|
In press
|
2008
|
2007
|
2006
|
2005
|
2004
|
2003
|
2002
|
2001
|
2000
1999
|
1998
|
1997
|
1996
|
1995
|
1994
|
1993
|
1992
|
1990
|
1988
Click the links to go to documents. Click the green arrow  to see metadata.
In press
Beechie, T. J., G. R. Pess, M. M. Pollock, M. H. Ruckelshaus, P. Roni. In press. Restoring rivers in the 21st century: science challenges in a management context. In Fish and Fisheries Series. Springer.
Fullerton, A. H., D. Jensen, E. A. Steel, D. Miller, P. McElhany. In press. How Certain Are Salmon Recovery Forecasts? A Watershed-Scale Sensitivity Analysis. Environmental Modeling and Assessment.
Fullerton, A. H., A. Steel, Y. Caras, M. B. Sheer, P. Olson, J. Kaje. In press. Putting watershed restoration in context: alternative future scenarios influence management outcomes. Ecological Applications.
Johnson, O. W., M. H. Ruckelshaus, W. S. Grant, F. W. Waknitz, A. M. Garrett, G. J. Bryant, K. Neely, J. J. Hard. In press. Coastwide Status Review of Coastal Cutthroat Trout (Oncorhynchus clarki clarki) by the National Marine Fisheries Service for listing under the Endangered Species Act. North American Journal of Fisheries Management.
McElhany, P., K. A. Avery, N. J. Yoder, C. Busack, B. Thompson. In press. Dealing with Uncertainty in Ecosystem Models: Lessons from a Complex Salmon Model. Ecological Applications.
Naiman, R. J., J. M. Helfield, K. K. Bartz, D. C. Drake, J. M. Honea. In press. Pacific Salmon, Marine-Derived Nutrients and the Characteristics of Aquatic and Riparian Ecosystems. In Cunjak, R. A. American Fisheries Society.
Top of Page
2008
Angilletta Jr., M. J., E. A. Steel, K. K. Bartz, J. G. Kingsolver, M. D. Scheuerell, B. R. Beckman, L. G. Crozier. 2008. Big dams and salmon evolution: changes in thermal regimes and their potential evolutionary consequences. Evolutionary Applications, 1(2):286299.
Good, T. P., J. R. Davies, B. J. Burke, M. H. Ruckelshaus. 2008. Incorporating catastrophic risk assessments into setting conservation goals for Pacific salmon. Ecological Applications 18(1): 246-257.
McClure, M. M., F. Utter, C. Baldwin, R. W. Carmichael, P. Hassemer, P. Howell, P. Spruell, T. Cooney, H. Schaller, C. Petrosky. 2008. Evolutionary Effects of Alternative Artificial Propagation Programs: Implications for the Viability of Endgered Anadromous Salmonids. Evolutionary Applications.
McClure, M. M., S. M. Carlson, T. J. Beechie, G. R. Pess, J. C. Jorgensen, S. M. Sogard, S. E. Sultan, D. M. Holzer, J. Travis, B. L. Sanderson, M. E. Power, R. W. Carmichael. 2008. Evolutionary consequences of habitat loss for Pacific anadromous salmonids. Evolutionary Applications.
Pess, G. R., M. L. McHenry, T. J. Beechie, and J. Davies. 2008. Biological impacts of the Elwha River dams and potential salmonid responses to dam removal. Northwest Science 82 (Special Issue):72-90.
Ruckelshaus, M. H., T. Klinger, N. Knowlton, D. Demaster, E. Sala. 2008. Marine Ecosystem-Based Management in Practice: Scientific and Governance Challenges. Bioscience, 58:53-63.
Wainwright, T. C., M. W. Chilcote, P. W. Lawson, T. E. Nickelson, C. W. Huntington, J. S. Mills, K. M. Moores, G. H. Reeves, H. A. Stout, L. A. Weitkamp. 2008. Biological recovery criteria for the Oregon Coast coho salmon evolutionarily significant unit. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-91, 199 p.
