| | Research Articles The Early ANTP Gene Repertoire: Insights from the Placozoan Genome Bernd Schierwater, Kai Kamm, Mansi Srivastava, Daniel Rokhsar, Rafael D. Rosengarten, and Stephen L. Dellaporta PMCID: PMC2515636 Estimating the Resources Needed and Savings Anticipated from Roll-Out of Adult Male Circumcision in Sub-Saharan Africa Bertran Auvert, Elliot Marseille, Eline L. Korenromp, James Lloyd-Smith, Remi Sitta, Dirk Taljaard, Carel Pretorius, Brian Williams, and James G. Kahn PMCID: PMC2475667 Cocaine Serves as a Peripheral Interoceptive Conditioned Stimulus for Central Glutamate and Dopamine Release Roy A. Wise, Bin Wang, and Zhi-Bing You PMCID: PMC2475658 Gene Expression and Functional Studies of the Optic Nerve Head Astrocyte Transcriptome from Normal African Americans and Caucasian Americans Donors Haixi Miao, Lin Chen, Sean M. Riordan, Wenjun Li, Santiago Juarez, Andrea M. Crabb, Thomas J. Lukas, Pan Du, Simon M. Lin, Alexandria Wise, Olga A. Agapova, Ping Yang, Charles C. Gu, and M. Rosario Hernandez PMCID: PMC2518525 Coincident Activity of Converging Pathways Enables Simultaneous Long-Term Potentiation and Long-Term Depression in Hippocampal CA1 Network In Vivo ZhiFang Dong, HuiLi Han, Jun Cao, Xia Zhang, and Lin Xu PMCID: PMC2475662 Messenger RNA Oxidation Occurs Early in Disease Pathogenesis and Promotes Motor Neuron Degeneration in ALS Yueming Chang, Qiongman Kong, Xiu Shan, Guilian Tian, Hristelina Ilieva, Don W. Cleveland, Jeffrey D. Rothstein, David R. Borchelt, Philip C. Wong, and Chien-liang Glenn Lin PMCID: PMC2481395 K-ras/PI3K-Akt Signaling Is Essential for Zebrafish Hematopoiesis and Angiogenesis Lihui Liu, Shizhen Zhu, Zhiyuan Gong, and Boon Chuan Low PMCID: PMC2483249 A Randomised Controlled Trial of Triple Antiplatelet Therapy (Aspirin, Clopidogrel and Dipyridamole) in the Secondary Prevention of Stroke: Safety, Tolerability and Feasibility Nikola Sprigg, Laura J. Gray, Tim England, Mark R. Willmot, Lian Zhao, Gillian M. Sare, and Philip M. W. Bath PMCID: PMC2481397 Three-Dimensional Analysis of Vascular Development in the Mouse Embryo Johnathon R. Walls, Leigh Coultas, Janet Rossant, and R. Mark Henkelman PMCID: PMC2478714 Response Properties of the Auditory Telencephalon in Songbirds Change with Recent Experience and Season Thomas A. Terleph, Kai Lu, and David S. Vicario PMCID: PMC2475665 A High-Sensitivity Method for Detection and Measurement of HMGB1 Protein Concentration by High-Affinity Binding to DNA Hemicatenanes Claire Gaillard, Chloé Borde, Joël Gozlan, Vincent Maréchal, and François Strauss PMCID: PMC2478715 Comparison of Pattern Detection Methods in Microarray Time Series of the Segmentation Clock Mary-Lee Dequéant, Sebastian Ahnert, Herbert Edelsbrunner, Thomas M. A. Fink, Earl F. Glynn, Gaye Hattem, Andrzej Kudlicki, Yuriy Mileyko, Jason Morton, Arcady R. Mushegian, Lior Pachter, Maga Rowicka, Anne Shiu, Bernd Sturmfels, and Olivier Pourquié PMCID: PMC2481401 Emergence of Xin Demarcates a Key Innovation in Heart Evolution Shaun E. Grosskurth, Debashish Bhattacharya, Qinchuan Wang, and Jim Jung-Ching Lin PMCID: PMC2478706 Improving T-Cell Assays for the Diagnosis of Latent TB Infection: Potential of a Diagnostic Test Based on IP-10 Morten Ruhwald, Janne Petersen, Kristian Kofoed, Hiroshi Nakaoka, Luis Eduardo Cuevas, Lovett Lawson, Stephen Bertil Squire, Jesper Eugen-Olsen, and Pernille Ravn PMCID: PMC2483344 Characterization of a Nonclassical Class I MHC Gene in a Reptile, the Galápagos Marine Iguana (Amblyrhynchus cristatus) Scott Glaberman, Louis Du Pasquier, and Adalgisa Caccone PMCID: PMC2483932 Ubiquitous Crossmodal Stochastic Resonance in Humans: Auditory Noise Facilitates Tactile, Visual and Proprioceptive Sensations Eduardo Lugo, Rafael Doti, and Jocelyn Faubert PMCID: PMC2481403 A Randomised Trial of an Eight-Week, Once Weekly Primaquine Regimen to Prevent Relapse of Plasmodium vivax in Northwest Frontier Province, Pakistan Toby Leslie, Ismail Mayan, Nasir Mohammed, Panna Erasmus, Jan Kolaczinski, Christopher J. M. Whitty, and Mark Rowland PMCID: PMC2481394 Perceiving What Is Reachable Depends on Motor Representations: Evidence from a Transcranial Magnetic Stimulation Study Yann Coello, Angela Bartolo, Bastien Amiri, Hervé Devanne, Elise Houdayer, and Philippe Derambure PMCID: PMC2483935 Induction of Olig2+ Precursors by FGF Involves BMP Signalling Blockade at the Smad Level Bilada Bilican, Christelle Fiore-Heriche, Alastair Compston, Nicholas D. Allen, and Siddharthan Chandran PMCID: PMC2483937 Riluzole Increases the Amount of Latent HSF1 for an Amplified Heat Shock Response and Cytoprotection Jingxian Yang, Kristen Bridges, Kuang Yu Chen, and Alice Y.-C. Liu PMCID: PMC2481402 Iron Accumulation with Age, Oxidative Stress and Functional Decline Jinze Xu, Mitchell D. Knutson, Christy S. Carter, and Christiaan Leeuwenburgh PMCID: PMC2481398 Mere Expectation to Move Causes Attenuation of Sensory Signals Martin Voss, James N. Ingram, Daniel M. Wolpert, and Patrick Haggard PMCID: PMC2478717 Rapid Assessment of Avoidable Blindness in India John Neena, Jose Rachel, Vashist Praveen, Gudlavalleti V. S. Murthy, and for the RAAB India Study Group PMCID: PMC2478719 Individual Attachment Style Modulates Human Amygdala and Striatum Activation during Social Appraisal Pascal Vrtička, Frédéric Andersson, Didier Grandjean, David Sander, and Patrik Vuilleumier PMCID: PMC2478709 Protective Immunity to Mycobacterium tuberculosis Infection by Chemokine and Cytokine Conditioned CFP-10 Differentiated Dendritic Cells Nasir Salam, Shashank Gupta, Sachin Sharma, Shweta Pahujani, Aprajita Sinha, Rajiv K. Saxena, and Krishnamurthy Natarajan PMCID: PMC2478708 Major Role for Amphotericin B–Flucytosine Combination in Severe Cryptococcosis Françoise Dromer, Claire Bernede-Bauduin, Didier Guillemot, Olivier Lortholary, and for the French Cryptococcosis Study Group PMCID: PMC2483933 Characterization of Unique Small RNA Populations from Rice Grain Sara E. Heisel, Yuanji Zhang, Edwards Allen, Liang Guo, Tracey L. Reynolds, Xiao Yang, David Kovalic, and James K. Roberts PMCID: PMC2518513 Non-Replication of Genome-Wide Based Associations between Common Variants in INSIG2 and PFKP and Obesity in Studies of 18,014 Danes Camilla H. Andreasen, Mette S. Mogensen, Knut Borch-Johnsen, Annelli Sandbæk, Torsten Lauritzen, Thorkild I. A. Sørensen, Lars Hansen, Katrine Almind, Torben Jørgensen, Oluf Pedersen, and Torben Hansen PMCID: PMC2483934 The Yeast Spore Wall Enables Spores to Survive Passage through the Digestive Tract of Drosophila Alison E. Coluccio, Rachael K. Rodriguez, Maurice J. Kernan, and Aaron M. Neiman PMCID: PMC2478712 Complex Ecological Dynamics and Eradicability of the Vector Borne Macroparasitic Disease, Lymphatic Filariasis Manoj Gambhir and Edwin Michael PMCID: PMC2518518 Effector Genomics Accelerates Discovery and Functional Profiling of Potato Disease Resistance and Phytophthora Infestans Avirulence Genes Vivianne G. A. A. Vleeshouwers, Hendrik Rietman, Pavel Krenek, Nicolas Champouret, Carolyn Young, Sang-Keun Oh, Miqia Wang, Klaas Bouwmeester, Ben Vosman, Richard G. F. Visser, Evert Jacobsen, Francine Govers, Sophien Kamoun, and Edwin A. G. Van der Vossen PMCID: PMC2483939 Mathematical Analysis of Copy Number Variation in a DNA Sample Using Digital PCR on a Nanofluidic Device Simant Dube, Jian Qin, and Ramesh Ramakrishnan PMCID: PMC2483940 Receptor Tyrosine Kinase (RTK) Mediated Tyrosine Phosphor-Proteome from Drosophila S2 (ErbB1) Cells Reveals Novel Signaling Networks Srinivasan Krishnamoorthy PMCID: PMC2488400 No Major Change in vCJD Agent Strain after Secondary Transmission via Blood Transfusion Matthew T. Bishop, Diane L. Ritchie, Robert G. Will, James W. Ironside, Mark W. Head, Val Thomson, Moira Bruce, and Jean C. Manson PMCID: PMC2478718 An Expanded Inventory of Conserved Meiotic Genes Provides Evidence for Sex in Trichomonas vaginalis Shehre-Banoo Malik, Arthur W. Pightling, Lauren M. Stefaniak, Andrew M. Schurko, and John M. Logsdon, Jr PMCID: PMC2488364 Genome-Wide Survey and Expression Profiling of CCCH-Zinc Finger Family Reveals a Functional Module in Macrophage Activation Jian Liang, Wenjun Song, Gail Tromp, Pappachan E. Kolattukudy, and Mingui Fu PMCID: PMC2478707 HER2 Oncogenic Function Escapes EGFR Tyrosine Kinase Inhibitors via Activation of Alternative HER Receptors in Breast Cancer Cells Anthony Kong, Véronique Calleja, Pierre Leboucher, Adrian Harris, Peter J. Parker, and Banafshé Larijani PMCID: PMC2483931 High-Throughput Isolation and Mapping of C. elegans Mutants Susceptible to Pathogen Infection Laura E. Fuhrman, Kevin V. Shianna, and Alejandro Aballay PMCID: PMC2478710 Preservation of Genes Involved in Sterol Metabolism in Cholesterol Auxotrophs: Facts and Hypotheses Giovanna