Breast and Prostate Cancer and Hormone-Related Gene Variant Study

Resources for Investigators

All of the sequencing and genotyping data generated in BPC3 are publicly available at the USC/Norris Comprehensive Cancer Center web site. These include:

1. sequencing data used to select tag SNPs in 75 candidate genes in the sex steroid hormone and IGF-1 growth factor pathways;
2. selection of haplotype tagging SNPs for these genes;
3. Haploview plots showing the linkage disequilibrium across each locus; and
4. output from Tagger with the tagging SNPs chosen.

Information is also provided on the primers and probes for each TaqMan assay, and sample Taqman scatterplots from each genotyping center.