Home
The database
DB Help
CTL search
T Helper search
Antibody search
Alignments
Tools
Epilign
PeptGen
Motif Scan
Sequence Locator 
External tools
ELF
Other databases
Sequence DB
HIV Databases


link goes to
sequence website


Disclaimer

The funding for the HCV database project has stopped, and this website and the HCV immunology database are no longer maintained. The site will stay up, but problems will not be fixed. The database was last updated in September 2007. The HIV immunology website contains the same tools, and may be usable for non-HCV-specific analyses. For new epitope information, users of this database can try the Immuno Epitope Database (http://www.immuneepitope.org). More information is here.

HLA Binding Motif Scanner

Use this page to find HLA anchor residue motifs within protein sequences for specified HLA genotype, serotypes or supertypes. Refer to the Help page for more information.

Please enter your search criteria
HLAs
Genotype Serotype Supertype
Motif Source
Motif Length
Custom Motif

 


Find All Motifs in a Sequence

Enter a protein sequence below to scan it for all known motifs.

 


Data dictionaries

View or download the HLA genotype/serotype dictionary.

View or download the HLA genotype/motif dictionary.

View or download the HLA supertype dictionary.

 
hcv-info@lanl.gov