Vinci, Xuhua Xia, and Reiner A. Veitia PMCID: PMC2478713 Eye Movements Predict Recollective Experience Tali Sharot, Matthew L. Davidson, Meredith M. Carson, and Elizabeth A. Phelps PMCID: PMC2478711 Germline EPHB2 Receptor Variants in Familial Colorectal Cancer George Zogopoulos, Claus Jorgensen, Julinor Bacani, Alexandre Montpetit, Pierre Lepage, Vincent Ferretti, Lauren Chad, Subani Selvarajah, Brent Zanke, Thomas J. Hudson, Tony Pawson, and Steven Gallinger PMCID: PMC2483346 C4b-Binding Protein Is Present in Affected Areas of Myocardial Infarction during the Acute Inflammatory Phase and Covers a Larger Area than C3 Leendert A. Trouw, Marcin Okroj, Koba Kupreishvili, Göran Landberg, Bengt Johansson, Hans W. M. Niessen, and Anna M. Blom PMCID: PMC2483938 Meiotic Recombination Hotspots of Fission Yeast Are Directed to Loci that Express Non-Coding RNA Wayne P. Wahls, Eric R. Siegel, and Mari K. Davidson PMCID: PMC2483352 Generation of Breast Cancer Stem Cells through Epithelial-Mesenchymal Transition Anne-Pierre Morel, Marjory Lièvre, Clémence Thomas, George Hinkal, Stéphane Ansieau, and Alain Puisieux PMCID: PMC2492808 Heat Stress Enhances the Accumulation of Polyadenylated Mitochondrial Transcripts in Arabidopsis thaliana Alessio Adamo, John W. Pinney, Andrea Kunova, David R. Westhead, and Peter Meyer PMCID: PMC2483354 Up-Regulation of Mitochondrial Activity and Acquirement of Brown Adipose Tissue-Like Property in the White Adipose Tissue of Fsp27 Deficient Mice Shen Yon Toh, Jingyi Gong, Guoli Du, John Zhong Li, Shuqun Yang, Jing Ye, Huilan Yao, Yinxin Zhang, Bofu Xue, Qing Li, Hongyuan Yang, Zilong Wen, and Peng Li PMCID: PMC2483355 Investigation of the Role of Mitochondrial DNA in Multiple Sclerosis Susceptibility Maria Ban, Joanna Elson, Amie Walton, Douglas Turnbull, Alastair Compston, Patrick Chinnery, and Stephen Sawcer PMCID: PMC2494944 Boc5, a Non-Peptidic Glucagon-Like Peptide-1 Receptor Agonist, Invokes Sustained Glycemic Control and Weight Loss in Diabetic Mice Haoran Su, Min He, Hongmei Li, Qing Liu, Jia Wang, Yiqian Wang, Weiwei Gao, Ling Zhou, Jiayu Liao, Andrew A. Young, and Ming-Wei Wang PMCID: PMC2483413 Wingless Signalling Alters the Levels, Subcellular Distribution and Dynamics of Armadillo and E-Cadherin in Third Instar Larval Wing Imaginal Discs Ildiko M. L. Somorjai and Alfonso Martinez-Arias PMCID: PMC2483348 Protein Crystals in Adenovirus Type 5-Infected Cells: Requirements for Intranuclear Crystallogenesis, Structural and Functional Analysis Laure Franqueville, Petra Henning, Maria Magnusson, Emmanuelle Vigne, Guy Schoehn, Maria E. Blair-Zajdel, Nagy Habib, Leif Lindholm, G. Eric Blair, Saw See Hong, and Pierre Boulanger PMCID: PMC2488365 Analysis of 17,576 Potentially Functional SNPs in Three Case–Control Studies of Myocardial Infarction Dov Shiffman, John P. Kane, Judy Z. Louie, Andre R. Arellano, David A. Ross, Joseph J. Catanese, Mary J. Malloy, Stephen G. Ellis, and James J. Devlin PMCID: PMC2483345 Evolutionary Origins and Functions of the Carotenoid Biosynthetic Pathway in Marine Diatoms Sacha Coesel, Miroslav Oborník, Joao Varela, Angela Falciatore, and Chris Bowler PMCID: PMC2483416 Relative Crystallinity of Plant Biomass: Studies on Assembly, Adaptation and Acclimation Darby Harris and Seth DeBolt PMCID: PMC2483349 Cytokine Plasma Levels: Reliable Predictors for Radiation Pneumonitis? Claudia E. Rübe, Jan Palm, Michael Erren, Jochen Fleckenstein, Jochem König, Klaus Remberger, and Christian Rübe PMCID: PMC2483418 Transthyretin Protects against A-Beta Peptide Toxicity by Proteolytic Cleavage of the Peptide: A Mechanism Sensitive to the Kunitz Protease Inhibitor Rita Costa, Frederico Ferreira-da-Silva, Maria J. Saraiva, and Isabel Cardoso PMCID: PMC2483353 Neuromagnetic Evidence for Early Auditory Restoration of Fundamental Pitch Philip J. Monahan, Kevin de Souza, and William J. Idsardi PMCID: PMC2483422 Superposition of Transcriptional Behaviors Determines Gene State Sol Efroni, Liran Carmel, Carl G. Schaefer, and Kenneth H. Buetow PMCID: PMC2488367 A RasGAP SH3 Peptide Aptamer Inhibits RasGAP-Aurora Interaction and Induces Caspase-Independent Tumor Cell Death Perayot Pamonsinlapatham, Réda Hadj-Slimane, Françoise Raynaud, Marc Bickle, Claudine Corneloup, Audrey Barthelaix, Yves Lepelletier, Perrine Mercier, Matthieu Schapira, Jérôme Samson, Anne-Laure Mathieu, Nicolas Hugo, Olivier Moncorgé, Ivan Mikaelian, Sylvie Dufour, Christiane Garbay, and Pierre Colas PMCID: PMC2483412 Long Term Outcome of Severe Anaemia in Malawian Children Kamija S. Phiri, Job C. J. Calis, Brian Faragher, Ernest Nkhoma, Kondwani Ng'oma, Bridget Mangochi, Malcolm E. Molyneux, and Michaël Boele van Hensbroek PMCID: PMC2488370 Dorsomorphin, a Selective Small Molecule Inhibitor of BMP Signaling, Promotes Cardiomyogenesis in Embryonic Stem Cells Jijun Hao, Marie A. Daleo, Clare K. Murphy, Paul B. Yu, Joshua N. Ho, Jianyong Hu, Randall T. Peterson, Antonis K. Hatzopoulos, and Charles C. Hong PMCID: PMC2483414 Maintenance of Large Subpopulations of Differentiated CD8 T-Cells Two Years after Cytomegalovirus Infection in Gambian Infants David J. C. Miles, Marianne van der Sande, David Jeffries, Steve Kaye, Olubukola Ojuola, Mariama Sanneh, Momodou Cox, Melba S. Palmero, Ebrima S. Touray, Pauline Waight, Sarah Rowland-Jones, Hilton Whittle, and Arnaud Marchant PMCID: PMC2483415 Disruption of Neuronal Autophagy by Infected Microglia Results in Neurodegeneration Mehrdad Alirezaei, William B. Kiosses, Claudia T. Flynn, Nathan R. Brady, and Howard S. Fox PMCID: PMC2483417 Genes to Diseases (G2D) Computational Method to Identify Asthma Candidate Genes Karine Tremblay, Mathieu Lemire, Camille Potvin, Alexandre Tremblay, Gary M. Hunninghake, Benjamin A. Raby, Thomas J. Hudson, Carolina Perez-Iratxeta, Miguel A. Andrade-Navarro, and Catherine Laprise PMCID: PMC2488373 Molecular Detection of Multiple Emerging Pathogens in Sputa from Cystic Fibrosis Patients Fadi Bittar, Hervé Richet, Jean-Christophe Dubus, Martine Reynaud-Gaubert, Nathalie Stremler, Jacques Sarles, Didier Raoult, and Jean-Marc Rolain PMCID: PMC2483419 Consumption of Bt Maize Pollen Expressing Cry1Ab or Cry3Bb1 Does Not Harm Adult Green Lacewings, Chrysoperla carnea (Neuroptera: Chrysopidae) Yunhe Li, Michael Meissle, and Jörg Romeis PMCID: PMC2488376 Evidence from GC-TRFLP that Bacterial Communities in Soil Are Lognormally Distributed James R. Doroghazi and Daniel H. Buckley PMCID: PMC2483420 The Continuous Wagon Wheel Illusion and the ‘When’ Pathway of the Right Parietal Lobe: A Repetitive Transcranial Magnetic Stimulation Study Rufin VanRullen, Alvaro Pascual-Leone, and Lorella Battelli PMCID: PMC2483421 Identification of a Heritable Polymorphism in Bovine PRNP Associated with Genetic Transmissible Spongiform Encephalopathy: Evidence of Heritable BSE Eric M. Nicholson, Brian W. Brunelle, Juergen A. Richt, Marcus E. Kehrli, Jr, and Justin J. Greenlee PMCID: PMC2488391 Surfactants as Microbicides and Contraceptive Agents: A Systematic In Vitro Study Otilia V. Vieira, Diego O. Hartmann, Carla M. P. Cardoso, Daniel Oberdoerfer, Marta Baptista, Manuel A. S. Santos, Luis Almeida, João Ramalho-Santos, and Winchil L. C. Vaz PMCID: PMC2488369 Differentiating Sensitivity of Post-Stimulus Undershoot under Diffusion Weighting: Implication of Vascular and Neuronal Hierarchy Todd B. Harshbarger and Allen W. Song PMCID: PMC2500218 Evidence for the Mitochondrial Lactate Oxidation Complex in Rat Neurons: Demonstration of an Essential Component of Brain Lactate Shuttles Takeshi Hashimoto, Rajaa Hussien, Hyung-Sook Cho, Daniela Kaufer, and George A. Brooks PMCID: PMC2488371 Live Imaging of Cysteine-Cathepsin Activity Reveals Dynamics of Focal Inflammation, Angiogenesis, and Polyp Growth Elias Gounaris, Ching H. Tung, Clifford Restaino, René Maehr, Rainer Kohler, Johanna A. Joyce, Hidde L. Plough, Terrence A. Barrett, Ralph Weissleder, and Khashayarsha Khazaie PMCID: PMC2488397 Systemic Therapy for Cervical Cancer with Potentially Regulatable Oncolytic Adenoviruses Anna Kanerva, Sergio Lavilla-Alonso, Mari Raki, Lotta Kangasniemi, Gerd J. Bauerschmitz, Koichi Takayama, Ari Ristimäki, Renee A. Desmond, and Akseli Hemminki PMCID: PMC2500220 Identifying Determinants of Cullin Binding Specificity Among the Three Functionally Different Drosophila melanogaster Roc Proteins via Domain Swapping Patrick J. Reynolds, Jeffrey R. Simms, and Robert J. Duronio PMCID: PMC2500221 A Dynamic Stochastic Model for DNA Replication Initiation in Early Embryos Arach Goldar, Hélène Labit, Kathrin Marheineke, and Olivier Hyrien PMCID: PMC2488399 Study of a Synthetic Human Olfactory Receptor 17-4: Expression and Purification from an Inducible Mammalian Cell Line Brian L. Cook, Karin E. Ernberg, Hyeyoun Chung, and Shuguang