
Sasha G. Tetu, Sandra K. Tanz, Nicole Vella, James N. Burnell, and Martha Ludwig
Plant Physiol. 2007 July; 144(3): 1316–1327. doi: 10.1104/pp.107.098152.
PMCID: PMC1914143
Deletion of Glycine Decarboxylase in Arabidopsis Is Lethal under Nonphotorespiratory Conditions
Nadja Engel, Kirsten van den Daele, Üner Kolukisaoglu, Katja Morgenthal, Wolfram Weckwerth, Tiit Pärnik, Olav Keerberg, and Hermann Bauwe
Plant Physiol. 2007 July; 144(3): 1328–1335. doi: 10.1104/pp.107.099317.
PMCID: PMC1914133
Effects of the Lack of Phosphatidylglycerol on the Donor Side of Photosystem II
Isamu Sakurai, Naoki Mizusawa, Shunsuke Ohashi, Masami Kobayashi, and Hajime Wada
Plant Physiol. 2007 July; 144(3): 1336–1346. doi: 10.1104/pp.107.098731.
PMCID: PMC1914113
Identification of the Photorespiratory 2-Phosphoglycolate Phosphatase, PGLP1, in Arabidopsis
Sandra Schwarte and Hermann Bauwe
Plant Physiol. 2007 July; 144(3): 1580–1586. doi: 10.1104/pp.107.099192.
PMCID: PMC1914141
Cell Biology and Signal Transduction
Phosphatidylinositol 4-Kinase Activation Is an Early Response to Salicylic Acid in Arabidopsis Suspension Cells
Ondřej Krinke, Eric Ruelland, Olga Valentová, Chantal Vergnolle, Jean-Pierre Renou, Ludivine Taconnat, Matyáš Flemr, Lenka Burketová, and Alain Zachowski
Plant Physiol. 2007 July; 144(3): 1347–1359. doi: 10.1104/pp.107.100842.
PMCID: PMC1914138
Light-Dependent Regulation of Cell Division in Ostreococcus: Evidence for a Major Transcriptional Input
Mickael Moulager, Annabelle Monnier, Béline Jesson, Régis Bouvet, Jean Mosser, Christian Schwartz, Lionel Garnier, Florence Corellou, and François-Yves Bouget
Plant Physiol. 2007 July; 144(3): 1360–1369. doi: 10.1104/pp.107.096149.
PMCID: PMC1914124
Development and Hormone Action
HAWAIIAN SKIRT: An F-Box Gene That Regulates Organ Fusion and Growth in Arabidopsis
Zinnia H. González-Carranza, Unchalee Rompa, Janny L. Peters, Anuj M. Bhatt, Carol Wagstaff, Anthony D. Stead, and Jeremy A. Roberts
Plant Physiol. 2007 July; 144(3): 1370–1382. doi: 10.1104/pp.106.092288.
PMCID: PMC1914148
The Nuclear Pore Protein AtTPR Is Required for RNA Homeostasis, Flowering Time, and Auxin Signaling
Yannick Jacob, Chareerat Mongkolsiriwatana, Kira M. Veley, Sang Yeol Kim, and Scott D. Michaels
Plant Physiol. 2007 July; 144(3): 1383–1390. doi: 10.1104/pp.107.100735.
PMCID: PMC1914142
Expression of Genomic AtCYCD2;1 in Arabidopsis Induces Cell Division at Smaller Cell Sizes: Implications for the Control of Plant Growth
Ruhu Qi and Peter Crook Lloyd John
Plant Physiol. 2007 July; 144(3): 1587–1597. doi: 10.1104/pp.107.096834.
PMCID: PMC1914123
Environmental Stress and Adaptation to Stress
Genome-Wide Gene Expression Analysis Reveals a Critical Role for CRYPTOCHROME1 in the Response of Arabidopsis to High Irradiance
Tatjana Kleine, Peter Kindgren, Catherine Benedict, Luke Hendrickson, and Åsa Strand
Plant Physiol. 2007 July; 144(3): 1391–1406. doi: 10.1104/pp.107.098293.
