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PeptGen Peptide Generator

Purpose: Given an amino acid sequence, this tool generates and displays sets of overlapping peptides that can be used for peptide design and epitope mapping.

How to use: Paste amino acid sequence(s) in any valid format into the window below, or upload a file of sequences. Change the default values for the other parameters as needed and hit Submit. You can also use an HCV consensus sequence as input.

For additional details, see PeptGen Explanation.

Input

Paste your input here [SAMPLE INPUT]
or upload your file
If you are submitting an alignment check this box

Options

Make peptides of length	C-terminal forbidden amino acids
Overlap peptides by	N-terminal forbidden amino acids
Shorten by	Apply proline rule	Yes No
Lengthen by	Calculate hydropathy	Yes No
	Color amino acids	Yes No

Output

Produce simple output
Duplicate peptides	flag remove
Gaps	remove save
Output style	classic new

Questions or comments? Contact us at hcv-info@lanl.gov