Zhang PMCID: PMC2488374 Safety and Immunogenicity of the Candidate Tuberculosis Vaccine MVA85A in West Africa Roger H. Brookes, Philip C. Hill, Patrick K. Owiafe, Hannah B. Ibanga, David J. Jeffries, Simon A. Donkor, Helen A. Fletcher, Abdulrahman S. Hammond, Christian Lienhardt, Richard A. Adegbola, Helen McShane, and Adrian V. S. Hill PMCID: PMC2488375 Noise-Driven Stem Cell and Progenitor Population Dynamics Martin Hoffmann, Hannah H. Chang, Sui Huang, Donald E. Ingber, Markus Loeffler, and Joerg Galle PMCID: PMC2488392 Replication and Transmission of H9N2 Influenza Viruses in Ferrets: Evaluation of Pandemic Potential Hongquan Wan, Erin M. Sorrell, Haichen Song, Md Jaber Hossain, Gloria Ramirez-Nieto, Isabella Monne, James Stevens, Giovanni Cattoli, Ilaria Capua, Li-Mei Chen, Ruben O. Donis, Julia Busch, James C. Paulson, Christy Brockwell, Richard Webby, Jorge Blanco, Mohammad Q. Al-Natour, and Daniel R. Perez PMCID: PMC2500216 Microarray Analysis of Human Monocytes Infected with Francisella tularensis Identifies New Targets of Host Response Subversion Jonathan P. Butchar, Thomas J. Cremer, Corey D. Clay, Mikhail A. Gavrilin, Mark D. Wewers, Clay B. Marsh, Larry S. Schlesinger, and Susheela Tridandapani PMCID: PMC2488368 Assessing Agreement between Multiple Raters with Missing Rating Information, Applied to Breast Cancer Tumour Grading Thomas R. Fanshawe, Andrew G. Lynch, Ian O. Ellis, Andrew R. Green, and Rudolf Hanka PMCID: PMC2488396 P68 RNA Helicase (DDX5) Alters Activity of Cis- and Trans-Acting Factors of the Alternative Splicing of H-Ras Maria Camats, Sonia Guil, Mariette Kokolo, and Montse Bach-Elias PMCID: PMC2491553 Concurrence of Danish Dementia and Cataract: Insights from the Interactions of Dementia Associated Peptides with Eye Lens α-Crystallin Ira Surolia, Sharmistha Sinha, Debi Prasad Sarkar, P. Yadagiri Reddy, G. Bhanuprakash Reddy, and Avadhesha Surolia PMCID: PMC2488398 Ocean Surface Winds Drive Dynamics of Transoceanic Aerial Movements Ángel M. Felicísimo, Jesús Muñoz, and Jacob González-Solis PMCID: PMC2491555 From Stop to Start: Tandem Gene Arrangement, Copy Number and Trans-Splicing Sites in the Dinoflagellate Amphidinium carterae Tsvetan R. Bachvaroff and Allen R. Place PMCID: PMC2488372 Liposomal Packaging Generates Wnt Protein with In Vivo Biological Activity Nathan T. Morrell, Philipp Leucht, Ludan Zhao, Jae-Beom Kim, Derk ten Berge, Karthik Ponnusamy, A. Lyonel Carre, Henryk Dudek, Marie Zachlederova, Michael McElhaney, Shirley Brunton, Janet Gunzner, Marinella Callow, Paul Polakis, Mike Costa, Xiaoyan M. Zhang, Jill A. Helms, and Roel Nusse PMCID: PMC2515347 Claims of Potential Expansion throughout the U.S. by Invasive Python Species Are Contradicted by Ecological Niche Models R. Alexander Pyron, Frank T. Burbrink, and Timothy J. Guiher PMCID: PMC2490718 Oil and Gas Projects in the Western Amazon: Threats to Wilderness, Biodiversity, and Indigenous Peoples Matt Finer, Clinton N. Jenkins, Stuart L. Pimm, Brian Keane, and Carl Ross PMCID: PMC2518521 A Fluorescent Glycolipid-Binding Peptide Probe Traces Cholesterol Dependent Microdomain-Derived Trafficking Pathways Steffen Steinert, Esther Lee, Guillaume Tresset, Dawei Zhang, Ralf Hortsch, Richard Wetzel, Sarita Hebbar, Jeyapriya Raja Sundram, Sashi Kesavapany, Elke Boschke, and Rachel Kraut PMCID: PMC2518528 Murine Mesenchymal Stem Cells Exhibit a Restricted Repertoire of Functional Chemokine Receptors: Comparison with Human Giselle Chamberlain, Karina Wright, Antal Rot, Brian Ashton, and Jim Middleton PMCID: PMC2488395 Impaired Adult Neurogenesis in the Dentate Gyrus of a Triple Transgenic Mouse Model of Alzheimer's Disease José J. Rodríguez, Victoria C. Jones, Masashi Tabuchi, Stuart M. Allan, Elysse M. Knight, Frank M. LaFerla, Salvatore Oddo, and Alexei Verkhratsky PMCID: PMC2492828 Global Eradication of Lymphatic Filariasis: The Value of Chronic Disease Control in Parasite Elimination Programmes Edwin Michael, Mwele N. Malecela, Mihail Zervos, and James W. Kazura PMCID: PMC2490717 Improved Elucidation of Biological Processes Linked to Diabetic Nephropathy by Single Probe-Based Microarray Data Analysis Clemens D. Cohen, Maja T. Lindenmeyer, Felix Eichinger, Alexander Hahn, Martin Seifert, Anton G. Moll, Holger Schmid, Eva Kiss, Elisabeth Gröne, Hermann-Josef Gröne, Matthias Kretzler, Thomas Werner, and Peter J. Nelson PMCID: PMC2493035 A Thirty Million Year-Old Inherited Heteroplasmy Vincent Doublet, Catherine Souty-Grosset, Didier Bouchon, Richard Cordaux, and Isabelle Marcadé PMCID: PMC2491557 A Common Anterior Insula Representation of Disgust Observation, Experience and Imagination Shows Divergent Functional Connectivity Pathways Mbemba Jabbi, Jojanneke Bastiaansen, and Christian Keysers PMCID: PMC2491556 Phase 1 Trial of AMA1-C1/Alhydrogel plus CPG 7909: An Asexual Blood-Stage Vaccine for Plasmodium falciparum Malaria Gregory E. D. Mullen, Ruth D. Ellis, Kazutoyo Miura, Elissa Malkin, Caroline Nolan, Mhorag Hay, Michael P. Fay, Allan Saul, Daming Zhu, Kelly Rausch, Samuel Moretz, Hong Zhou, Carole A. Long, Louis H. Miller, and John Treanor PMCID: PMC2491586 Variations in the Ghrelin Receptor Gene Associate with Obesity and Glucose Metabolism in Individuals with Impaired Glucose Tolerance Ursula Mager, Tatjana Degenhardt, Leena Pulkkinen, Marjukka Kolehmainen, Anna-Maija Tolppanen, Jaana Lindström, Johan G. Eriksson, Carsten Carlberg, Jaakko Tuomilehto, Matti Uusitupa, and for the Finnish Diabetes Prevention Study Group PMCID: PMC2491902 Control of Bone Mass and Remodeling by PTH Receptor Signaling in Osteocytes Charles A. O'Brien, Lilian I. Plotkin, Carlo Galli, Joseph J. Goellner, Arancha R. Gortazar, Matthew R. Allen, Alexander G. Robling, Mary Bouxsein, Ernestina Schipani, Charles H. Turner, Robert L. Jilka, Robert S. Weinstein, Stavros C. Manolagas, and Teresita Bellido PMCID: PMC2491588 How Do Humans Control Physiological Strain during Strenuous Endurance Exercise? Jonathan Esteve-Lanao, Alejandro Lucia, Jos J. deKoning, and Carl Foster PMCID: PMC2491903 The Role of bZIP Transcription Factors in Green Plant Evolution: Adaptive Features Emerging from Four Founder Genes Luiz Gustavo Guedes Corrêa, Diego Mauricio Riaño-Pachón, Carlos Guerra Schrago, Renato Vicentini dos Santos, Bernd Mueller-Roeber, and Michel Vincentz PMCID: PMC2492810 Comparative Metagenomics Reveals Host Specific Metavirulomes and Horizontal Gene Transfer Elements in the Chicken Cecum Microbiome Ani Qu, Jennifer M. Brulc, Melissa K. Wilson, Bibiana F. Law, James R. Theoret, Lynn A. Joens, Michael E. Konkel, Florent Angly, Elizabeth A. Dinsdale, Robert A. Edwards, Karen E. Nelson, and Bryan A. White PMCID: PMC2492807 A Semantic Web Management Model for Integrative Biomedical Informatics Helena F. Deus, Romesh Stanislaus, Diogo F. Veiga, Carmen Behrens, Ignacio I. Wistuba, John D. Minna, Harold R. Garner, Stephen G. Swisher, Jack A. Roth, Arlene M. Correa, Bradley Broom, Kevin Coombes, Allen Chang, Lynn H. Vogel, and Jonas S. Almeida PMCID: PMC2491554 CRPV Genomes with Synonymous Codon Optimizations in the CRPV E7 Gene Show Phenotypic Differences in Growth and Altered Immunity upon E7 Vaccination Nancy M. Cladel, Jiafen Hu, Karla K. Balogh, and Neil D. Christensen PMCID: PMC2491898 Intriguing Balancing Selection on the Intron 5 Region of LMBR1 in Human Population Fang He, Dong-Dong Wu, Qing-Peng Kong, and Ya-Ping Zhang PMCID: PMC2492787 Sleep Modulates the Neural Substrates of Both Spatial and Contextual Memory Consolidation Géraldine Rauchs, Pierre Orban, Christina Schmidt, Geneviève Albouy, Evelyne Balteau, Christian Degueldre, Caroline Schnackers, Virginie Sterpenich, Gilberte Tinguely, André Luxen, Pierre Maquet, and Philippe Peigneux PMCID: PMC2491899 Genetic Requirement for Pneumococcal Ear Infection Huaiqing Chen, Yueyun, Jun Yang, Christopher J. O'Brien, Scott L. Lee, Joseph E. Mazurkiewicz, Sauli Haataja, Jing-Hua Yan, George F. Gao, and Jing-Ren Zhang PMCID: PMC2593789 Tracing Functional Antigen-Specific CCR6+ Th17 Cells after Vaccination Johann Pötzl, Catherine Botteron, Eugen Tausch, Xiomara Pedré, André M. Mueller, Daniela N. Männel, and Anja Lechner PMCID: PMC2491584 Suppression of HIV-Specific and Allogeneic T Cell Activation by Human Regulatory T Cells Is Dependent on the Strength of Signals Amanda K. Antons, Rui Wang, Spyros A. Kalams, and Derya Unutmaz PMCID: PMC2490715 The CAPN10 Gene Is Associated with Insulin Resistance Phenotypes in the Spanish Population María E. Sáez, José L. González-Sánchez, Reposo Ramírez-Lorca, María T. Martínez-Larrad, Carina Zabena, Alejandro González, Francisco J. Morón, Agustín Ruiz, and Manuel Serrano-Ríos PMCID: PMC2495037 Pre-Clinical Evaluation of a Novel Nanoemulsion-Based Hepatitis B Mucosal Vaccine Paul E. Makidon, Anna