Vertebrates
Mammals
Primates
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Homo sapiens | human | Build 36.3 |
   
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| Build 35.1 |
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| Macaca mulatta | rhesus macaque | Build 1.1 |
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| Pan troglodytes | chimpanzee | Build 2.1 |
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Rodents
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Mus musculus | laboratory mouse | Build 37.1 |
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| Build 36.1 |
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| Rattus norvegicus | rat | RGSC v3.4 |
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Monotremes
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Ornithorhynchus anatinus | duck-billed platypus | Build 1.1 |
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Marsupials
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Monodelphis domestica | opossum | MonDom5 |
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Other Mammals
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Bos taurus | cattle | Btau_4.0 |
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| Build 3.1 (based on Btau_3.1) |
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| Canis lupus familiaris | dog | Build 2.1 |
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| Equus caballus | horse | EquCab2.0 |
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| Felis catus | cat |
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| Ovis aries | sheep |
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| Sus scrofa | pig | Sscrofa5 |
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Other Vertebrates
Invertebrates
Insects
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Acyrthosiphon pisum | pea aphid | Build 1.1 |
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| Anopheles gambiae | African malaria mosquito | AgamP3.3 |
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| Apis mellifera | honey bee | Amel_4.0 |
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| Amel_2.0 |
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| Drosophila melanogaster | fruit fly | Release 5.2 |
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| Drosophila pseudoobscura | Release 2.0 |
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| Nasonia vitripennis | jewel wasp | Build 1.1 |
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| Tribolium castaneum | red flour beetle | Build 2.1 |
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Nematode
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Caenorhabditis briggsae | Build 1.1 |
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| Caenorhabditis elegans | nematode | WS190 |
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Echinoderms
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Strongylocentrotus purpuratus | purple sea urchin | Build 2.1 |
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| Build 1.1 |
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Other Invertebrates
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Ciona intestinalis | Build 1.1 |
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Protozoa
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Babesia bovis | Build 1.1 |
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| Cryptosporidium hominis | Build 1.1 |
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| Cryptosporidium parvum | Build 1.1 |
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| Dictyostelium discoideum | social amoeba | Build 2.1 |
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| Eimeria tenella |
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| Giardia intestinalis | Build 1.1 |
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| Leishmania braziliensis | Build 1.1 |
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| Leishmania infantum | Build 1.1 |
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| Leishmania major | Build 1.1 |
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| Paramecium tetraurelia | Build 1.1 |
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| Plasmodium berghei | Build 1.1 |
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| Plasmodium chabaudi | Build 1.1 |
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| Plasmodium falciparum | Build 1.1 |
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| Plasmodium yoelii | Build 1.1 |
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| Tetrahymena thermophila | Build 1.1 |
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| Theileria parva | Build 1.1 |
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| Trichomonas vaginalis | Build 1.1 |
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| Trypanosoma brucei | Build 1.1 |
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Plants
Flowering Plants
Monocots
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Aegilops tauschii |
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| Aegilops umbellulata |
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| Allium cepa | onion |
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| Asparagus officinalis | asparagus |
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| Avena sativa | cultivated oat |
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| Eragrostis tef | tef |
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| Hordeum bulbosum |
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| Hordeum vulgare | barley |
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| Lolium perenne | ryegrass |
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| Oryza sativa | rice | RAP Build 3 |
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| Secale cereale | rye |
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| Setaria italica | foxtail millet |
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| Sorghum bicolor | sorghum |
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| Triticum aestivum | wheat |
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| Triticum turgidum | durum wheat |
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| Zea mays | maize |
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Eudicots
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Arabidopsis thaliana | thale cress | Build 8.1 |
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| Beta vulgaris | beet |
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| Brassica juncea | brown mustard |
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| Brassica napus | rapeseed |
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| Brassica nigra | black mustard |
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| Brassica oleracea |
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| Brassica rapa | field mustard |
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| Capsicum annuum | pepper |
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| Glycine max | soybean |
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| Lotus japonicus | birdsfoot deervetch |
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| Manihot esculenta | cassava |
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| Medicago sativa | alfalfa |
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| Medicago truncatula | barrel medic |
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| Phaseolus vulgaris | kidney bean |
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| Populus trichocarpa | poplar | Build 1.2 |
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| Prunus dulcis | sweet almond |
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| Quercus robur | oak |
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| Solanum lycopersicoides | nightshade |
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| Solanum lycopersicum | tomato |
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| Solanum melongena | eggplant |
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| Solanum peruvianum | Peruvian tomato |
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| Solanum tuberosum | potato |
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| Theobroma cacao | cocoa |
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| Vigna radiata | mungbean |
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| Vitis vinifera | wine grape |
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Algae
Fungi
| Scientific name | Common name | Build | Tools |
|---|---|---|---|
| Aspergillus clavatus | Build 1.1 |
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| Aspergillus fumigatus | Build 2.1 |
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| Aspergillus niger | Build 1.1 |
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| Candida glabrata | Build 1.1 |
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| Cryptococcus neoformans | Build 2.1 |
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| Debaryomyces hansenii | Build 1.1 |
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| Encephalitozoon cuniculi | Build 1.1 |
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| Eremothecium gossypii | Build 3.1 |
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| Gibberella zeae | Build 1.2 |
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| Kluyveromyces lactis | Build 1.1 |
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| Magnaporthe grisea | rice blast fungus | Build 3.1 |
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| Neurospora crassa | Build 2.1 |
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| Pichia stipitis | Build 1.1 |
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| Saccharomyces cerevisiae | baker's yeast | Build 2.1 |
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| Schizosaccharomyces pombe | fission yeast | Build 1.1 |
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| Ustilago maydis | Build 1.1 |
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| Yarrowia lipolytica | Build 1.1 |
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