PMCID: PMC1914119
Effects of Iron Deficiency on Iron Binding and Internalization into Acidic Vacuoles in Dunaliella salina
Yakov Paz, Eyal Shimoni, Meira Weiss, and Uri Pick
Plant Physiol. 2007 July; 144(3): 1407–1415. doi: 10.1104/pp.107.100644.
PMCID: PMC1914149
Characterization of Stress-Responsive CIPK Genes in Rice for Stress Tolerance Improvement
Yong Xiang, Yuemin Huang, and Lizhong Xiong
Plant Physiol. 2007 July; 144(3): 1416–1428. doi: 10.1104/pp.107.101295.
PMCID: PMC1914128
A Reassessment of the Function of the So-Called Compatible Solutes in the Halophytic Plumbaginaceae Limonium latifolium
David Gagneul, Abdelkader Aïnouche, Claire Duhazé, Raphaël Lugan, François Robert Larher, and Alain Bouchereau
Plant Physiol. 2007 July; 144(3): 1598–1611. doi: 10.1104/pp.107.099820.
PMCID: PMC1914112
Increased Abundance of Proteins Involved in Phytosiderophore Production in Boron-Tolerant Barley
John Patterson, Kris Ford, Andrew Cassin, Siria Natera, and Antony Bacic
Plant Physiol. 2007 July; 144(3): 1612–1631. doi: 10.1104/pp.107.096388.
PMCID: PMC1914127
Genetics, Genomics, and Molecular Evolution
Identification of a Novel Chloroplast Protein AtNYE1 Regulating Chlorophyll Degradation during Leaf Senescence in Arabidopsis
Guodong Ren, Kun An, Yang Liao, Xiao Zhou, Yajun Cao, Huifang Zhao, Xiaochun Ge, and Benke Kuai
Plant Physiol. 2007 July; 144(3): 1429–1441. doi: 10.1104/pp.107.100172.
PMCID: PMC1914121
Evolution of Flavone Synthase I from Parsley Flavanone 3β-Hydroxylase by Site-Directed Mutagenesis
Yvonne Helen Gebhardt, Simone Witte, Holger Steuber, Ulrich Matern, and Stefan Martens
Plant Physiol. 2007 July; 144(3): 1442–1454. doi: 10.1104/pp.107.098392.
PMCID: PMC1914147
Comparative Cross-Species Alternative Splicing in Plants
Hadas Ner-Gaon, Noam Leviatan, Eitan Rubin, and Robert Fluhr
Plant Physiol. 2007 July; 144(3): 1632–1641. doi: 10.1104/pp.107.098640.
PMCID: PMC1914131
Patterns of Selection and Tissue-Specific Expression among Maize Domestication and Crop Improvement Loci
Kristina M. Hufford, Payan Canaran, Doreen H. Ware, Michael D. McMullen, and Brandon S. Gaut
Plant Physiol. 2007 July; 144(3): 1642–1653. doi: 10.1104/pp.107.098988.
PMCID: PMC1914116
Plants Interacting with Other Organisms
Transcriptome Analysis of Arbuscular Mycorrhizal Roots during Development of the Prepenetration Apparatus
Valeria Siciliano, Andrea Genre, Raffaella Balestrini, Gilda Cappellazzo, Pierre J.G.M. deWit, and Paola Bonfante
Plant Physiol. 2007 July; 144(3): 1455–1466. doi: 10.1104/pp.107.097980.
PMCID: PMC1914140
The COMATOSE ATP-Binding Cassette Transporter Is Required for Full Fertility in Arabidopsis
Steven Footitt, Daniela Dietrich, Aaron Fait, Alisdair R. Fernie, Michael J. Holdsworth, Alison Baker, and Frederica L. Theodoulou
Plant Physiol. 2007 July; 144(3): 1467–1480. doi: 10.1104/pp.107.099903.
PMCID: PMC1914130
Tomato Mitogen-Activated Protein Kinases LeMPK1, LeMPK2, and LeMPK3 Are Activated during the Cf-4/Avr4-Induced Hypersensitive Response and Have Distinct Phosphorylation Specificities
Iris J.E. Stulemeijer, Johannes W. Stratmann, and Matthieu H.A.J. Joosten
Plant Physiol. 2007 July; 144(3): 1481–1494. doi: 10.1104/pp.107.101063.