U. Bielinska, Shraddha S. Nigavekar, Katarzyna W. Janczak, Jessica Knowlton, Alison J. Scott, Nicholas Mank, Zhengyi Cao, Sivaprakash Rathinavelu, Michael R. Beer, J. Erby Wilkinson, Luz P. Blanco, Jeffrey J. Landers, and James R. Baker, Jr PMCID: PMC2496893 Identification and Functional Characterization of Gene Components of Type VI Secretion System in Bacterial Genomes Sakshi Shrivastava and Sharmila S. Mande PMCID: PMC2492809 A Non-Death Role of the Yeast Metacaspase: Yca1p Alters Cell Cycle Dynamics Robin E. C. Lee, Lawrence G. Puente, Mads Kærn, and Lynn A. Megeney PMCID: PMC2493032 Management of Extensively Drug-Resistant Tuberculosis in Peru: Cure Is Possible Cesar A. Bonilla, Aldo Crossa, Hector O. Jave, Carole D. Mitnick, Ronal B. Jamanca, Cesar Herrera, Luis Asencios, Alberto Mendoza, Jaime Bayona, Matteo Zignol, and Ernesto Jaramillo PMCID: PMC2495032 FTO Gene Associated Fatness in Relation to Body Fat Distribution and Metabolic Traits throughout a Broad Range of Fatness Sofia I. I. Kring, Claus Holst, Esther Zimmermann, Tine Jess, Tina Berentzen, Søren Toubro, Torben Hansen, Arne Astrup, Oluf Pedersen, and Thorkild I. A. Sørensen PMCID: PMC2493033 Matrix Metalloproteinase 13 Is Induced in Fibroblasts in Polyomavirus Middle T Antigen-Driven Mammary Carcinoma without Influencing Tumor Progression Boye S. Nielsen, Mikala Egeblad, Fritz Rank, Hanne A. Askautrud, Caroline J. Pennington, Tanja X. Pedersen, Ib J. Christensen, Dylan R. Edwards, Zena Werb, and Leif R. Lund PMCID: PMC2493034 Controlling Population Evolution in the Laboratory to Evaluate Methods of Historical Inference Patrick Mardulyn, Marie-Anne Vaesen, and Michel C. Milinkovitch PMCID: PMC2491900 HIV-Induced Type I Interferon and Tryptophan Catabolism Drive T Cell Dysfunction Despite Phenotypic Activation Adriano Boasso, Andrew W. Hardy, Stephanie A. Anderson, Matthew J. Dolan, and Gene M. Shearer PMCID: PMC2491901 Pathophysiological, Genetic and Gene Expression Features of a Novel Rodent Model of the Cardio-Metabolic Syndrome Robert H. Wallis, Stephan C. Collins, Pamela J. Kaisaki, Karène Argoud, Steven P. Wilder, Karin J. Wallace, Massimiliano Ria, Alain Ktorza, Patrik Rorsman, Marie-Thérèse Bihoreau, and Dominique Gauguier PMCID: PMC2500170 Source of Sustained Voltage Difference between the Xylem of a Potted Ficus benjamina Tree and Its Soil Christopher J. Love, Shuguang Zhang, and Andreas Mershin PMCID: PMC2493036 Anthrax Toxins Inhibit Neutrophil Signaling Pathways in Brain Endothelium and Contribute to the Pathogenesis of Meningitis Nina M. van Sorge, Celia M. Ebrahimi, Shauna M. McGillivray, Darin Quach, Mojgan Sabet, Donald G. Guiney, and Kelly S. Doran PMCID: PMC2493037 Meta-Analysis of Microarray Studies Reveals a Novel Hematopoietic Progenitor Cell Signature and Demonstrates Feasibility of Inter-Platform Data Integration Davendra Sohal, Andrew Yeatts, Kenny Ye, Andrea Pellagatti, Li Zhou, Perry Pahanish, Yongkai Mo, Tushar Bhagat, John Mariadason, Jacqueline Boultwood, Ari Melnick, John Greally, and Amit Verma PMCID: PMC2495035 Extreme Clonality in Lymphoblastoid Cell Lines with Implications for Allele Specific Expression Analyses Vincent Plagnol, Elif Uz, Chris Wallace, Helen Stevens, David Clayton, Tayfun Ozcelik, and John A. Todd PMCID: PMC2494943 Towards Zero Training for Brain-Computer Interfacing Matthias Krauledat, Michael Tangermann, Benjamin Blankertz, and Klaus-Robert Müller PMCID: PMC2500157 Relaxation of Selective Constraints Causes Independent Selenoprotein Extinction in Insect Genomes Charles E. Chapple and Roderic Guigó PMCID: PMC2500217 Prion Infected Meat-and-Bone Meal Is Still Infectious after Biodiesel Production Cathrin E. Bruederle, Robert M. Hnasko, Thomas Kraemer, Rafael A. Garcia, Michael J. Haas, William N. Marmer, and John Mark Carter PMCID: PMC2493038 HIV Seroprevalence among Tuberculosis Patients in India, 2006–2007 Neeraj Raizada, Lakbir Singh Chauhan, Ajay Khera, Jotna Sokhey, D. Fraser Wares, Suvanand Sahu, Rahul Thakur, and Puneet Kumar Dewan PMCID: PMC2495033 Inhibition of Electrical Activity by Retroviral Infection with Kir2.1 Transgenes Disrupts Electrical Differentiation of Motoneurons Yone Jung Yoon, Hisashi Kominami, Thomas Trimarchi, and Miguel Martin-Caraballo PMCID: PMC2500219 Delay-Induced Transient Increase and Heterogeneity in Gene Expression in Negatively Auto-Regulated Gene Circuits R. Maithreye, Ram Rup Sarkar, Veena K. Parnaik, and Somdatta Sinha PMCID: PMC2494610 Type III Secretion System Genes of Dickeya dadantii 3937 Are Induced by Plant Phenolic Acids Shihui Yang, Quan Peng, Michael San Francisco, Yongjun Wang, Quan Zeng, and Ching-Hong Yang PMCID: PMC2494611 Agrobacterium-Mediated Transformation of Tomato Elicits Unexpected Flower Phenotypes with Similar Gene Expression Profiles Yi-Hong Wang and Michael A. Campbell PMCID: PMC2493039 Influence of Prior Influenza Vaccination on Antibody and B-Cell Responses Sanae Sasaki, Xiao-Song He, Tyson H. Holmes, Cornelia L. Dekker, George W. Kemble, Ann. M. Arvin, and Harry B. Greenberg PMCID: PMC2500171 I–II Loop Structural Determinants in the Gating and Surface Expression of Low Voltage-Activated Calcium Channels Joel P. Baumgart, Iuliia Vitko, Isabelle Bidaud, Artem Kondratskyi, Philippe Lory, and Edward Perez-Reyes PMCID: PMC2495038 T Cells' Immunological Synapses Induce Polarization of Brain Astrocytes In Vivo and In Vitro: A Novel Astrocyte Response Mechanism to Cellular Injury Carlos Barcia, Nicholas S. R. Sanderson, Robert J. Barrett, Kolja Wawrowsky, Kurt M. Kroeger, Mariana Puntel, Chunyan Liu, Maria G. Castro, and Pedro R. Lowenstein PMCID: PMC2496894 Freeze-Dried Somatic Cells Direct Embryonic Development after Nuclear Transfer Pasqualino Loi, Kazutsugu Matsukawa, Grazyna Ptak, Michael Clinton, Josef Fulka, Jr., Yehudith Nathan, and Amir Arav PMCID: PMC2500158 Fast Homeostatic Plasticity of Inhibition via Activity-Dependent Vesicular Filling Kristin Hartmann, Claus Bruehl, Tatyana Golovko, and Andreas Draguhn PMCID: PMC2495031 Elevated Peripheral Visfatin Levels in Narcoleptic Patients Norbert Dahmen, Nina Manderscheid, Jana Helfrich, Petra B. Musholt, Thomas Forst, Andreas Pfützner, and Alice Engel PMCID: PMC2500162 Origin of Co-Expression Patterns in E.coli and S.cerevisiae Emerging from Reverse Engineering Algorithms Mattia Zampieri, Nicola Soranzo, Daniele Bianchini, and Claudio Altafini PMCID: PMC2500178 The GCR2 Gene Family Is Not Required for ABA Control of Seed Germination and Early Seedling Development in Arabidopsis Jianjun Guo, Qingning Zeng, Mohammad Emami, Brian E. Ellis, and Jin-Gui Chen PMCID: PMC2500181 Generation and Validation of a Shewanella oneidensis MR-1 Clone Set for Protein Expression and Phage Display Haichun Gao, Donna Pattison, Tingfen Yan, Dawn M. Klingeman, Xiaohu Wang, Joseph Petrosino, Lisa Hemphill, Xiufeng Wan, Adam B. Leaphart, George M. Weinstock, Timothy Palzkill, and Jizhong Zhou PMCID: PMC2500165 DnaC Inactivation in Escherichia coli K-12 Induces the SOS Response and Expression of Nucleotide Biosynthesis Genes Anders Løbner-Olesen, Monika Slominska-Wojewodzka, Flemming G. Hansen, and Martin G. Marinus PMCID: PMC2500167 Clinical Characteristics of 26 Human Cases of Highly Pathogenic Avian Influenza A (H5N1) Virus Infection in China Hongjie Yu, Zhancheng Gao, Zijian Feng, Yuelong Shu, Nijuan Xiang, Lei Zhou, Yang Huai, Luzhao Feng, Zhibin Peng, Zhongjie Li, Cuiling Xu, Junhua Li, Chengping Hu, Qun Li, Xiaoling Xu, Xuecheng Liu, Zigui Liu, Longshan Xu, Yusheng Chen, Huiming Luo, Liping Wei, Xianfeng Zhang, Jianbao Xin, Junqiao Guo, Qiuyue Wang, Zhengan Yuan, Longnv Zhou, Kunzhao Zhang, Wei Zhang, Jinye Yang, Xiaoning Zhong, Shichang Xia, Lanjuan Li, Jinquan Cheng, Erdang Ma, Pingping He, Shui Shan Lee, Yu Wang, Timothy M. Uyeki, and Weizhong Yang PMCID: PMC2515635 Lifelong Reduction of LDL-Cholesterol Related to a Common Variant in the LDL-Receptor Gene Decreases the Risk of Coronary Artery Disease—A Mendelian Randomisation Study Patrick Linsel-Nitschke, Anika Götz, Jeanette Erdmann, Ingrid Braenne, Peter Braund, Christian Hengstenberg, Klaus Stark, Marcus Fischer, Stefan Schreiber, Nour Eddine El Mokhtari, Arne Schaefer, Jürgen Schrezenmeier, Diana Rubin, Anke Hinney, Thomas Reinehr, Christian Roth, Jan Ortlepp, Peter Hanrath, Alistair S. Hall, Massimo Mangino, Wolfgang Lieb, Claudia Lamina, Iris M. Heid, Angela Doering, Christian Gieger, Annette Peters, Thomas Meitinger, H.