Jay Robert Knutson's Web Page

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Publications

1 Xu J, Toptygin D, Graver KJ, Albertini RA, Savtchenko RS, Meadow ND, Roseman S, Callis PR, Brand L, Knutson JR.
Ultrafast Fluorescence Dynamics of Tryptophan in the Proteins Monellin and IIA(Glc).
J Am Chem Soc 128(4): 1214-1221, 2006. [Text Abstract on PubMed]
2 Blinova K, Carroll S, Bose S, Smirnov AV, Harvey JJ, Knutson JR, Balaban RS.
Distribution of mitochondrial NADH fluorescence lifetimes: steady-state kinetics of matrix NADH interactions.
Biochemistry 44(7): 2585-94, 2005. [Text Abstract on PubMed]
3 Harvey JJ, Lee SP, Chan EK, Kim JH, Hwang ES, Cha CY, Knutson JR, Han MK.
Characterization and applications of CataCleave probe in real-time detection assays.
Anal Biochem 333(2): 246-55, 2004. [Text Abstract on PubMed]
4 He L, Bradrick TD, Karpova TS, Wu X, Fox MH, Fischer R, McNally JG, Knutson JR, Grammer AC, Lipsky PE.
Flow cytometric measurement of fluorescence (Förster) resonance energy transfer from cyan fluorescent protein to yellow fluorescent protein using single-laser excitation at 458 nm.
Cytometry A 53(1): 39-54, 2003. [Text Abstract on PubMed]
5 Kim SJ, Beard WA, Harvey J, Shock DD, Knutson JR, Wilson SH.
Rapid segmental and subdomain motions of DNA polymerase beta.
J Biol Chem 278(7): 5072-81, 2003. [Text Abstract on PubMed]
6 Han MK, Lin P, Paek D, Harvey JJ, Fuior E, Knutson JR.
Fluorescence studies of pyrene maleimide-labeled translin: excimer fluorescence indicates subunits associate in a tail-to-tail configuration to form octamer.
Biochemistry 41(10): 3468-76, 2002. [Text Abstract on PubMed]
7 Tcherkasskaya O, Knutson JR, Bowley SA, Frank MK, Gronenborn AM.
Nanosecond dynamics of the single tryptophan reveals multi-state equilibrium unfolding of protein GB1.
Biochemistry 39(37): 11216-26, 2000. [Text Abstract on PubMed]
8 Tcherkasskaya O, Ptitsyn OB, Knutson JR.
Nanosecond dynamics of tryptophans in different conformational states of apomyoglobin proteins.
Biochemistry 39(7): 1879-89, 2000. [Text Abstract on PubMed]
9 al-Damluji S, Porter D, Krsmanovic LZ, Knutson JR, Kopin IJ.
Visual detection of transport-P in peptidergic neurones.
Br J Pharmacol 120(5): 876-82, 1997. [Text Abstract on PubMed]
10 Hawkins ME, Pfleiderer W, Balis FM, Porter D, Knutson JR.
Fluorescence properties of pteridine nucleoside analogs as monomers and incorporated into oligonucleotides.
Anal Biochem 244(1): 86-95, 1997. [Text Abstract on PubMed]
11 Lee SP, Xiao J, Knutson JR, Lewis MS, Han MK.
Zn2+ promotes the self-association of human immunodeficiency virus type-1 integrase in vitro.
Biochemistry 36(1): 173-80, 1997. [Text Abstract on PubMed]
12 Shen F, Triezenberg SJ, Hensley P, Porter D, Knutson JR.
Critical amino acids in the transcriptional activation domain of the herpesvirus protein VP16 are solvent-exposed in highly mobile protein segments. An intrinsic fluorescence study.
J Biol Chem 271(9): 4819-26, 1996. [Text Abstract on PubMed]
13 Shen F, Triezenberg SJ, Hensley P, Porter D, Knutson JR.
Transcriptional activation domain of the herpesvirus protein VP16 becomes conformationally constrained upon interaction with basal transcription factors.
J Biol Chem 271(9): 4827-37, 1996. [Text Abstract on PubMed]
14 Lee SP, Censullo ML, Kim HG, Knutson JR, Han MK.
Characterization of endonucleolytic activity of HIV-1 integrase using a fluorogenic substrate.
Anal Biochem 227(2): 295-301, 1995. [Text Abstract on PubMed]
15 Bubb MR, Knutson JR, Porter DK, Korn ED.
Actobindin induces the accumulation of actin dimers that neither nucleate polymerization nor self-associate.
J Biol Chem 269(41): 25592-7, 1994. [Text Abstract on PubMed]
16 Burrows SD, Doyle ML, Murphy KP, Franklin SG, White JR, Brooks I, McNulty DE, Scott MO, Knutson JR, Porter D.
Determination of the monomer-dimer equilibrium of interleukin-8 reveals it is a monomer at physiological concentrations.
Biochemistry 33(43): 12741-5, 1994. [Text Abstract on PubMed]
17 Kim SJ, Lewis MS, Knutson JR, Porter DK, Kumar A, Wilson SH.
Characterization of the tryptophan fluorescence and hydrodynamic properties of rat DNA polymerase beta.
