The course will cover:
- Antibody modeling
- Biochemistry review
- Modeling considerations
- Techniques
- Advanced Visualization
- Servers: ConSurf, elNémo, MolMovDB, OPM
- PyMOL: movies with ProMol and eMovie, alternative representations, advanced lighting, electrostatic potential maps
- Chimera: viruses and surface slicing and dicing!
This is the eighth lecture in a nine-part series on computational structural biology presented by the NIAID Bioinformatics and Scientific IT Program. Please click on the following links to view and/or register for the other lectures. Protein Structure Analysis: Introduction and Visualization Introduction to Homology Modeling: Sequence Alignment and Template Selection Advanced Homology Modeling: Model Optimization, Alignment Improvement (Threading), Protein Complexes Loop Modeling and Protein Folding: Rosetta, Secondary Structure Predictions, Structure Validation, Database Mining Protein-Protein Docking: Complexes Revisited, Constraints, Multi-domain Proteins in silico Drug Screening: Small Molecule Docking Molecular Dynamics: Macromolecular Simulations Structural Biology Laboratory
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