Top of Page
2007
Battin, J., M. W. Wiley, M. H. Ruckelshaus, R. N. Palmer, E. Korb, K. K. Bartz, H. Imaki. 2007. Projected impacts of future climate change on salmon habitat restoration actions in a Puget Sound river. Proceedings of the National Academy of Sciences, 104:6720-6725.
Davies, Jeremy R., Kerry M. Lagueux, Beth Sanderson, and Timothy J. Beechie, 2007. Modeling Stream Channel Characteristics From Drainage-Enforced DEMs in Puget Sound, Washington, USA. Journal of the American Water Resources Association (JAWRA) 43(2):414-426.
Good, T. P., M. M. McClure, B. P. Sandford, K. Barnas, D. M. Marsh, B. Ryan, E. Casillas. 2007. Quantifying the effect of Caspian tern predation on endangered and threatened Pacific salmonids in the Columbia River. Endangered Species Research, 3:11-21.
Good, T. P., T. J. Beechie, P. McElhany, M. M. McClure, M. H. Ruckelshaus. 2007. Recovery planning for Endangered Species Act-listed Pacific salmon: Using science to inform goals and strategies. Fisheries, 32:426-440.
Hall, J.E., D.M. Holzer, and T.J. Beechie. 2007. Predicting river floodplain and lateral channel migration for salmon habitat conservation. Journal of the American Water Resources Association. 43(3):786-797.
Hoekstra, J. M., K. K. Bartz, M. H. Ruckelshaus, J. M. Moslemi, T. K. Harms. 2007. Quantitative threat analysis for management of an imperiled species-Chinook salmon (Oncorhynchus tshawytscha). Ecological Applications, 17:2061-2073.
Lawson, P. W., E. P. Bjorkstedt, M. W. Chilcote, C. W. Huntington, J. S. Mills, K. M. Moores, T. E. Nickelson, G. H. Reeves, H. A. Stout, T. C. Wainwright, L. A. Weitkamp. 2007. Identification of historical populations of coho salmon (Oncorhynchus kisutch) in the Oregon coast evolutionarily significant unit. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-79, 129 p.
McClure, M. M., M. H. Ruckelshaus. 2007. Collaborative science: moving ecosystem-based management forward in Puget Sound. Fisheries.
Top of Page
2006
Bartz, K. K., K. M. Lagueux, M. D. Scheuerell, T. J. Beechie, A. D. Haas, M. H. Ruckelshaus. 2006. Translating restoration scenarios into habitat conditions: an initial step in evaluating recovery strategies for Chinook salmon (Oncorhynchus tshawytscha). Canadian Journal of Fisheries and Aquatic Sciences, 63:1578-1595.
Beechie, T. J., M. Liermann, M. M. Pollock, S. Baker, J. R. Davies. 2006. Channel pattern and river-floodplain dynamics in forested mountain river systems. Geomorphology, 78(1-2):124-141.
Beechie, T.J., M. Ruckelshaus, E. Buhle, A. Fullerton, L. Holsinger. 2006. Hydrologic regime and the conservation of salmon life history diversity. Biological Conservation 130(4):560-572.
Ellis, J., T. P. Good. 2006. Nest attributes, aggression, and breeding success of gulls in single and mixed species subcolonies. Condor, (108)211-219.
Good, T. P., D. Harstad, C. Hall, C. Maranto, M. Harper, B. Ryan. 2006. Predation on juvenile salmonids by Caspian Terns nesting in Potholes Reservoir. In Appendix in Piscivorous Waterbird Research on the Columbia River: draft 2005 season summary.
Kiffney, P. M., C. M. Greene, J. R. Davies, J. E. Hall. 2006. Tributary streams create spatial discontinuities in habitat, biological productivity, and diversity in mainstem rivers. Canadian Journal of Fisheries and Aquatic Sciences.
