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Volume 9;  2008
Research Articles
Association of SAP130/SF3b-3 with Cullin-RING ubiquitin ligase complexes and its regulation by the COP9 signalosome
Suchithra Menon, Tomohiko Tsuge, Naoshi Dohmae, Koji Takio, and Ning Wei
BMC Biochem. 2008; 9: 1. Published online 2008 January 3. doi: 10.1186/1471-2091-9-1.
PMCID: PMC2265268
The effects of the surface-exposed residues on the binding and hydrolytic activities of Vibrio carchariae chitinase A
Supansa Pantoom, Chomphunuch Songsiriritthigul, and Wipa Suginta
BMC Biochem. 2008; 9: 2. Published online 2008 January 21. doi: 10.1186/1471-2091-9-2.
PMCID: PMC2265269
Blocking binding of Bacillus thuringiensis Cry1Aa to Bombyx mori cadherin receptor results in only a minor reduction of toxicity
Taek H You, Mi K Lee, Jeremy L Jenkins, Oscar Alzate, and Donald H Dean
BMC Biochem. 2008; 9: 3. Published online 2008 January 24. doi: 10.1186/1471-2091-9-3.
PMCID: PMC2245940
Components of the ubiquitin-proteasome pathway compete for surfaces on Rad23 family proteins
Amanda M Goh, Kylie J Walters, Suzanne Elsasser, Rati Verma, Raymond J Deshaies, Daniel Finley, and Peter M Howley
BMC Biochem. 2008; 9: 4. Published online 2008 January 30. doi: 10.1186/1471-2091-9-4.
PMCID: PMC2267792
Thermal dependency of RAG1 self-association properties
Pallabi De, Shuying Zhao, Lori M Gwyn, LeAnn J Godderz, Mandy M Peak, and Karla K Rodgers
BMC Biochem. 2008; 9: 5. Published online 2008 January 30. doi: 10.1186/1471-2091-9-5.
PMCID: PMC2270275
Functional role of the additional domains in inulosucrase (IslA) from Leuconostoc citreum CW28
Sandra del Moral, Clarita Olvera, Maria Elena Rodriguez, and Agustin Lopez Munguia
BMC Biochem. 2008; 9: 6. Published online 2008 January 31. doi: 10.1186/1471-2091-9-6.
PMCID: PMC2270844
Prion protein insertional mutations increase aggregation propensity but not fiber stability
Tejas Kalastavadi and Heather L True
BMC Biochem. 2008; 9: 7. Published online 2008 March 17. doi: 10.1186/1471-2091-9-7.
PMCID: PMC2276218
The pyrroloquinoline quinone biosynthesis pathway revisited: A structural approach
Sandra Puehringer, Moritz Metlitzky, and Robert Schwarzenbacher
BMC Biochem. 2008; 9: 8. Published online 2008 March 27. doi: 10.1186/1471-2091-9-8.
PMCID: PMC2294125
Pro-protein convertases control the maturation and processing of the iron-regulatory protein, RGMc/hemojuvelin
David Kuninger, Robin Kuns-Hashimoto, Mahta Nili, and Peter Rotwein
BMC Biochem. 2008; 9: 9. Published online 2008 April 2. doi: 10.1186/1471-2091-9-9.
PMCID: PMC2323002
Characterization and site-directed mutagenesis of Wzb, an O-phosphatase from Lactobacillus rhamnosus
Gisèle LaPointe, Danièle Atlan, and Christophe Gilbert
BMC Biochem. 2008; 9: 10. Published online 2008 April 3. doi: 10.1186/1471-2091-9-10.
PMCID: PMC2364625
A new classification system for bacterial Rieske non-heme iron aromatic ring-hydroxylating oxygenases
Ohgew Kweon, Seong-Jae Kim, Songjoon Baek, Jong-Chan Chae, Michael D Adjei, Dong-Heon Baek, Young-Chang Kim, and Carl E Cerniglia
BMC Biochem. 2008; 9: 11. Published online 2008 April 3. doi: 10.1186/1471-2091-9-11.
PMCID: PMC2358900
Regulation of 5'-adenosine monophosphate deaminase in the freeze tolerant wood frog, Rana sylvatica
Christopher A Dieni and Kenneth B Storey
BMC Biochem. 2008; 9: 12. Published online 2008 April 22. doi: 10.1186/1471-2091-9-12.
