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NCRR's Division of Comparative Medicine helps meet the needs of biomedical researchers for high-quality, disease-free animals and specialized animal research facilities.

NCRR's Division of Comparative Medicine helps meet the needs of biomedical researchers for high-quality, disease-free animals and specialized animal research facilities.

NCRR's Division of Comparative Medicine helps meet the needs of biomedical researchers for high-quality, disease-free animals and specialized animal research facilities.

NCRR's Division of Comparative Medicine helps meet the needs of biomedical researchers for high-quality, disease-free animals and specialized animal research facilities.

NCRR's Division of Comparative Medicine helps meet the needs of biomedical researchers for high-quality, disease-free animals and specialized animal research facilities.

Invertebrate Animal Resources

Bloomington Drosophila Stock Center

Research Emphasis/Objectives

The center collects, maintains, and distributes genetically defined strains of Drosophila melanogaster with significant research value. Emphasis is placed on genetic tools that are useful to a broad range of investigations. These include basic stocks of flies used in genetic analysis such as marker, balancer, mapping, and transposon-tagging strains; mutant alleles of identified genes, including a large set of transposable element insertion alleles; defined sets of deficiencies and a variety of other chromosomal aberrations; engineered lines for somatic and germline clonal analysis; GAL4 and UAS lines for targeted gene expression; enhancer trap and lacZ-reporter strains with defined expression patterns for marking tissues; and a collection of transposon-induced lethal mutations.

Services Provided

Approximately 23,000 fly strains are currently available. Up-to-date stock lists are available for searching, browsing, or downloading/copying at the Internet site. An order form is available on the same site. One small subculture is provided of each requested stock. Larger quantities of animals cannot be provided by the center. Requests may be submitted via a web-based automated ordering system. Stock center scientists are available to answer questions about center stocks, use of the database, or general questions about Drosophila genetics for researchers new to the field.

New users of the collections must contact the center for a Bloomington user number (BUN) before ordering stocks. Visit the Web siteexternal link, opens in new window for information on ordering stocks and for current fees.

Contact Information

Bloomington Drosophila Stock Center
Department of Biology
Indiana University
1001 East 3rd Street
Bloomington, IN 47405-3700

Web site: flystocks.bio.indiana.eduexternal link, opens in new window

NCRR cofunding of National Science Foundation grant DBI 9816125

Principal Investigator
Kevin R. Cook, Ph.D.
812-856-1213; Fax: 812-855-2577
E-mail: kercook@indiana.edu

Additional Contacts
Thomas C. Kaufman, Ph.D.
812-855-3033; Fax: 812-855-2577
E-mail: kaufman@indiana.edu

Kathleen A. Matthews, Ph.D
812-855-5782; Fax: 812-855-2577
E-mail: matthewk@indiana.edu

Drosophila Genomics Resource Center

Research Emphasis/Objectives

The Drosophila Genomics Resource Center (DGRC) collects and distributes reagents and materials essential for Drosophila genomics research, including large clone sets, common transformation vectors, cell lines, and DNA microarrays. It also tests emerging genomics technologies and provides users with guidance in the use of resources.

Services Provided

Clones: A collection of over 1,000,000 clones is distributed as individual clones and sets. For each clone in the collection, the DGRC web site provides relevant references, sequence information, restriction maps, and links to FlyBase entries.

Transformation Vectors: The Center distributes general-purpose transformation vectors for use in flies or in cultured cells.

Cell lines: The DGRC distributes Drosophila cell lines, provides Web site support for their use and handling, encourages further characterization of the lines that are less well known, and provides a general stimulus to Drosophila cell culture efforts. Researchers are currently conducting the necessary experiments to provide microarray gene expression profiles and karyotype information.

Microarray Resources: The Center distributes DNA microarray slides, including genome tiling path arrays, transcriptome arrays, with some specialty arrays available upon request.

Users must create an account prior to purchasing. In addition to purchase orders, online credit card orders are alo accepted. Fees are adjusted on an annual basis.