Ruckelshaus, M. H., K. P. Currens, W. H. Graeber, R. R. Fuerstenberg, K. Rawson, N. J. Sands, J. B. Scott. 2006. Independent populations of Chinook salmon in Puget Sound. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-78, 125 p.
Ruckelshaus, M. H., D. Darm. 2006. Science and Implementation. Pages 104-126 in Scott, J. M., D. D. Goble, F. W. Davis. (Eds.) The Endangered Species Act at 30: Conserving Biodiversity in Human-Dominated Landscapes. Island Press, Washington, D.C.
Scheuerell, M. D., R. Hilborn, M. H. Ruckelshaus, K. K. Bartz, K. M. Lagueux, A. D. Haas, K. Rawson. 2006. The Shiraz model: a tool for incorporating fish-habitat relationships in conservation planning. Canadian Journal of Fisheries and Aquatic Sciences, 63:1596-1607.
Sheer, M.B. and E.A. Steel. 2006. Lost watersheds: barriers, aquatic habitat connectivity and salmon persistence in the Willamette and Lower Columbia basins. Transactions of the American Fisheries Society 135(6):1654-1669.
Top of Page
2005
Good, T. P., K. Barnas, D. M. Marsh, M. M. McClure, B. Ryan, B. P. Sandford, E. Casillas. 2005. Caspian Tern Predation on Juvenile Salmonid Outmigrants in the Columbia River Estuary. In Caspian Tern Management to Reduce Predation of Juvenile Salmonids in the Columbia River Estuary. U.S. Fish and Wildlife Service Migratory Birds and Habitat Programs, Portland, OR..
Good, T. P., R. S. Waples, P. Adams. (eds.) 2005. Updated status of Federally listed ESUs of West Coast salmon and steelhead. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-66, 598 p.
Tear, T. H., P. Kareiva, P. L. Angermeier, P. Comer, B. Czech, R. Kautz, L. Landon, D. Mehlman, K. Murphy, M. H. Ruckelshaus, J. M. Scott, G. Wilhere. 2005. How much is enough? The recurrent problem of setting measurable objectives in conservation. Bioscience, 55:835-849.
Top of Page
2004
Good, T. P. 2004. Distribution and abundance patterns in Caribbean rocky intertidal zones. Bulletin of Marine Science, 74:459-468.
Keith, C., M. A. McCarthy, H. Regan, T. Regan, C. Bowles, C. Drill, C. Craig, B. Pellow, M. Burgman, L. Master, M. H. Ruckelshaus, B. Mackenzie, S. Andelman, P. R. Wade. 2004. Protocols for listing threatened species can forecast extinction. Ecology Letters, 7:1101-1108.
McCarthy, M. A., C. Keith, J. Tietjen, M. Burgman, M. Maunder, L. Master, B. W. Brook, G. Mace, H. P. Possingham, R. Medellin, S. Andelman, H. Regan, T. Regan, M. H. Ruckelshaus. 2004. Comparing predictions of extinction risk using models and subjective judgement. Acta Oecologica, 26:67-74.
Ruckelshaus, M. H., P. McElhany, M. M. McClure, S. Heppell. 2004. Chinook salmon in Puget Sound: Effects of spatially correlated catastrophes on persistence. Pages 208-218 in Ackakaya, R., M. Burgman, O. Kindvall, C. C. Wood, P. Sjogren-Gulve, J. S. Hatfield, M. A. McCarthy. (Eds.) Species Conservation and Management: Case Studies. Oxford Univ. Press.
Steel, E. A., B. E. Feist, D. Jenson, G. R. Pess, M. B. Sheer, J. Brauner, R. E. Bilby. 2004. Landscape models to understand steelhead (Oncorhynchus mykiss) distribution and help prioritize barrier removals in the Willamette Basin, OR, U.S.A. Canadian Journal of Fisheries and Aquatic Sciences, 61:999-1011.