PMCID: PMC2375871
The Mycobacterium tuberculosis Rv2540c DNA sequence encodes a bifunctional chorismate synthase
Fernanda Ely, José ES Nunes, Evelyn K Schroeder, Jeverson Frazzon, Mário S Palma, Diógenes S Santos, and Luiz A Basso
BMC Biochem. 2008; 9: 13. Published online 2008 April 29. doi: 10.1186/1471-2091-9-13.
PMCID: PMC2386126
Isolation, characterization and molecular cloning of Duplex-Specific Nuclease from the hepatopancreas of the Kamchatka crab
Veronika E Anisimova, Denis V Rebrikov, Dmitry A Shagin, Valery B Kozhemyako, Natalia I Menzorova, Dmitry B Staroverov, Rustam Ziganshin, Laura L Vagner, Valery A Rasskazov, Sergey A Lukyanov, and Alex S Shcheglov
BMC Biochem. 2008; 9: 14. Published online 2008 May 21. doi: 10.1186/1471-2091-9-14.
PMCID: PMC2413221
Characterization of Bacillus anthracis arginase: effects of pH, temperature, and cell viability on metal preference
Ryan J Viator, Richard F Rest, Ellen Hildebrandt, and David J McGee
BMC Biochem. 2008; 9: 15. Published online 2008 June 3. doi: 10.1186/1471-2091-9-15.
PMCID: PMC2423185
Modulation of the pharmacological effects of enzymatically-active PLA2 by BTL-2, an isolectin isolated from the Bryothamnion triquetrum red alga
Simone CB Oliveira, Fabiana V Fonseca, Edson Antunes, Enilton A Camargo, Rafael P Morganti, Ricardo Aparício, Daniela O Toyama, Luís OS Beriam, Eudismar V Nunes, Benildo S Cavada, Celso S Nagano, Alexandre H Sampaio, Kyria S Nascimento, and Marcos H Toyama
BMC Biochem. 2008; 9: 16. Published online 2008 June 6. doi: 10.1186/1471-2091-9-16.
PMCID: PMC2443151
Molecular evolution of B6 enzymes: Binding of pyridoxal-5'-phosphate and Lys41Arg substitution turn ribonuclease A into a model B6 protoenzyme
Rosa A Vacca, Sergio Giannattasio, Guido Capitani, Ersilia Marra, and Philipp Christen
BMC Biochem. 2008; 9: 17. Published online 2008 June 19. doi: 10.1186/1471-2091-9-17.
PMCID: PMC2443152
Functional and biochemical characterization of the 20S proteasome in a yeast temperature-sensitive mutant, rpt6-1
Aktar Uzzaman Chouduri, Toshinobu Tokumoto, Hideo Dohra, Takashi Ushimaru, and Shinpei Yamada
BMC Biochem. 2008; 9: 20. Published online 2008 July 21. doi: 10.1186/1471-2091-9-20.
PMCID: PMC2515314
The central proline rich region of POB1/REPS2 plays a regulatory role in epidermal growth factor receptor endocytosis by binding to 14-3-3 and SH3 domain-containing proteins
Laura Tomassi, Anna Costantini, Salvatore Corallino, Elena Santonico, Martina Carducci, Gianni Cesareni, and Luisa Castagnoli
BMC Biochem. 2008; 9: 21. Published online 2008 July 22. doi: 10.1186/1471-2091-9-21.
PMCID: PMC2494995
Mitochondrial oxidative phosphorylation in autosomal dominant optic atrophy
Vladimir I Mayorov, Angela J Lowrey, Valerie Biousse, Nancy J Newman, Susan D Cline, and Michael D Brown
BMC Biochem. 2008; 9: 22. Published online 2008 September 10. doi: 10.1186/1471-2091-9-22.
PMCID: PMC2547100
YB-1 promotes microtubule assembly in vitro through interaction with tubulin and microtubules
Konstantin G Chernov, Alain Mechulam, Nadezhda V Popova, David Pastre, Elena S Nadezhdina, Olga V Skabkina, Nina A Shanina, Victor D Vasiliev, Anne Tarrade, Judith Melki, Vandana Joshi, Sonia Baconnais, Flavio Toma, Lev P Ovchinnikov, and Patrick A Curmi
BMC Biochem. 2008; 9: 23. Published online 2008 September 15. doi: 10.1186/1471-2091-9-23.