Contact Information

The Center for Genomics and Bioinformatics
Jordan Hall A311
Indiana University
1001 East 3rd Street
Bloomington, IN 47405-3700

Web site: http://dgrc.cgb.indiana.eduexternal link, opens in new window

Grant No. P40 RR0117093

Principal Investigator
Justen R. Andrews, Ph.D.
812-855-6621; Fax: 812-856-9340
E-mail: jandrew@bio.indiana.edu

Additional Contacts
Peter Cherbas, Ph.D.
812-855-6273; Fax: 812-856-9340
E-mail: cherbas@indiana.edu

Thom Kaufman, Ph.D.
812-855-3033: Fax: 812-855-6705
E-mail: kaufman@indiana.edu

Jennifer Steinbachs, Ph.D.
812-856-1858; Fax: 812-856-9340
E-mail: stein@cgb.indiana.edu

Caenorhabditis Genetics Center

Research Emphasis/Objectives

The Caenorhabditis Genetics Center (CGC) acquires, maintains, and distributes genetic stocks and information about stocks of the small free-living nematode Caenorhabditis elegans for use by investigators initiating or continuing research on this genetic model organism. The CGC acquires and maintains a C. elegans bibliography and publishes and distributes a C. elegans research newsletter, The Worm Breeder's Gazette (WBG), and a WBG subscriber directory. The CGC acts as a clearinghouse for genetic nomenclature and maintains the C. elegans genetic map; these latter functions are managed as a subcontract from the CGC by Dr. Jonathan Hodgkin at MRC Laboratory of Molecular Biology, Cambridge CB2 2QH, England. The C. elegans Web siteexternal link, opens in new window, which provides a single point of access to all C. elegans information available on the Internet, is supported by the CGC as a subcontract to the University of Texas Southwestern Medical Center and Dr. Leon Avery.

Services Provided

Animals

The CGC's collection of more than 4,000 strains includes one allele of each mapped gene, all available chromosome rearrangements, and selected multiple-mutant stocks for genetic mapping. The CGC also has stocks of nematode species closely related to C. elegans. Requests for strains should include a brief statement of the research or training activity for which the stocks are intended. Information about CGC stocks can be obtained from the CGC Web site.

The Worm Breeder's Gazette

The WBG is distributed worldwide to approximately 500 subscribers who pay a small subscription fee. Each volume consists of six issues distributed over two years. Except for the last issue of each volume, which is devoted to an updated genetic map, the WBG includes short abstracts of preliminary findings, work in progress, and other news about C. elegans. Access the electronic version of the WBGexternal link, opens in new window.

Nomenclature Information

Recommended guidelines and persons to contact for specific questions about C. elegans genetic nomenclature can be found at elegans.swmed.edu/Genome/Nomencl2001w.htmexternal link, opens in new window.

CGC Bibliography

A periodically updated C. elegans bibliography, including abstracts, is available on the CGC Web site or from elegans.swmed.eduexternal link, opens in new window.

Contact Information

Caenorhabditis Genetics Center
Department of Genetics and Cell Biology
University of Minnesota
250 BioScience Center
1445 Gortner Avenue
St. Paul, MN 55108-1095

Web site: www.cbs.umn.edu/CGCexternal link, opens in new window

Principal Investigator
Robert K. Herman, Ph.D.

Additional Contact
Theresa L. Stiernagle
612-625-2265; Fax: 612-625-5754
E-mail: stier@biosci.cbs.umn.edu

Center for C. elegans Anatomy

Research Emphasis/Objectives

The center does ultrastructural research on the anatomy and development of the model organism, Caenorhabditis elegans. Transmission and scanning electron microscopic (TEM and SEM)studies are conducted in collaboration with established C. elegans researchers and with new students and postdoctoral fellows. Tissue defects in selected mutant alleles are compared with normal nematode tissues.

Electron microscopic (EM) techniques are being developed and improved for C. elegans studies, including better fixations and embeddings for immunoEM and histochemical studies.

An archive of TEM images has been assembled for the normal animal—adults, larvae, embryos, and in both sexes. The data are being used to create an online database (WORMATLASexternal link, opens in new window) featuring a Handbook of Anatomy, a Glossary, and the Slideable Worm, where all tissues are displayed in relation to the whole body. Our online Community Forum answers queries regarding EM methods and specific details of nematode anatomy. An online searchable image database (WORMIMAGEexternal link, opens in new window) presents thousands of original micrographs from the TEM Archive. Our goal is to make the information free to all researchers and teachers interested in nematode anatomy and development.