-Erich Wichmann, Inke R. König, Andreas Ziegler, Florian Kronenberg, Nilesh J. Samani, Heribert Schunkert, and for the Wellcome Trust Case Control Consortium (WTCCC) and the Cardiogenics Consortium PMCID: PMC2500189 Identification of Functional Networks of Estrogen- and c-Myc-Responsive Genes and Their Relationship to Response to Tamoxifen Therapy in Breast Cancer Elizabeth A. Musgrove, C. Marcelo Sergio, Sherene Loi, Claire K. Inman, Luke R. Anderson, M. Chehani Alles, Mark Pinese, C. Elizabeth Caldon, Judith Schütte, Margaret Gardiner-Garden, Christopher J. Ormandy, Grant McArthur, Alison J. Butt, and Robert L. Sutherland PMCID: PMC2496892 Lamin A/C Is a Risk Biomarker in Colorectal Cancer Naomi D. Willis, Thomas R. Cox, Syed F. Rahman-Casañs, Kim Smits, Stefan A. Przyborski, Piet van den Brandt, Manon van Engeland, Matty Weijenberg, Robert G. Wilson, Adriaan de Bruïne, and Christopher J. Hutchison PMCID: PMC2496895 Phase Shift from a Coral to a Corallimorph-Dominated Reef Associated with a Shipwreck on Palmyra Atoll Thierry M. Work, Greta S. Aeby, and James E. Maragos PMCID: PMC2500175 OPCML Is a Broad Tumor Suppressor for Multiple Carcinomas and Lymphomas with Frequently Epigenetic Inactivation Yan Cui, Ying Ying, Andrew van Hasselt, Ka Man Ng, Jun Yu, Qian Zhang, Jie Jin, Dingxie Liu, Johng S. Rhim, Sun Young Rha, Myriam Loyo, Anthony T. C. Chan, Gopesh Srivastava, George S. W. Tsao, Grant C. Sellar, Joseph J. Y. Sung, David Sidransky, and Qian Tao PMCID: PMC2500176 A High-Temporal Resolution Technology for Dynamic Proteomic Analysis Based on 35S Labeling Zhao Zhang, Jian Chen, Fuzheng Guo, Liren He, Yizhou Wu, Changqing Zeng, Xueyuan Xiao, and Dacheng He PMCID: PMC2500177 Resource Competition Triggers the Co-Evolution of Long Tongues and Deep Corolla Tubes Miguel A. Rodríguez-Gironés and Ana L. Llandres PMCID: PMC2500161 Adaptive Melanin Response of the Soil Fungus Aspergillus niger to UV Radiation Stress at “Evolution Canyon”, Mount Carmel, Israel Natarajan Singaravelan, Isabella Grishkan, Alex Beharav, Kazumasa Wakamatsu, Shosuke Ito, and Eviatar Nevo PMCID: PMC2500164 Prognostic Breast Cancer Signature Identified from 3D Culture Model Accurately Predicts Clinical Outcome across Independent Datasets Katherine J. Martin, Denis R. Patrick, Mina J. Bissell, and Marcia V. Fournier PMCID: PMC2500166 Lakeside Cemeteries in the Sahara: 5000 Years of Holocene Population and Environmental Change Paul C. Sereno, Elena A. A. Garcea, Hélène Jousse, Christopher M. Stojanowski, Jean-François Saliège, Abdoulaye Maga, Oumarou A. Ide, Kelly J. Knudson, Anna Maria Mercuri, Thomas W. Stafford, Jr., Thomas G. Kaye, Carlo Giraudi, Isabella Massamba N'siala, Enzo Cocca, Hannah M. Moots, Didier B. Dutheil, and Jeffrey P. Stivers PMCID: PMC2515196 The Ergogenic Effect of Recombinant Human Erythropoietin on  O 2max Depends on the Severity of Arterial Hypoxemia Paul Robach, Jose A. L. Calbet, Jonas J. Thomsen, Robert Boushel, Pascal Mollard, Peter Rasmussen, and Carsten Lundby PMCID: PMC2500186 The Silkworm (Bombyx mori) microRNAs and Their Expressions in Multiple Developmental Stages Xiaomin Yu, Qing Zhou, Sung-Chou Li, Qibin Luo, Yimei Cai, Wen-chang Lin, Huan Chen, Yue Yang, Songnian Hu, and Jun Yu PMCID: PMC2500172 DNA-Free Recombinant SV40 Capsids Protect Mice from Acute Renal Failure by Inducing Stress Response, Survival Pathway and Apoptotic Arrest Veronika Butin-Israeli, Dotan Uzi, Mahmoud Abd-El-Latif, Galina Pizov, Arieh Eden, Yosef S. Haviv, and Ariella Oppenheim PMCID: PMC2515219 Evidence of the Importance of Host Habitat Use in Predicting the Dilution Effect of Wild Boar for Deer Exposure to Anaplasma spp Agustín Estrada-Peña, Pelayo Acevedo, Francisco Ruiz-Fons, Christian Gortázar, and José de la Fuente PMCID: PMC2500193 The Cellular Prion Protein PrPc Is Involved in the Proliferation of Epithelial Cells and in the Distribution of Junction-Associated Proteins Etienne Morel, Stéphane Fouquet, Carine Strup-Perrot, Cathy Pichol Thievend, Constance Petit, Damarys Loew, Anne-Marie Faussat, Lucile Yvernault, Martine Pinçon-Raymond, Jean Chambaz, Monique Rousset, Sophie Thenet, and Caroline Clair PMCID: PMC2500194 The Rho-Rock-Myosin Signaling Axis Determines Cell-Cell Integrity of Self-Renewing Pluripotent Stem Cells Nicole Harb, Trevor K. Archer, and Noboru Sato PMCID: PMC2500174 Stochastic and Regulatory Role of Chromatin Silencing in Genomic Response to Environmental Changes Jung Kyoon Choi, Sohyun Hwang, and Young-Joon Kim PMCID: PMC2500160 HIV Replication Enhances Production of Free Fatty Acids, Low Density Lipoproteins and Many Key Proteins Involved in Lipid Metabolism: A Proteomics Study Suraiya Rasheed, Jasper S. Yan, Alex Lau, and Arvan S. Chan PMCID: PMC2500163 The Correction of Eye Blink Artefacts in the EEG: A Comparison of Two Prominent Methods Sven Hoffmann and Michael Falkenstein PMCID: PMC2500159 Matched Filters, Mate Choice and the Evolution of Sexually Selected Traits Konstantinos Kostarakos, Manfred Hartbauer, and Heiner Römer PMCID: PMC2500168 Habitat-Specific Population Growth of a Farmland Bird Debora Arlt, Pär Forslund, Tobias Jeppsson, and Tomas Pärt PMCID: PMC2500169 Exon Expression Arrays as a Tool to Identify New Cancer Genes Mieke Schutte, Fons Elstrodt, Linda B. C. Bralten, Jord H. A. Nagel, Elza Duijm, Antoinette Hollestelle, Maartje J. Vuerhard, Marijke Wasielewski, Justine K. Peeters, Peter van der Spek, Peter A. Sillevis Smitt, and Pim J. French PMCID: PMC2500185 A Drosophila Smyd4 Homologue Is a Muscle-Specific Transcriptional Modulator Involved in Development Elizabeth C. Thompson and Andrew A. Travers PMCID: PMC2500188 Gene Expression Disruptions of Organism versus Organ in Drosophila Species Hybrids Daniel J. Catron and Mohamed A. F. Noor PMCID: PMC2500191 Borrelia burgdorferi Complement Regulator-Acquiring Surface Protein 2 Does Not Contribute to Complement Resistance or Host Infectivity Adam S. Coleman, Xiuli Yang, Manish Kumar, Xinyue Zhang, Kamoltip Promnares, Deborah Shroder, Melisha R. Kenedy, John F. Anderson, Darrin R. Akins, and Utpal Pal PMCID: PMC2526170 The Association of C-Reactive Protein and CRP Genotype with Coronary Heart Disease: Findings from Five Studies with 4,610 Cases amongst 18,637 Participants Debbie A. Lawlor, Roger M. Harbord, Nic J. Timpson, Gordon D. O. Lowe, Ann Rumley, Tom R. Gaunt, Ian Baker, John W. G. Yarnell, Mika Kivimäki, Meena Kumari, Paul E. Norman, Konrad Jamrozik, Graeme J. Hankey, Osvaldo P. Almeida, Leon Flicker, Nicole Warrington, Michael G. Marmot, Yoav Ben-Shlomo, Lyle J. Palmer, Ian N. M. Day, Shah Ebrahim, and George Davey Smith PMCID: PMC2507759 A Resource for Transcriptomic Analysis in the Mouse Brain Charles Plessy, Michela Fagiolini, Akiko Wagatsuma, Norihiro Harasawa, Takenobu Kuji, Atsuko Asaka-Oba, Yukari Kanzaki, Sayaka Fujishima, Kazunori Waki, Hiroyuki Nakahara, Takao K. Hensch, and Piero Carninci PMCID: PMC2507754 Does High C-reactive Protein Concentration Increase Atherosclerosis? The Whitehall II Study Mika Kivimäki, Debbie A. Lawlor, George Davey Smith, Meena Kumari, Ann Donald, Annie Britton, Juan P. Casas, Tina Shah, Eric Brunner, Nicholas J. Timpson, Julian P. J. Halcox, Michelle A. Miller, Steve E. Humphries, John Deanfield, Michael G. Marmot, and Aroon D. Hingorani PMCID: PMC2507732 Owls May Use Faeces and Prey Feathers to Signal Current Reproduction Vincenzo Penteriani and Maria del Mar Delgado PMCID: PMC2507733 Small Scattered Fragments Do Not a Dwarf Make: Biological and Archaeological Data Indicate that Prehistoric Inhabitants of Palau Were Normal Sized Scott M. Fitzpatrick, Greg C. Nelson, and Geoffrey Clark PMCID: PMC2516174 Distilling Artificial Recombinants from Large Sets of Complete mtDNA Genomes Qing-Peng Kong, Antonio Salas, Chang Sun, Noriyuki Fuku, Masashi Tanaka, Li Zhong, Cheng-Ye Wang, Yong-Gang Yao, and Hans-Jürgen Bandelt PMCID: PMC2515346 Atypical BSE (BASE) Transmitted from Asymptomatic Aging Cattle to a Primate Emmanuel E. Comoy, Cristina Casalone, Nathalie Lescoutra-Etchegaray, Gianluigi Zanusso, Sophie Freire, Dominique Marcé, Frédéric Auvré, Marie-Magdeleine Ruchoux, Sergio Ferrari, Salvatore Monaco, Nicole Salès, Maria Caramelli, Philippe Leboulch, Paul Brown, Corinne I. Lasmézas, and Jean-Philippe Deslys PMCID: PMC2515088 Genomic Diversity within the Enterobacter cloacae Complex Armand Paauw, Martien P. M. Caspers, Frank H. J. Schuren, Maurine A. Leverstein-van Hall, Alexis Delétoile, Roy C. Montijn, Jan Verhoef, and Ad C. Fluit PMCID: PMC2515634 Novel Meta-Analysis-Derived Type 2 Diabetes Risk Loci Do Not Determine Prediabetic Phenotypes Harald Staiger, Fausto Machicao, Konstantinos Kantartzis, Silke A. Schäfer, Kerstin Kirchhoff, Martina Guthoff, Günther Silbernagel, Norbert Stefan, Andreas Fritsche, and Hans-Ulrich Häring PMCID: PMC2500187 Rapid Reversal of Chondroitin Sulfate Proteoglycan Associated Staining in Subcompartments of Mouse Neostriatum during the Emergence of Behaviour Hyunchul Lee, Catherine A. Leamey, and Atomu Sawatari PMCID: PMC2500190 A Dominant X-Linked QTL Regulating Pubertal Timing in Mice Found by Whole Genome Scanning and Modified