Program blastn tblastx blastp blastx Database Mapped wheat ESTs Contigs containing mapped wheat ESTs Mapping probes (BCD, CDO etc.) Poaceae EST-SSRs TREP Triticeae Repeats, nonredundant Barley1 GeneChip exemplars Consensus sequences from Wheat SNP Assembly, dec02 All GrainGenes sequences
Enter sequence below in FASTA format Or load it from disk
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15) Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
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