Current Research

Several major themes are being followed. These include the ultrastructural anatomy of aging, axon guidance, cell death and autophagy, intercellular fusion, and gonadal development. Synaptic wiring in wild type and mutant animals is studied in serial thin sections; a principal effort is to complete the neuronal wiring of the adult male tail.

High-pressure freezing and microwave protocols are being compared as methods for immunocytochemistry and for mutant analysis.

Services Provided

Advanced training is available on a one-to-one basis to learn EM methods for C. elegans; that the student should have some background in electron microscopy in advance. Techniques include fixation, embedding, serial thin sections, antibody staining, and microscopy.

Our technical staff can help in conducting research projects using these methods. The work is often shared with the collaborating laboratory, so that an outside investigator learns to use the microscope, collect images, and analyze the data.

Select portions of the IMAGE Archive are available upon request by FTP or on DVDs.

Contact Information

Center for C. elegans Anatomy
1300 Morris Park Avenue
Kennedy Center, Room 601
Albert Einstein College of Medicine
Bronx, New York 10461

Web site: www.wormatlas.orgexternal link, opens in new window

Web site: www.wormimage.orgexternal link, opens in new window

Grant No.: R24 RR012596

Principal Investigator
David H. Hall, Ph.D.
718-430-2195; Fax: 718- 430-8821
E-mail: hall@aecom.yu.edu

Additional Contact
Zeynep Altun, M.D.,Ph.D.
718-430-2195; Fax: 718-430-8821
E-mail: zaltun@aecom.yu.edu

A Comprehensive Resource Base for C. elegans K+ Channels

Research Emphasis/Objectives

This is a resource base, which includes potassium channel cDNA clones in vectors suitable for functional expression and stocks of gene knockout strains. Supporting this resource base are studies showing the basic biophysical properties of the channels, studies showing the phenotypes of mutants, and information on the cell-type expression patterns of potassium channels.

Current Research

Studies of potassium channel cell-type expression patterns and functional properties; studies of behavioral phenotypes; generation of knockout mutants.

Services Provided

Full-length cDNAs encoding C. elegans potassium channels in a vector suitable for functional expression in Xenopus oocytes and mammalian cell lines are available on request.

Information is also provided describing the cell-type expression patterns and basic biophysical properties of potassium channels.

C. elegans strains carrying knockouts of potassium channels are also generated and deposited at the C. elegans stock center at the University of Minnesota.

Data on behavioral phenotypes are also available.

Contact Information

A Comprehensive Resource Base for C. elegans K+ Channels
Washington University Department of Anatomy and Neurobiology
Department of Genetics
Campus Box 8108
660 South Euclid Avenue
St. Louis, MO 63110

Web site: nt-salkoff.wustl.eduexternal link, opens in new window

Grant No.: R24 RR017342

Principal Investigator
Lawrence B. Salkoff, Ph.D.
314-362-3644; Fax: 314-362-3446
E-mail: SalkoffL@pcg.wustl.edu

Additional Contact
Alice Butler
314-362-3677; Fax: 314-362-3446
E-mail: butlera@pcg.wustl.edu

National Resource for Aplysia

Research Emphasis/Objectives

This resource provides research investigators with laboratory-reared Aplysia californica of known age and standardized environmental background, as well as their food source.

Current Research

Primary goal is to optimize and standardize Aplysia used by NIH investigators. This includes a health monitoring program based on water quality testing and animal bacteriological screening. Ancillary projects include genetics and functional genomic studies to characterize the variation of laboratory-reared animals in comparison with natural populations, and neurophysiological studies of the nervous system during development.

Services Provided

To Outside Investigators

Sibling animals of known ages and stages are available to investigators throughout the year. On request, Aplysia and their food (red seaweed) are shipped via Federal Express, overnight priority. Shipping and handling costs are charged to the investigator. Special cohorts, procedures, or manipulations of animal groups can be arranged by contacting the persons named above.

Animals

The colony currently contains more than 10,000 laboratory-reared animals at various life stages and known ages. All animals are produced from field-collected brood stock, monitored for health, and randomly tested for behavioral responses prior to shipping.