PMCID: PMC1914120
Medicago truncatula Root Nodule Proteome Analysis Reveals Differential Plant and Bacteroid Responses to Drought Stress
Estíbaliz Larrainzar, Stefanie Wienkoop, Wolfram Weckwerth, Rubén Ladrera, Cesar Arrese-Igor, and Esther M. González
Plant Physiol. 2007 July; 144(3): 1495–1507. doi: 10.1104/pp.107.101618.
PMCID: PMC1914115
A Single Binding Site Mediates Resistance- and Disease-Associated Activities of the Effector Protein NIP1 from the Barley Pathogen Rhynchosporium secalis
Klaas A.E. van't Slot, Angela Gierlich, and Wolfgang Knogge
Plant Physiol. 2007 July; 144(3): 1654–1666. doi: 10.1104/pp.106.094912.
PMCID: PMC1914146
Systems Biology, Molecular Biology, and Gene Regulation
Down-Regulation of a SILENT INFORMATION REGULATOR2-Related Histone Deacetylase Gene, OsSRT1, Induces DNA Fragmentation and Cell Death in Rice
Limin Huang, Qianwen Sun, Fujun Qin, Chen Li, Yu Zhao, and Dao-Xiu Zhou
Plant Physiol. 2007 July; 144(3): 1508–1519. doi: 10.1104/pp.107.099473.
PMCID: PMC1914135
RNA Interference Silencing of Chalcone Synthase, the First Step in the Flavonoid Biosynthesis Pathway, Leads to Parthenocarpic Tomato Fruits
Elio G.W.M. Schijlen, C.H. Ric de Vos, Stefan Martens, Harry H. Jonker, Faye M. Rosin, Jos W. Molthoff, Yury M. Tikunov, Gerco C. Angenent, Arjen J. van Tunen, and Arnaud G. Bovy
Plant Physiol. 2007 July; 144(3): 1520–1530. doi: 10.1104/pp.107.100305.
PMCID: PMC1914118
Functional Characterization of the Arabidopsis Eukaryotic Translation Initiation Factor 5A-2 That Plays a Crucial Role in Plant Growth and Development by Regulating Cell Division, Cell Growth, and Cell Death
Haizhong Feng, Qingguo Chen, Jian Feng, Jian Zhang, Xiaohui Yang, and Jianru Zuo
Plant Physiol. 2007 July; 144(3): 1531–1545. doi: 10.1104/pp.107.098079.
PMCID: PMC1914145
Identification of a Bipartite Jasmonate-Responsive Promoter Element in the Catharanthus roseus ORCA3 Transcription Factor Gene That Interacts Specifically with AT-Hook DNA-Binding Proteins
Débora Vom Endt, Marina Soares e Silva, Jan W. Kijne, Giancarlo Pasquali, and Johan Memelink
Plant Physiol. 2007 July; 144(3): 1680–1689. doi: 10.1104/pp.107.096115.
PMCID: PMC1914126
Whole Plant and Ecophysiology
The Developmental Pattern of Tomato Fruit Wax Accumulation and Its Impact on Cuticular Transpiration Barrier Properties: Effects of a Deficiency in a β-Ketoacyl-Coenzyme A Synthase (LeCER6)
Jana Leide, Ulrich Hildebrandt, Kerstin Reussing, Markus Riederer, and Gerd Vogg
Plant Physiol. 2007 July; 144(3): 1667–1679. doi: 10.1104/pp.107.099481.
PMCID: PMC1914139
Correction
CORRECTIONS
Plant Physiol. 2007 July; 144(3): 1690. doi: 10.1104/pp.104.900229.
PMCID: PMC1914150
Corrects: M. Eric Schranz, et al. Comparative Genetic Mapping in Boechera stricta, a Close Relative of Arabidopsis. Plant Physiol. 2007 May; 144(1): 286–298.
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