J Mol Biol 244(2): 224-35, 1994. [Text Abstract on PubMed]
18 Lee SP, Porter D, Chirikjian JG, Knutson JR, Han MK.
A fluorometric assay for DNA cleavage reactions characterized with BamHI restriction endonuclease.
Anal Biochem 220(2): 377-83, 1994. [Text Abstract on PubMed]
19 Neyroz P, Desdouits F, Benfenati F, Knutson JR, Greengard P, Girault JA.
Study of the conformation of DARPP-32, a dopamine- and cAMP-regulated phosphoprotein, by fluorescence spectroscopy.
J Biol Chem 268(32): 24022-31, 1993. [Text Abstract on PubMed]
20 Knutson JR.
Alternatives to consider in fluorescence decay analysis.
Methods Enzymol 210: 357-74, 1992. [Text Abstract on PubMed]
21 Schmitt JM, Knüttel A, Knutson JR.
Interference of diffusive light waves.
J Opt Soc Am A 9(10): 1832-43, 1992. [Text Abstract on PubMed]
22 Chen RF, Knutson JR, Ziffer H, Porter D.
Fluorescence of tryptophan dipeptides: correlations with the rotamer model.
Biochemistry 30(21): 5184-95, 1991. [Text Abstract on PubMed]
23 Clague MJ, Knutson JR, Blumenthal R, Herrmann A.
Interaction of influenza hemagglutinin amino-terminal peptide with phospholipid vesicles: a fluorescence study.
Biochemistry 30(22): 5491-7, 1991. [Text Abstract on PubMed]
24 Green SM, Knutson JR, Hensley P.
Steady-state fluorescence and time-resolved fluorescence monitor changes in tryptophan environment in arginase from Saccharomyces cerevisiae upon removal of catalytic and structural metal ions.
Biochemistry 29(39): 9159-68, 1990. [Text Abstract on PubMed]
25 Han MK, Knutson JR, Roseman S, Brand L.
Sugar transport by the bacterial phosphotransferase system. Fluorescence studies of subunit interactions of enzyme I.
J Biol Chem 265(4): 1996-2003, 1990. [Text Abstract on PubMed]
26 Sackett DL, Knutson JR, Wolff J.
Hydrophobic surfaces of tubulin probed by time-resolved and steady-state fluorescence of nile red.
J Biol Chem 265(25): 14899-906, 1990. [Text Abstract on PubMed]
27 Davenport L, Knutson JR, Brand L.
Fluorescence studies of membrane dynamics and heterogeneity.
Subcell Biochem 14: 145-88, 1989. [Text Abstract on PubMed]
28 Davenport L, Wang JZ, Knutson JR.
Studies of lipid fluctuations using polarized fluorescence spectroscopy.
Prog Clin Biol Res 292: 97-106, 1989. [Text Abstract on PubMed]
29 Chen RF, Knutson JR.
Mechanism of fluorescence concentration quenching of carboxyfluorescein in liposomes: energy transfer to nonfluorescent dimers.
Anal Biochem 172(1): 61-77, 1988. [Text Abstract on PubMed]
30 Walbridge DG, Knutson JR, Brand L.
Nanosecond time-resolved fluorescence measurements during protein denaturation.
Anal Biochem 161(2): 467-78, 1987. [Text Abstract on PubMed]
31 Beechem JM, Knutson JR, Brand L.
Global analysis of multiple dye fluorescence anisotropy experiments on proteins.
Biochem Soc Trans 14(5): 832-5, 1986. [Text Abstract on PubMed]
32 Davenport L, Knutson JR, Brand L.
Anisotropy decay associated fluorescence spectra and analysis of rotational heterogeneity. 2. 1,6-Diphenyl-1,3,5-hexatriene in lipid bilayers.
Biochemistry 25(7): 1811-6, 1986. [Text Abstract on PubMed]
33 Davenport L, Knutson JR, Brand L.
Excited-state proton transfer of equilenin and dihydroequilenin: interaction with bilayer vesicles.
Biochemistry 25(5): 1186-95, 1986. [Text Abstract on PubMed]
34 Davenport L, Knutson JR, Brand L.
Studies of membrane heterogeneity using fluorescence associative techniques.
Faraday Discuss Chem Soc(81): 81-94, 1986. [Text Abstract on PubMed]
35 Knutson JR, Davenport L, Brand L.
Anisotropy decay associated fluorescence spectra and analysis of rotational heterogeneity. 1. Theory and applications.
Biochemistry 25(7): 1805-10, 1986. [Text Abstract on PubMed]
36 Knutson JR, Walbridge DG, Brand L.
Decay-associated fluorescence spectra and the heterogeneous emission of alcohol dehydrogenase.
Biochemistry 21(19): 4671-9, 1982. [Text Abstract on PubMed]
37 Lakowicz JR, Knutson JR.
Hindered depolarizing rotations of perylene in lipid bilayers. Detection by lifetime-resolved fluorescence anisotropy measurements.
Biochemistry 19(5): 905-11, 1980. [Text Abstract on PubMed]