Core Staff

Includes investigators carrying out studies of life history, animal husbandry, disease prevention, genetic and functional genomic variability, and neurophysiology.

Guest Investigators and Graduate Students

Guest investigators and graduate students interested in studies of life history, culture, genetics, and neurophysiology are encouraged to inquire. Selection will be based on the relevance of the proposed study and the availability of resources to meet individual needs.

Contact Information

National Resource for Aplysia
Rosenstiel School of Marine and Atmospheric Science
University of Miami
4600 Rickenbacker Causeway
Miami, FL 33149

Web site: www.rsmas.miami.edu/groups/sea-haresexternal link, opens in new window

Grant No.: P40 RR010294

Principal Investigator
Michael C. Schmale, Ph.D.
E-mail: mschmale@miami.edu

Additional Contact
Thomas R. Capo
305-421-4946; Fax: 305-421-4934
E-mail: tcapo@rsmas.miami.edu

National Resource Center for Cephalopods

Research Emphasis/Objectives

The center serves the biomedical research community's increased needs for alternative invertebrate models by maintaining a consistent year-round supply of live cephalopod mollusks. These animals are suitable for a wide range of physiological and molecular biological investigations.

Current Research

Investigations are being conducted in the area of life history related to improved animal husbandry. Further studies focus on improving culture system design through development of computer automation and innovative water filtration technology. Current biomedical research on cephalopods includes neurophysiology of the giant axon; anatomy and neurophysiology of the equilibrium receptor organ as a comparative model of the vestibular system of invertebrates; chemoreception, basic nutrition, and protein metabolism; cellular receptor function; and brain, behavior, and learning.

Services Provided

The center has built a computer-automated, environmentally controlled, recirculating seawater laboratory for the purpose of culturing cephalopods. The tank systems can be used to conduct a variety of experiments never before possible with cephalopods.

To Outside Investigators

Visiting researchers have access to dedicated facilities, including wet and dry laboratory space, office space, computer support and accommodations, as well as priority access to all available live animal resources. Off-site investigators can have live animals, dissected animal tissues/body fluids from all life stages, and a variety of molecular reagents (gene libraries and clones) delivered year-round. Staff expertise and an extensive literature library are available.

Animals/Materials

All life stages of the squid (Sepioteuthis lessoniana) and the common cuttlefish (Sepia officinalis) are available year-round from laboratory culture populations. The sepiolid squid (Euprymna scolopes) can also be cultured on request. The squid Lolliguncula brevis is available year-round from local waters; the squids Loligo opalescens, L. pealeii, and L. plei can be obtained seasonally on request. The chambered nautilus, Nautilus pompilius, and Octopus bimaculoides are available on request. Animal costs vary by species and size. Any tissue or body fluid from these animals can also be provided. Fees for special services are negotiated on a case-by-case basis.

Contact Information

National Resource Center for Cephalopods
The Marine Biomedical Institute
University of Texas Medical Branch
Galveston, TX 77555-1163

Web site: www.nrcc.utmb.eduexternal link, opens in new window

Grant No.: P40 RR001024

Principal Investigator
Phillip G. Lee, Ph.D.

Additional Contacts
John W. Forsythe, M.S.
409-772-3662; Fax: 409-772-6993
E-mail: john.forsythe@utmb.edu

Leigh Walsh
409-747-0768
E-mail: lswalsh@utmb.edu

Resource Center for Tetrahymena Themophila

Research Emphasis/Objectives

This resource provides a centralized repository for genetically distinct strains of Tetrahymena thermophila, a ciliated protozoan that has served as a key model for studies of eukaryotic cellular and molecular biology for more than 50 years. The stock center will: 1) collect, annotate, and store experimentally useful cell lines; 2) establish a database that will provide essential information about these strains to the community at-large; and 3) supply actively growing cultures to researchers around the world.

Contact Information

Resource Center for Tetrahymena Themophila
Department of Microbiology and Immunology
College of Veterinary Medicine
Cornell University
Ithaca, NY 14853

Grant No.: P40 RR019688

Principal Investigator
Ted Clark
607-253-4042; Fax: 607-253-3384
E-mail: tgc3@cornell.edu

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