Top of Page
2003
Good, T. P., T. K. Harms, M. H. Ruckelshaus. 2003.  Misuse of checklist assessments in endangered species recovery efforts. Conservation Ecology, 7(2):12, online .
Leslie, H., M. H. Ruckelshaus, I. R. Ball, S. Andelman, H. P. Possingham. 2003. Using siting algorithms in the design of marine reserve networks. Ecological Applications, 13(1 Suppl.):S185-S198.
Moore, S. E., J. M. Grebmeier, J. R. Davies. 2003. Gray whale distribution relative to forage habitat in the northern Bering Sea: current conditions and retrospective summary. Canadian Journal of Zoology, 81:734-742.
Payne, J. F., A. Mathieu, T. K. Collier. 2003. Ecotoxicological studies focusing on marine and freshwater fish. Pages 191-224 in Douben, P. E. (Ed.) PAHs: An Ecotoxicological Perspective. John Wiley.
Roberts, C. M., G. Branch, R. H. Bustamante, J. C. Castilla, J. Dugan, B. S. Halpern, K. D. Lafferty, H. Leslie, J. Lubchenco, D. McArdle, M. H. Ruckelshaus, R. R. Warner. 2003. Application of ecological criteria in selecting marine reserves and developing reserve networks. Ecological Applications, 13:S215-228.
Roberts, C. M., S. Andelman, G. Branch, R. H. Bustamante, J. C. Castilla, J. Dugan, B. S. Halpern, K. D. Lafferty, H. Leslie, J. Lubchenco, D. McArdle, H. P. Possingham, M. H. Ruckelshaus, R. R. Warner. 2003. Ecological criteria for evaluating candidate sites for marine reserves. Ecological Applications (Suppl.), 13(1 ):S199-S214.
Ruckelshaus, M. H., P. McElhany, M. J. Ford. 2003. Recovering species of conservation concern: Are populations expendable? Pages 305-329 in Kareiva, P., S. A. Levin. (Eds.) The importance of species : perspectives on expendability and triage. Princeton University Press.
Sanderson, B. L., E. A. Steel, T. J. Beechie, G. R. Pess, M. B. Sheer, C. A. Campbell. 2003. Analyses for Phase I recovery planning: setting recovery goals. Pages 18-39 in Beechie, T. J., E. A. Steel, P. Roni, E. Quimby. (Eds.) Ecosystem recovery planning for listed salmon: an integrated assessment approach for salmon habitat. U.S. Dept. Commerce, NOAA Technical Memorandum, NMFS-NWFSC-58, 183 p.
Steel, E. A., M. Liermann, P. McElhany, N. L. Scholz, A. Cullen. 2003. Managing uncertainty in habitat recovery planning. In Beechie, T. J., P. Roni, E. A. Steel, E. Quimby. (Eds.) Ecosystem recovery planning for listed salmon: An integrated assessment approach for salmon habitat. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-58, 183 p.
Zabel, R. W., C. J. Harvey, S. L. Katz, T. P. Good, P. S. Levin. 2003. Ecologically Sustainable Yield. American Scientist, 91:150-157.
Top of Page
2002
Good, T. P. 2002. Breeding success in the Western Gull x Glaucous-winged Gull complex: The influence of habitat and nest site characteristics. Condor, 104:353-365.
Good, T. P., J. Fabbri. 2002. Catastrophic risk assessment of Lower Columbia and Willamette River ESUs of threatened Pacific salmon. In Appendix L in Willamette/Lower Columbia Pacific salmonid viability criteria. Willamette/Lower Columbia Technical Recovery Team Report (P. McElhany et al.), December 2, 2002.
Levin, P. S., J. A. Coyer, R. Petrik, T. P. Good. 2002. Community-wide effects of non-indigenous species on temperate reefs. Ecology, 83:3182-3193.
