HCV Sequence Search Interface

Please read an important announcement about the future of the HCV database here.

PLEASE NOTE: due to technical problems the HCV database has not been updated since May 2008. We hope to be able to resume the updates by the end of 2008.

HCV search interface

Last database update: May 7 2008

Tips
- Click or mouse over the field name for help
- To list fields that are not listed by default or included in the search, put a '*' in their input box

Sequence Information

Accession number

Sequence name

Sequence length

Genotype		Subtype
Include recombinants Confirmed only

Reference Information

Author(s)

Pubmed / Medline ID

Patient Information

Patient Code

Infection Route

Patient Health

Treatment Response

Infection Country

Infection Year

Other Information

Sampling country

Sampling year

Geographic region

Find all sequences for a specific gene or region

Genomic region (view genomic map)
or choose start and end
Include fragments longer than

To retrieve HCV sequences from the database and integrate them into your own sequence alignment, paste your aligned nucleotide sequences here in fasta format:

Or upload your alignment file:

Exclude:

Non-human hosts

Patent sequences

Synthetic sequences

"Bad" sequences

List records per page

Show results selected

Questions or comments? Contact us at hcv-info@lanl.gov

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