Interval-Specific Congenic Strain Analysis Wangsheng Zhu, Zhongpeng Fan, Chao Zhang, Zhengxia Guo, Ying Zhao, Yuxun Zhou, Kai Li, Zhenghong Xing, Guoqiang Chen, Yinming Liang, Li Jin, and Junhua Xiao PMCID: PMC2516528 Culture Shapes How We Look at Faces Caroline Blais, Rachael E. Jack, Christoph Scheepers, Daniel Fiset, and Roberto Caldara PMCID: PMC2515341 Neutralization of Botulinum Neurotoxin by a Human Monoclonal Antibody Specific for the Catalytic Light Chain Sharad P. Adekar, Tsuyoshi Takahashi, R. Mark Jones, Fetweh H. Al-Saleem, Denise M. Ancharski, Michael J. Root, B. P. Kapadnis, Lance L. Simpson, and Scott K. Dessain PMCID: PMC2515629 Transcriptome-Wide Assessment of Human Brain and Lymphocyte Senescence Mun-Gwan Hong, Amanda J. Myers, Patrik K. E. Magnusson, and Jonathan A. Prince PMCID: PMC2515343 Administration of M. leprae Hsp65 Interferes with the Murine Lupus Progression Eliana B. Marengo, Luciana V. de Moraes, Marcella Faria, Beatriz L. Fernandes, Luciana V. Carvalho, Denise V. Tambourgi, Luiz V. Rizzo, Fernanda C. V. Portaro, Antônio Carlos M. Camargo, and Osvaldo A. Sant'Anna PMCID: PMC2515089 Genome Sequence of a Lancefield Group C Streptococcus zooepidemicus Strain Causing Epidemic Nephritis: New Information about an Old Disease Stephen B. Beres, Ricardo Sesso, Sergio Wyton L. Pinto, Nancy P. Hoe, Stephen F. Porcella, Frank R. DeLeo, and James M. Musser PMCID: PMC2516327 The Neural Correlates of Desire Hideaki Kawabata and Semir Zeki PMCID: PMC2518616 Seeing without Seeing? Degraded Conscious Vision in a Blindsight Patient Morten Overgaard, Katrin Fehl, Kim Mouridsen, Bo Bergholt, and Axel Cleeremans PMCID: PMC2507770 GABAA Receptor-Mediated Acceleration of Aging-Associated Memory Decline in APP/PS1 Mice and Its Pharmacological Treatment by Picrotoxin Yuji Yoshiike, Tetsuya Kimura, Shunji Yamashita, Hiroyuki Furudate, Tatsuya Mizoroki, Miyuki Murayama, and Akihiko Takashima PMCID: PMC2515633 JunB Inhibits ER Stress and Apoptosis in Pancreatic Beta Cells Esteban N. Gurzov, Fernanda Ortis, Latifa Bakiri, Erwin F. Wagner, and Decio L. Eizirik PMCID: PMC2516602 HYAL1 and HYAL2 Inhibit Tumour Growth In Vivo but Not In Vitro Fuli Wang, Elvira V. Grigorieva, Jingfeng Li, Vera N. Senchenko, Tatiana V. Pavlova, Ekaterina A. Anedchenko, Anna V. Kudryavtseva, Alexander Tsimanis, Debora Angeloni, Michael I. Lerman, Vladimir I. Kashuba, George Klein, and Eugene R. Zabarovsky PMCID: PMC2516603 Regenerating Articular Tissue by Converging Technologies Lorenzo Moroni, Doreen Hamann, Luca Paoluzzi, Jeroen Pieper, Joost R. de Wijn, and Clemens A. van Blitterswijk PMCID: PMC2515637 Activation-Induced Cytidine Deaminase Deficiency Causes Organ-Specific Autoimmune Disease Koji Hase, Daisuke Takahashi, Masashi Ebisawa, Sayaka Kawano, Kikuji Itoh, and Hiroshi Ohno PMCID: PMC2515643 The Histone H3 Lysine 27-Specific Demethylase Jmjd3 Is Required for Neural Commitment Thomas Burgold, Fabio Spreafico, Francesca De Santa, Maria Grazia Totaro, Elena Prosperini, Gioacchino Natoli, and Giuseppe Testa PMCID: PMC2515638 Pathology of Puumala Hantavirus Infection in Macaques Tarja Sironen, Jonas Klingström, Antti Vaheri, Leif C. Andersson, Åke Lundkvist, and Alexander Plyusnin PMCID: PMC2516326 Elusive Origins of the Extra Genes in Aspergillus oryzae Nora Khaldi and Kenneth H. Wolfe PMCID: PMC2515630 Induction of Blood Brain Barrier Tight Junction Protein Alterations by CD8 T Cells Georgette L. Suidan, Jeremiah R. Mcdole, Yi Chen, Istvan Pirko, and Aaron J. Johnson PMCID: PMC2516328 Dynamical Systems Analysis of Mitochondrial BAK Activation Kinetics Predicts Resistance to BH3 Domains Claire Grills, Nyree Crawford, Alex Chacko, Patrick G. Johnston, Francesca O'Rourke, and Dean A. Fennell PMCID: PMC2516175 Climate Warming, Marine Protected Areas and the Ocean-Scale Integrity of Coral Reef Ecosystems Nicholas A. J. Graham, Tim R. McClanahan, M. Aaron MacNeil, Shaun K. Wilson, Nicholas V. C. Polunin, Simon Jennings, Pascale Chabanet, Susan Clark, Mark D. Spalding, Yves Letourneur, Lionel Bigot, René Galzin, Marcus C. Öhman, Kajsa C. Garpe, Alasdair J. Edwards, and Charles R. C. Sheppard PMCID: PMC2516599 Progesterone from the Cumulus Cells Is the Sperm Chemoattractant Secreted by the Rabbit Oocyte Cumulus Complex Héctor Alejandro Guidobaldi, María Eugenia Teves, Diego Rafael Uñates, Agustín Anastasía, and Laura Cecilia Giojalas PMCID: PMC2515641 A Potential Role for Drosophila Mucins in Development and Physiology Zulfeqhar A. Syed, Torleif Härd, Anne Uv, and Iris F. van Dijk-Härd PMCID: PMC2515642 Detection of Large Numbers of Novel Sequences in the Metatranscriptomes of Complex Marine Microbial Communities Jack A. Gilbert, Dawn Field, Ying Huang, Rob Edwards, Weizhong Li, Paul Gilna, and Ian Joint PMCID: PMC2518522 Virulence in Murine Model Shows the Existence of Two Distinct Populations of Brazilian Vaccinia virus Strains Jaqueline Maria Siqueira Ferreira, Betânia Paiva Drumond, Maria Isabel Maldonado Coelho Guedes, Marcelo Antônio Pascoal-Xavier, Camila Megale Almeida-Leite, Rosa Maria Esteves Arantes, Bruno Eduardo Fernandes Mota, Jônatas Santos Abrahão, Pedro Augusto Alves, Fernando Meireles Oliveira, Paulo César Peregrino Ferreira, Cláudio Antônio Bonjardim, Zélia Inês Portela Lobato, and Erna Geessien Kroon PMCID: PMC2518622 Prefrontal Norepinephrine Determines Attribution of “High” Motivational Salience Rossella Ventura, Emanuele Claudio Latagliata, Cristina Morrone, Immacolata La Mela, and Stefano Puglisi-Allegra PMCID: PMC2516177 Reverse and Conventional Chemical Ecology Approaches for the Development of Oviposition Attractants for Culex Mosquitoes Walter S. Leal, Rosângela M. R. Barbosa, Wei Xu, Yuko Ishida, Zainulabeuddin Syed, Nicolas Latte, Angela M. Chen, Tania I. Morgan, Anthony J. Cornel, and André Furtado PMCID: PMC2516325 Rapid and Reversible Recruitment of Early Visual Cortex for Touch Lotfi B. Merabet, Roy Hamilton, Gottfried Schlaug, Jascha D. Swisher, Elaine T. Kiriakopoulos, Naomi B. Pitskel, Thomas Kauffman, and Alvaro Pascual-Leone PMCID: PMC2516172 Evaluation of Two Methods to Estimate and Monitor Bird Populations Sandra L. Taylor and Katherine S. Pollard PMCID: PMC2516598 Neuropeptide Receptor Transcriptome Reveals Unidentified Neuroendocrine Pathways Naoki Yamanaka, Sachie Yamamoto, Dušan Žitňan, Ken Watanabe, Tsuyoshi Kawada, Honoo Satake, Yu Kaneko, Kiyoshi Hiruma, Yoshiaki Tanaka, Tetsuro Shinoda, and Hiroshi Kataoka PMCID: PMC2516173 Quantifying Data Quality for Clinical Trials Using Electronic Data Capture Meredith L. Nahm, Carl F. Pieper, and Maureen M. Cunningham PMCID: PMC2516178 Brabykinin B1 Receptor Antagonism Is Beneficial in Renal Ischemia-Reperfusion Injury Pamella H. M. Wang, Gabriela Campanholle, Marcos A. Cenedeze, Carla Q. Feitoza, Giselle M. Gonçalves, Richardt G. Landgraf, Sonia Jancar, João B. Pesquero, Alvaro Pacheco-Silva, and Niels O. S. Câmara PMCID: PMC2516176 Risk Factors for Congenital Cryptorchidism in a Prospective Birth Cohort Study Ida N. Damgaard, Tina K. Jensen, The Nordic Cryptorchidism Study Group, Jørgen H. Petersen, Niels E. Skakkebæk, Jorma Toppari, and Katharina M. Main PMCID: PMC2516600 Bioactive Endophytes Warrant Intensified Exploration and Conservation Stephen A. Smith, David C. Tank, Lori-Ann Boulanger, Carol A. Bascom-Slack, Kaury Eisenman, David Kingery, Beatrice Babbs, Kathleen Fenn, Joshua S. Greene, Bradley D. Hann, Jocelyn Keehner, Elizabeth G. Kelley-Swift, Vivek Kembaiyan, Sun Jin Lee, Puyao Li, David Y. Light, Emily H. Lin, Cong Ma, Emily Moore, Michelle A. Schorn, Daniel Vekhter, Percy V. Nunez, Gary A. Strobel, Michael J. Donoghue, and Scott A. Strobel PMCID: PMC2518837 Tyrosine Phosphorylation of the UDP-Glucose Dehydrogenase of Escherichia coli Is at the Crossroads of Colanic Acid Synthesis and Polymyxin Resistance Soline Lacour, Emmanuelle Bechet, Alain J. Cozzone, Ivan Mijakovic, and Christophe Grangeasse PMCID: PMC2516531 The Actin-Binding Protein Capulet Genetically Interacts with the Microtubule Motor Kinesin to Maintain Neuronal Dendrite Homeostasis Paul M. B. Medina, Ryan J. Worthen, Lawrence J. Forsberg, and Jay E. Brenman PMCID: PMC2516187 Individual Differences in the Amount and Timing of Salivary Melatonin Secretion Helen J. Burgess and Louis F. Fogg PMCID: PMC2516604 Microbial Prevalence, Diversity and Abundance in Amniotic Fluid During Preterm Labor: A Molecular and Culture-Based Investigation Daniel B. DiGiulio, Roberto Romero, Harold P. Amogan, Juan Pedro Kusanovic, Elisabeth M. Bik, Francesca Gotsch, Chong Jai Kim, Offer Erez, Sam Edwin, and David A. Relman PMCID: PMC2516597 Random Drift versus Selection in Academic Vocabulary: An Evolutionary Analysis of Published Keywords R. Alexander Bentley PMCID: PMC2518107 Genetic Variability of Hepatitis C Virus