Moore, S. E., W. A. Watkins, M. A. Daher, J. R. Davies, M. E. Dahlheim. 2002. Blue Whale Habitat Associations in the Northwest Pacific: analysis of remotely-sensed data using a Geographic Information System. Oceanography, 15(3):20-25.
Ruckelshaus, M. H., K. Currens, R. Fuerstenberg, W. Graeber, K. Rawson, N. J. Sands, K. J. Scott. 2002. Planning ranges and preliminary guidelines for the delisting and recovery of the Puget Sound Chinook salmon Evolutionarily Significant Unit. Puget Sound Technical Recovery Team.
Ruckelshaus, M. H., P. S. Levin, J. B. Johnson, P. Kareiva. 2002. The Pacific salmon wars: what science brings to the challenge of recovering species. Annual Review of Ecology and Systematics, 33:665-706.
Top of Page
2001
Johnson, O. W., A. M. Garrett, W. S. Grant, K. Neely, M. H. Ruckelshaus, F. W. Waknitz, J. J. Hard. 2001. Summary of status review of coastal cutthroat trout from the Pacific northwest. Pages 255-257 in Brewin, M. K., A. J. Paul, M. Monita. (Eds.) Bull trout II conference proceedings. Trout Unlimited Canada, Calgary, Alberta.
McClure, M. M., T. Cooney, M. Marvier. 2001. Assessing the role of dams in salmon recovery. Hydro-Review, 20:36?45.
Ruckelshaus, M. H., e. al. 2001. Independent populations of chinook salmon in Puget Sound. Puget Sound Technical Recovery Team Report, 92 p.
Stout, H. A., B. B. McCain, R. D. Vetter, T. L. Builder, W. H. Lenarz, L. L. Johnson, R. D. Methot. 2001. Status Review of Copper Rockfish (Sebastes caurinus), Quillback Rockfish (S. maliger), and Brown Rockfish (S. auriculatus) in Puget Sound, Washington. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-46, xxiv, 158 p.
Stout, H. A., R. G. Gustafson, W. H. Lenarz, B. B. McCain, D. M. Van Doornik, T. L. Builder, R. D. Methot. 2001. Status review of Pacific herring in Puget Sound, Washington. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-45, 175 p.
Top of Page
2000
McElhany, P., M. H. Ruckelshaus, M. J. Ford, T. C. Wainwright, E. P. Bjorkstedt. 2000. Viable salmon populations and the recovery of evolutionarily significant units. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-42, 156 p.
Top of Page
1999
Bergstrom, C. T., P. McElhany, L. Real. 1999. Transmission bottlenecks as determinants of virulence in rapidly evolving pathogens. Proceedings of the National Academy of Sciences, USA, 96:5095-5100.
Johnson, O. W., M. H. Ruckelshaus, W. S. Grant, F. W. Waknitz, A. M. Garrett, G. J. Bryant, K. Neely, J. J. Hard. 1999. Status review of coastal cutthroat trout from Washington, Oregon, and California. U.S. Dept. of Commerce, NOAA Tech. Memo., NMFS-NWFSC-37, 292 p. (PDF | HTML)
Kareiva, P., S. Andelman, D. Doak, B. Elderd, M. Groom, J. M. Hoekstra, L. Hood, F. James, J. Lamoreux, G. LeBuhn, C. McCulloch, J. Regetz, L. Savage, M. H. Ruckelshaus, D. Skelly, H. Wilbur, K. Zamudio, E. Aas. 1999. Using science in habitat conservation plans. American Institute of Biological Sciences, Washington, D.C., vi, 97 p.
Ruckelshaus, M. H., C. Hartway, P. Kareiva. 1999. Dispersal and landscape errors in spatially explicit population models: a reply. Conservation Biology, 13:1223-1224.
Top of Page
1998
Ruckelshaus, M. H., C. Hays, P. Fiedler, P. Kareiva. 1998. Conservation of species in the sea. Pages 112-156 in Conservation Biology for the Coming Decade. Chapman and Hall, New York.