PMCID: PMC2557009
Inversion of allosteric effect of arginine on N-acetylglutamate synthase, a molecular marker for evolution of tetrapods
Nantaporn Haskins, Maria Panglao, Qiuhao Qu, Himani Majumdar, Juan Cabrera-Luque, Hiroki Morizono, Mendel Tuchman, and Ljubica Caldovic
BMC Biochem. 2008; 9: 24. Published online 2008 September 18. doi: 10.1186/1471-2091-9-24.
PMCID: PMC2566978
The Serine/threonine kinase Stk33 exhibits autophosphorylation and phosphorylates the intermediate filament protein Vimentin
Bastienne Brauksiepe, Alejandro O Mujica, Harald Herrmann, and Erwin R Schmidt
BMC Biochem. 2008; 9: 25. Published online 2008 September 23. doi: 10.1186/1471-2091-9-25.
PMCID: PMC2567967
Construction of recB-recD genetic fusion and functional analysis of RecBDC fusion enzyme in Escherichia coli
Oytun Portakal and Pakize Doğan
BMC Biochem. 2008; 9: 27. Published online 2008 October 10. doi: 10.1186/1471-2091-9-27.
PMCID: PMC2586629
The FF domains of yeast U1 snRNP protein Prp40 mediate interactions with Luc7 and Snu71
Claudia Ester and Peter Uetz
BMC Biochem. 2008; 9: 29. Published online 2008 November 11. doi: 10.1186/1471-2091-9-29.
PMCID: PMC2613882
An earthworm protease cleaving serum fibronectin and decreasing HBeAg in HepG2.2.15 cells
Xue-Qing Wang, Lan Chen, Rong Pan, Jing Zhao, Ying Liu, and Rong-Qiao He
BMC Biochem. 2008; 9: 30. Published online 2008 November 24. doi: 10.1186/1471-2091-9-30.
PMCID: PMC2611985
Lipid bilayer composition influences small multidrug transporters
Kalypso Charalambous, David Miller, Paul Curnow, and Paula J Booth
BMC Biochem. 2008; 9: 31. Published online 2008 November 25. doi: 10.1186/1471-2091-9-31.
PMCID: PMC2605743
Modification of carbonic anhydrase II with acetaldehyde, the first metabolite of ethanol, leads to decreased enzyme activity
Fatemeh Bootorabi, Janne Jänis, Jarkko Valjakka, Sari Isoniemi, Pirjo Vainiotalo, Daniela Vullo, Claudiu T Supuran, Abdul Waheed, William S Sly, Onni Niemelä, and Seppo Parkkila
BMC Biochem. 2008; 9: 32. Published online 2008 November 27. doi: 10.1186/1471-2091-9-32.
PMCID: PMC2605449
Methodology Articles
Biochemical characterization and cellular imaging of a novel, membrane permeable fluorescent cAMP analog
Daniela Moll, Anke Prinz, Cornelia M Brendel, Marco Berrera, Katrin Guske, Manuela Zaccolo, Hans-Gottfried Genieser, and Friedrich W Herberg
BMC Biochem. 2008; 9: 18. Published online 2008 June 25. doi: 10.1186/1471-2091-9-18.
PMCID: PMC2443153
Purification and characterization of recombinant human renin for X-ray crystallization studies
Zhongren Wu, Maria G Cappiello, Boyd B Scott, Yuri Bukhtiyarov, and Gerard M McGeehan
BMC Biochem. 2008; 9: 19. Published online 2008 June 26. doi: 10.1186/1471-2091-9-19.
PMCID: PMC2453115
Immunoaffinity purification and characterization of mitochondrial membrane-bound D-3-hydroxybutyrate dehydrogenase from Jaculus orientalis
Driss Mountassif, Pierre Andreoletti, Zakaria El Kebbaj, Adnane Moutaouakkil, Mustapha Cherkaoui-Malki, Norbert Latruffe, and M'hammed Saïd El Kebbaj
BMC Biochem. 2008; 9: 26. Published online 2008 September 30. doi: 10.1186/1471-2091-9-26.
PMCID: PMC2572057
Displacement affinity chromatography of protein phosphatase one (PP1) complexes
Greg BG Moorhead, Laura Trinkle-Mulcahy, Mhairi Nimick, Veerle De Wever, David G Campbell, Robert Gourlay, Yun Wah Lam, and Angus I Lamond
BMC Biochem. 2008; 9: 28. Published online 2008 November 10. doi: 10.1186/1471-2091-9-28.
PMCID: PMC2587467
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