before and after Combined Therapy of Interferon plus Ribavirin José Manuel Cuevas, Manuela Torres-Puente, Nuria Jiménez-Hernández, María Alma Bracho, Inmaculada García-Robles, Boris Wrobel, Fernando Carnicer, Juan del Olmo, Enrique Ortega, Andrés Moya, and Fernando González-Candelas PMCID: PMC2518109 Cre-Dependent Expression of Multiple Transgenes in Isolated Neurons of the Adult Forebrain Sridhara Chakravarthy, Tara Keck, Martijn Roelandse, Robin Hartman, Andreas Jeromin, Sean Perry, Sonja B. Hofer, Thomas Mrsic-Flogel, and Christiaan N. Levelt PMCID: PMC2518110 Estimating Receptive Fields from Responses to Natural Stimuli with Asymmetric Intensity Distributions Nicholas A. Lesica, Toshiyuki Ishii, Garrett B. Stanley, and Toshihiko Hosoya PMCID: PMC2518112 Transgene-Induced Gene Silencing Is Not Affected by a Change in Ploidy Level Daniela Pignatta, Brian Dilkes, Tadeusz Wroblewski, Richard W. Michelmore, and Luca Comai PMCID: PMC2516530 CHEK2 Mutations Affecting Kinase Activity Together With Mutations in TP53 Indicate a Functional Pathway Associated with Resistance to Epirubicin in Primary Breast Cancer Ranjan Chrisanthar, Stian Knappskog, Erik Løkkevik, Gun Anker, Bjørn Østenstad, Steinar Lundgren, Elisabet O. Berge, Terje Risberg, Ingvil Mjaaland, Lovise Mæhle, Lars Fredrik Engebretsen, Johan Richard Lillehaug, and Per Eystein Lønning PMCID: PMC2518116 The Critical Role of Partially Exposed N-Terminal Valine Residue in Stabilizing GH10 Xylanase from Bacillus sp.NG-27 under Poly-Extreme Conditions Amit Bharadwaj, Sadhu Leelavathi, Sudeshna Mazumdar-Leighton, Amit Ghosh, Suryanarayanarao Ramakumar, and Vanga S. Reddy PMCID: PMC2516601 Predominant Role of Host Genetics in Controlling the Composition of Gut Microbiota Zaruhi A. Khachatryan, Zhanna A. Ktsoyan, Gayane P. Manukyan, Denise Kelly, Karine A. Ghazaryan, and Rustam I. Aminov PMCID: PMC2516932 Breast Tumor Cells with PI3K Mutation or HER2 Amplification Are Selectively Addicted to Akt Signaling Qing-Bai She, Sarat Chandarlapaty, Qing Ye, Jose Lobo, Kathleen M. Haskell, Karen R. Leander, Deborah DeFeo-Jones, Hans E. Huber, and Neal Rosen PMCID: PMC2516933 Seroprevalence and Risk Factors of Chikungunya Virus Infection in Mayotte, Indian Ocean, 2005-2006: A Population-Based Survey Daouda Sissoko, Amrat Moendandze, Denis Malvy, Claude Giry, Khaled Ezzedine, Jean Louis Solet, and Vincent Pierre PMCID: PMC2518850 Unusual Repertoire of Vocalizations in the BTBR T+tf/J Mouse Model of Autism Maria Luisa Scattoni, Shruti U. Gandhy, Laura Ricceri, and Jacqueline N. Crawley PMCID: PMC2516927 Synthetic Activation of Endogenous PI3K and Rac Identifies an AND-Gate Switch for Cell Polarization and Migration Takanari Inoue and Tobias Meyer PMCID: PMC2518103 Muscles in “Concert”: Study of Primary Motor Cortex Upper Limb Functional Topography Jean-Marc Melgari, Patrizio Pasqualetti, Flavia Pauri, and Paolo Maria Rossini PMCID: PMC2518106 Adenine Nucleotide Translocator Transports Haem Precursors into Mitochondria Motoki Azuma, Yasuaki Kabe, Chikanori Kuramori, Masao Kondo, Yuki Yamaguchi, and Hiroshi Handa PMCID: PMC2516936 Choice of Cell-Delivery Route for Skeletal Myoblast Transplantation for Treating Post-Infarction Chronic Heart Failure in Rat Satsuki Fukushima, Steven R. Coppen, Joon Lee, Kenichi Yamahara, Leanne E. Felkin, Cesare M. N. Terracciano, Paul J. R. Barton, Magdi H. Yacoub, and Ken Suzuki PMCID: PMC2516937 Overexpression of Partner of Numb Induces Asymmetric Distribution of the PI4P 5-Kinase Skittles in Mitotic Sensory Organ Precursor Cells in Drosophila Carolina N. L. R. Perdigoto, Louis Gervais, Erin Overstreet, Janice Fischer, Antoine Guichet, and François Schweisguth PMCID: PMC2516928 Bi-Directional Sexual Dimorphisms of the Song Control Nucleus HVC in a Songbird with Unison Song Manfred Gahr, Reinhold Metzdorf, Dieter Schmidl, and Wolfgang Wickler PMCID: PMC2518117 Horizontal Gene Transfers Link a Human MRSA Pathogen to Contagious Bovine Mastitis Bacteria Thomas Brody, Amarendra S. Yavatkar, Yong Lin, Jermaine Ross, Alexander Kuzin, Mukta Kundu, Yang Fann, and Ward F. Odenwald PMCID: PMC2518619 Gender Differences in the Risk of HIV Infection among Persons Reporting Abstinence, Monogamy, and Multiple Sexual Partners in Northern Tanzania Keren Z. Landman, Jan Ostermann, John A. Crump, Anna Mgonja, Meghan K. Mayhood, Dafrosa K. Itemba, Alison C. Tribble, Evaline M. Ndosi, Helen Y. Chu, John F. Shao, John A. Bartlett, and Nathan M. Thielman PMCID: PMC2516930 Genetic Architecture of Hybrid Male Sterility in Drosophila: Analysis of Intraspecies Variation for Interspecies Isolation Laura K. Reed, Brooke A. LaFlamme, and Therese A. Markow PMCID: PMC2517651 Drug-Selected Human Lung Cancer Stem Cells: Cytokine Network, Tumorigenic and Metastatic Properties Vera Levina, Adele M. Marrangoni, Richard DeMarco, Elieser Gorelik, and Anna E. Lokshin PMCID: PMC2518121 FGF2 Translationally Induced by Hypoxia Is Involved in Negative and Positive Feedback Loops with HIF-1α Caroline Conte, Elodie Riant, Céline Toutain, Françoise Pujol, Jean-François Arnal, Françoise Lenfant, and Anne-Catherine Prats PMCID: PMC2518102 Entropy Bounds for Hierarchical Molecular Networks Matthias Dehmer, Stephan Borgert, and Frank Emmert-Streib PMCID: PMC2518648 Effects of Sample Size on Estimates of Population Growth Rates Calculated with Matrix Models Ian J. Fiske, Emilio M. Bruna, and Benjamin M. Bolker PMCID: PMC2518208 Systematic Review of the Empirical Evidence of Study Publication Bias and Outcome Reporting Bias Kerry Dwan, Douglas G. Altman, Juan A. Arnaiz, Jill Bloom, An-Wen Chan, Eugenia Cronin, Evelyne Decullier, Philippa J. Easterbrook, Erik Von Elm, Carrol Gamble, Davina Ghersi, John P. A. Ioannidis, John Simes, and Paula R. Williamson PMCID: PMC2518111 Observing Virtual Arms that You Imagine Are Yours Increases the Galvanic Skin Response to an Unexpected Threat Karin Hägni, Kynan Eng, Marie-Claude Hepp-Reymond, Lisa Holper, Birgit Keisker, Ewa Siekierka, and Daniel C. Kiper PMCID: PMC2517650 Targeted Chromosomal Insertion of Large DNA into the Human Genome by a Fiber-Modified High-Capacity Adenovirus-Based Vector System Manuel A. F. V. Gonçalves, Maarten Holkers, Gijsbert P. van Nierop, Roeland Wieringa, Maria G. Pau, and Antoine A. F. de Vries PMCID: PMC2518115 Formation of the Food Vacuole in Plasmodium falciparum: A Potential Role for the 19 kDa Fragment of Merozoite Surface Protein 1 (MSP119) Anton R. Dluzewski, Irene T. Ling, John M. Hopkins, Munira Grainger, Gabriele Margos, Graham H. Mitchell, Anthony A. Holder, and Lawrence H. Bannister PMCID: PMC2518119 Stochasticity and the Molecular Mechanisms of Induced Pluripotency Ben D. MacArthur, Colin P. Please, and Richard O. C. Oreffo PMCID: PMC2517845 Effect of the Frequency of Self-Monitoring Blood Glucose in Patients with Type 2 Diabetes Treated with Oral Antidiabetic Drugs—A Multi-Centre, Randomized Controlled Trial Werner A. Scherbaum, Christian Ohmann, Heinz-Harald Abholz, Nico Dragano, and Mark Lankisch PMCID: PMC2518209 Integrated Genomics Identifies Five Medulloblastoma Subtypes with Distinct Genetic Profiles, Pathway Signatures and Clinicopathological Features Marcel Kool, Jan Koster, Jens Bunt, Nancy E. Hasselt, Arjan Lakeman, Peter van Sluis, Dirk Troost, Netteke Schouten-van Meeteren, Huib N. Caron, Jacqueline Cloos, Alan Mršić, Bauke Ylstra, Wieslawa Grajkowska, Wolfgang Hartmann, Torsten Pietsch, David Ellison, Steven C. Clifford, and Rogier Versteeg PMCID: PMC2518524 Directly Observed Therapy and Improved Tuberculosis Treatment Outcomes in Thailand Amornrat Anuwatnonthakate, Pranom Limsomboon, Sriprapa Nateniyom, Wanpen Wattanaamornkiat, Sittijate Komsakorn, Saiyud Moolphate, Navarat Chiengsorn, Samroui Kaewsa-ard, Potjaman Sombat, Umaporn Siangphoe, Philip A. Mock, and Jay K. Varma PMCID: PMC2518105 Duplication and Diversification of the Hypoxia-Inducible IGFBP-1 Gene in Zebrafish Hiroyasu Kamei, Ling Lu, Shuang Jiao, Yun Li, Claus Gyrup, Lisbeth S. Laursen, Claus Oxvig, Jianfeng Zhou, and Cunming Duan PMCID: PMC2518108 Distributed Dendritic Processing Facilitates Object Detection: A Computational Analysis on the Visual System of the Fly Patrick Hennig, Ralf Möller, and Martin Egelhaaf PMCID: PMC2517649 Longer First Introns Are a General Property of Eukaryotic Gene Structure Keith R. Bradnam and Ian Korf PMCID: PMC2518113 A Translation Initiation Element Specific to mRNAs with Very Short 5′UTR that Also Regulates Transcription Rofa Elfakess and Rivka Dikstein PMCID: PMC2518114 Computational Modelling of Genome-Side Transcription Assembly Networks Using a Fluidics Analogy Yousry Y. Azmy, Anshuman Gupta, and B. Franklin Pugh PMCID: PMC2518210 Beneficial Effect of TRAIL on HIV Burden, without Detectable Immune Consequences Brett D. Shepard, Davide