Ruckelshaus, M. H. 1998. Spatial scale of genetic structure and an indirect estimate of gene flow in eelgrass, Zostera marina. Evolution, 52:330-343.
Top of Page
1997
Carlton, J. C., M. H. Ruckelshaus. 1997. Non-indigenous marine and estuarine invertebrates and plants of Florida. Pages 187-204 in Simberloff, D., T. Brown, D. Schmitz. (Eds.) Non-Indigenous Species in Florida: Patterns, Effects and Management. Island Press, Washington, D. C..
Kareiva, P., D. Skelly, M. H. Ruckelshaus. 1997. Re-evaluating the use of models to predict the consequences of habitat loss and fragmentation. Pages 156-166 in Pickett, S. T., R. Ostfeld, M. Shachak, G. Likens. (Eds.) The Ecological Basis of Conservation: Heterogeneity, Ecosystems and Biodiversity. Chapman and Hall, NY.
Ruckelshaus, M. H., C. Hartway, P. Kareiva. 1997. Assessing the data requirements of spatially explicit dispersal models. Conservation Biology, 11:1298-1306.
Top of Page
1996
Ruckelshaus, M. H. 1996. Estimates of genetic neighborhood parameters from pollen and seed dispersal distributions in a marine angiosperm (Zostera marina L. ). Evolution, 50:856-864.
Top of Page
1995
Ruckelshaus, M. H. 1995. Estimates of the mating system and of inbreeding depression in a population of the marine angiosperm Zostera marina L. Marine Biology, 123:583-593.
Wennergren, U., M. H. Ruckelshaus, P. Kareiva. 1995. The promise and limitations of spatial models in conservation biology. Oikos, 74:349-356.
Top of Page
1994
Ruckelshaus, M. H. 1994. Ecological and genetic factors affecting population structure in the marine angiosperm, Zostera marina L. Ph. D University of Washington, Seattle, WA, v, 207 p.
Ruckelshaus, M. H. 1994. The importance of ecological and genetic attributes of marine plant populations to restoration of nearshore habitats. In Wyllie-Echeverria, T., A. M. Olson, M. J. Hershman. (Eds.) Seagrass Science and Policy in the Pacific Northwest. EPA 910/R-94-004.
Schemske, D. W., B. C. Husband, M. H. Ruckelshaus, C. Goodwillie, I. M. Parker, J. G. Bishop. 1994. Establishing priorities in plant conservation. Ecology, 75:584-606.
Top of Page
1993
Ruckelshaus, M. H., R. C. Wissmar, C. A. Simenstad. 1993. The importance of autotroph distribution to mussel growth in a well-mixed, temperate estuary. Estuaries, 16:898-912.
Williams, S. L., M. H. Ruckelshaus. 1993. Effects of nitrogen availability and herbivory on the interaction between eelgrass (Zostera marina L. ) and epiphytes. Ecology, 74:904-918.
Top of Page
1992
Cox, P. A., R. H. Laushman, M. H. Ruckelshaus. 1992. Surface and submarine pollination in the seagrass Zostera marina L. Botanical Journal of the Linnean Society, 109:281-291.
Top of Page
1990
Ruckelshaus, M. H., R. C. Wissmar, C. A. Simenstad. 1990. Sources and Fates of organic matter: utilization of eelgrass carbon by estuarine bivalves. Pages 13-20 in Merkel, K. W., R. S. Hoffman. (Eds.) Proc. Calif. Eelgrass Symp. Sweetwater River Press, CA.
Top of Page
1988
Ruckelshaus, M. H., R. C. Wissmar, C. A. Simenstad. 1988. Mussel growth and estuarine habitat quality. Pages 463-472 in Proc. First Annual Meeting Puget Sound Research. Vol. I. Puget Sound Water Quality Authority, WA.
Top of Page
|
