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Volume 10(7);  July 2004
Bioinformatics
Computational comparative analyses of alternative splicing regulation using full-length cDNA of various eukaryotes
HITOMI ITOH, TAKANORI WASHIO, and MASARU TOMITA
RNA. 2004 July; 10(7): 1005–1018. doi: 10.1261/rna.5221604.
PMCID: PMC1370592
Reports
Targeted mutagenesis of the murine IRP1 and IRP2 genes reveals context-dependent RNA processing differences in vivo
BRUNO GALY, DUNJA FERRING, MONIKA BENESOVA, VLADIMIR BENES, and MATTHIAS W. HENTZE
RNA. 2004 July; 10(7): 1019–1025. doi: 10.1261/rna.7220704.
PMCID: PMC1370593
Crystal structure of the highly divergent pseudouridine synthase TruD reveals a circular permutation of a conserved fold
CHARMAINE HOANG and ADRIAN R. FERRÉ-D’AMARÉ
RNA. 2004 July; 10(7): 1026–1033. doi: 10.1261/rna.7240504.
PMCID: PMC1370594
Articles
Pseudouridine-guide RNAs and other Cbf5p-associated RNAs in Euglena gracilis
ANTHONY G. RUSSELL, MURRAY N. SCHNARE, and MICHAEL W. GRAY
RNA. 2004 July; 10(7): 1034–1046. doi: 10.1261/rna.7300804.
PMCID: PMC1370595
Identification and analysis of the minimal promoter activity of a novel noncoding nuclear RNA gene, AncR-1, from the honeybee (Apis mellifera L.)
MIYUKI SAWATA, HIDEAKI TAKEUCHI, and TAKEO KUBO
RNA. 2004 July; 10(7): 1047–1058. doi: 10.1261/rna.5231504.
PMCID: PMC1370596
Cross-linking experiments reveal the presence of novel structural features between a hepatitis delta virus ribozyme and its substrate
JONATHAN OUELLET and JEAN-PIERRE PERREAULT
RNA. 2004 July; 10(7): 1059–1072. doi: 10.1261/rna.7230604.
PMCID: PMC1370597
Npa1p is an essential trans-acting factor required for an early step in the assembly of 60S ribosomal subunits in Saccharomyces cerevisiae
IVÁN V. ROSADO and JESÚS DE LA CRUZ
RNA. 2004 July; 10(7): 1073–1083. doi: 10.1261/rna.7340404.
PMCID: PMC1370598
Long-term evolution of the S788 fungal nuclear small subunit rRNA group I introns
PEIK HAUGEN, HENRY JOSEPH RUNGE, and DEBASHISH BHATTACHARYA
RNA. 2004 July; 10(7): 1084–1096. doi: 10.1261/rna.5202704.
PMCID: PMC1370599
A horizontally acquired group II intron in the chloroplast psbA gene of a psychrophilic Chlamydomonas: In vitro self-splicing and genetic evidence for maturase activity
OBED W. ODOM, DAVID L. SHENKENBERG, JOSHUA A. GARCIA, and DAVID L. HERRIN
RNA. 2004 July; 10(7): 1097–1107. doi: 10.1261/rna.7140604.
PMCID: PMC1370600
The Euplotes telomerase subunit p43 stimulates enzymatic activity and processivity in vitro
STEFAN AIGNER and THOMAS R. CECH
RNA. 2004 July; 10(7): 1108–1118. doi: 10.1261/rna.7400704.
PMCID: PMC1370601
A novel function for Sam68: Enhancement of HIV-1 RNA 3′ end processing
MEREDITH MCLAREN, KENGO ASAI, and ALAN COCHRANE
RNA. 2004 July; 10(7): 1119–1129. doi: 10.1261/rna.5263904.
PMCID: PMC1370602
Interference probing of rRNA with snoRNPs: A novel approach for functional mapping of RNA in vivo
BEN LIU and MAURILLE J. FOURNIER
RNA. 2004 July; 10(7): 1130–1141. doi: 10.1261/rna.7190104.
PMCID: PMC1370603
A regulatory role for Sec tRNA[Ser]Sec in selenoprotein synthesis
RUTH R. JAMESON and ALAN M. DIAMOND
RNA. 2004 July; 10(7): 1142–1152. doi: 10.1261/rna.7370104.
PMCID: PMC1370604
Method
Quantitation of microRNAs using a modified Invader assay
HATIM T. ALLAWI, JAMES E. DAHLBERG, SARAH OLSON, ELSEBET LUND, MARILYN OLSON, WU-PO MA, TSETSKA TAKOVA, BRUCE P. NERI, and VICTOR I. LYAMICHEV
RNA. 2004 July; 10(7): 1153–1161. doi: 10.1261/rna.5250604.
PMCID: PMC1370605
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