De Forni, David R. McNamara, Andrea Foli, Stacey A. Rizza, Roshini S. Abraham, Keith Knutson, Peter J. Wettstein, Franco Lori, and Andrew D. Badley PMCID: PMC2517653 Trogocytosis of MHC-I/Peptide Complexes Derived from Tumors and Infected Cells Enhances Dendritic Cell Cross-Priming and Promotes Adaptive T Cell Responses Qian-Jin Zhang, Xiao-Lin Li, David Wang, Xiao-Cong Huang, J. Michael Mathis, Wei-Ming Duan, David Knight, Runhua Shi, Jonathan Glass, Dong-Qing Zhang, Lea Eisenbach, and Wilfred A. Jefferies PMCID: PMC2518214 Leptin Replacement Improves Cognitive Development Gilberto J. Paz-Filho, Talin Babikian, Robert Asarnow, Karin Esposito, Halil K. Erol, Ma-Li Wong, and Julio Licinio PMCID: PMC2518120 Binomial Mitotic Segregation of MYCN-Carrying Double Minutes in Neuroblastoma Illustrates the Role of Randomness in Oncogene Amplification Gisela Lundberg, Anders H. Rosengren, Ulf Håkanson, Henrik Stewénius, Yuesheng Jin, Ylva Stewénius, Sven Påhlman, and David Gisselsson PMCID: PMC2518122 Global Self-Organization of the Cellular Metabolic Structure Ildefonso M. De La Fuente, Luis Martínez, Alberto L. Pérez-Samartín, Leire Ormaetxea, Cristian Amezaga, and Antonio Vera-López PMCID: PMC2519785 Airway and Esophageal Stenting in Patients with Advanced Esophageal Cancer and Pulmonary Involvement Fabrice Paganin, Laurent Schouler, Laurent Cuissard, Jean Baptiste Noel, Jean-Philippe Becquart, Mathieu Besnard, Laurent Verdier, Denis Rousseau, Claude Arvin-Berod, and Arnaud Bourdin PMCID: PMC2518104 Small Deletion Variants Have Stable Breakpoints Commonly Associated with Alu Elements Adam J. de Smith, Robin G. Walters, Lachlan J. M. Coin, Israel Steinfeld, Zohar Yakhini, Rob Sladek, Philippe Froguel, and Alexandra I. F. Blakemore PMCID: PMC2518860 Systems Biology of the Clock in Neurospora crassa Wubei Dong, Xiaojia Tang, Yihai Yu, Roger Nilsen, Rosemary Kim, James Griffith, Jonathan Arnold, and H.-Bernd Schüttler PMCID: PMC2518617 Computational Identification of Four Spliceosomal snRNAs from the Deep-Branching Eukaryote Giardia intestinalis Xiaowei Sylvia Chen, W. Timothy J. White, Lesley J. Collins, and David Penny PMCID: PMC2518118 Corrections Correction: A Unique Carrier for Delivery of Therapeutic Compounds beyond the Blood-Brain Barrier Delara Karkan, Cheryl Pfeifer, Timothy Z. Vitalis, Gavin Arthur, Maki Ujiie, Qingqi Chen, Sam Tsai, Gerrasimo Koliatis, Reinhard Gabathuler, and Wilfred A. Jefferies PMCID: PMC2645285 Corrects: Delara Karkan, et al. A Unique Carrier for Delivery of Therapeutic Compounds beyond the Blood-Brain Barrier. PLoS ONE. 2008; 3(6): e2469. Correction: A Randomized Controlled Phase IIb Trial of Antigen-Antibody Immunogenic Complex Therapeutic Vaccine in Chronic Hepatitis B Patients Dao-Zhen Xu, Kai Zhao, Li-Min Guo, Lan-Juan Li, Qin Xie, Hong Ren, Ji-Ming Zhang, Min Xu, Hui-Fen Wang, Wen-Xiang Huang, Xue-Fan Bai, Jun-Qi Niu, Pei Liu, Xin-Yue Chen, Xin-Liang Shen, Zheng-Hong Yuan, Xuan-Yi Wang, and Yu-Mei Wen PMCID: PMC2651656 Corrects: Dao-Zhen Xu, et al. A Randomized Controlled Phase IIb Trial of Antigen-Antibody Immunogenic Complex Therapeutic Vaccine in Chronic Hepatitis B Patients. PLoS ONE. 2008; 3(7): e2565. Correction: Capillary Regeneration in Scleroderma: Stem Cell Therapy Reverses Phenotype? Jo N. Fleming, Richard A. Nash, D. O. McLeod, David F. Fiorentino, Howard M. Shulman, M. Kari Connolly, Jerry A. Molitor, Gretchen Henstorf, Robert Lafyatis, David K. Pritchard, Lawrence D. Adams, Daniel E. Furst, and Stephen M. Schwartz PMCID: PMC2645286 Corrects: Jo N. Fleming, et al. Capillary Regeneration in Scleroderma: Stem Cell Therapy Reverses Phenotype? PLoS ONE. 2008; 3(1): e1452. Correction: Vaccination Targeting a Surface Sialidase of P. acnes: Implication for New Treatment of Acne Vulgaris Teruaki Nakatsuji, Yu-Tsueng Liu, Cheng-Po Huang, Christos C. Zouboulis, Richard L. Gallo, and Chun-Ming Huang PMCID: PMC2651660 Corrects: Teruaki Nakatsuji, et al. Vaccination Targeting a Surface Sialidase of P. acnes: Implication for New Treatment of Acne Vulgaris. PLoS ONE. 2008; 3(2): e1551. Correction: A Randomized Controlled Phase IIb Trial of Antigen-Antibody Immunogenic Complex Therapeutic Vaccine in Chronic Hepatitis B Patients Dao-Zhen Xu, Kai Zhao, Li-Min Guo, Lan-Juan Li, Qin Xie, Hong Ren, Ji-Ming Zhang, Min Xu, Hui-Fen Wang, Wen-Xiang Huang, Xue-Fan Bai, Jun-Qi Niu, Pei Liu, Xin-Yue Chen, Xin-Liang Shen, Zheng-Hong Yuan, Xuan-Yi Wang, and Yu-Mei Wen PMCID: PMC2651657 Corrects: Dao-Zhen Xu, et al. A Randomized Controlled Phase IIb Trial of Antigen-Antibody Immunogenic Complex Therapeutic Vaccine in Chronic Hepatitis B Patients. PLoS ONE. 2008; 3(7): e2565. Correction: Dopamine Inhibits Mitochondrial Motility in Hippocampal Neurons Sigeng Chen, Geoffrey C. Owens, and David B. Edelman PMCID: PMC2655755 Corrects: Sigeng Chen, et al. Dopamine Inhibits Mitochondrial Motility in Hippocampal Neurons. PLoS ONE. 2008; 3(7): e2804. Correction: Colorectal Cancer Stem Cells Are Enriched in Xenogeneic Tumors Following Chemotherapy Scott J. Dylla, Lucia Beviglia, In-Kyung Park, Cecile Chartier, Janak Raval, Lucy Ngan, Kellie Pickell, Jorge Aguilar, Sasha Lazetic, Stephanie Smith-Berdan, Michael F. Clarke, Tim Hoey, John Lewicki, and Austin L. Gurney PMCID: PMC2556496 Corrects: Scott J. Dylla, et al. Colorectal Cancer Stem Cells Are Enriched in Xenogeneic Tumors Following Chemotherapy. PLoS ONE. 2008; 3(6): e2428. Correction: A Common Genomic Framework for a Diverse Assembly of Plasmids in the Symbiotic Nitrogen Fixing Bacteria Lisa C. Crossman, Santiago Castillo-Ramírez, Craig McAnnula, Luis Lozano, Georgios S. Vernikos, José L. Acosta, Zara F. Ghazoui, Ismael Hernández-González, Georgina Meakin, Alan W. Walker, Michael F. Hynes, J. Peter W. Young, J. Allan Downie, David Romero, Andrew W. B. Johnston, Guillermo Dávila, Julian Parkhill, and Víctor González PMCID: PMC2655753 Corrects: Lisa C. Crossman, et al. A Common Genomic Framework for a Diverse Assembly of Plasmids in the Symbiotic Nitrogen Fixing Bacteria. PLoS ONE. 2008; 3(7): e2567. Correction: Pathogenesis of Age-Related Osteoporosis: Impaired Mechano-Responsiveness of Bone Is Not the Culprit Olli V. Leppänen, Harri Sievänen, Jarkko Jokihaara, Ilari Pajamäki, Pekka Kannus, and Teppo L. N. Järvinen PMCID: PMC2655758 Corrects: Olli V. Leppänen, et al. Pathogenesis of Age-Related Osteoporosis: Impaired Mechano-Responsiveness of Bone Is Not the Culprit. PLoS ONE. 2008; 3(7): e2540. Correction: Pathogenesis of Age-Related Osteoporosis: Impaired Mechano-Responsiveness of Bone Is Not the Culprit Olli V. Leppänen, Harri Sievänen, Jarkko Jokihaara, Ilari Pajamäki, Pekka Kannus, and Teppo L. N. Järvinen PMCID: PMC2655757 Corrects: Olli V. Leppänen, et al. Pathogenesis of Age-Related Osteoporosis: Impaired Mechano-Responsiveness of Bone Is Not the Culprit. PLoS ONE. 2008; 3(7): e2540. Correction: A Common Genomic Framework for a Diverse Assembly of Plasmids in the Symbiotic Nitrogen Fixing Bacteria Lisa C. Crossman, Santiago Castillo-Ramírez, Craig McAnnula, Luis Lozano, Georgios S. Vernikos, José L. Acosta, Zara F. Ghazoui, Ismael Hernández-González, Georgina Meakin, Alan W. Walker, Michael F. Hynes, J. Peter W. Young, J. Allan Downie, David Romero, Andrew W. B. Johnston, Guillermo Dávila, Julian Parkhill, and Víctor González PMCID: PMC2655756 Corrects: Lisa C. Crossman, et al. A Common Genomic Framework for a Diverse Assembly of Plasmids in the Symbiotic Nitrogen Fixing Bacteria. PLoS ONE. 2008; 3(7): e2567. Correction: Vaccination Targeting a Surface Sialidase of P. acnes: Implication for New Treatment of Acne Vulgaris Teruaki Nakatsuji, Yu-Tsueng Liu, Cheng-Po Huang, Christos C. Zouboulis, Richard L. Gallo, and Chun-Ming Huang PMCID: PMC2651659 Corrects: Teruaki Nakatsuji, et al. Vaccination Targeting a Surface Sialidase of P. acnes: Implication for New Treatment of Acne Vulgaris. PLoS ONE. 2008; 3(2): e1551. Correction: PINK1 Is Necessary for Long Term Survival and Mitochondrial Function in Human Dopaminergic Neurons Alison Wood-Kaczmar, Sonia Gandhi, Zhi Yao, Andrey Y. Abramov, Erik A. Miljan, Gregory Keen, Lee Stanyer, Iain Hargreaves, Kristina Klupsch, Emma Deas, Julian Downward, Louise Mansfield, Parmjit Jat, Joanne Taylor, Simon Heales, Michael R. Duchen, David Latchman, Sarah J. Tabrizi, and Nicholas W. Wood PMCID: PMC2655759 Corrects: Alison Wood-Kaczmar, et al. PINK1 Is Necessary for Long Term Survival and Mitochondrial Function in Human Dopaminergic Neurons. PLoS ONE. 2008; 3(6): e2455. Correction: Dopamine Inhibits Mitochondrial Motility in Hippocampal Neurons Sigeng Chen, Geoffrey C. Owens, and David B. Edelman PMCID: PMC2655754 Corrects: Sigeng Chen, et al. Dopamine Inhibits Mitochondrial Motility in Hippocampal Neurons. PLoS ONE. 2008; 3(7): e2804. |
