PLoS Comput Biol Volume 5(1); January 2009

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Volume 5(1); January 2009

Research Articles

Questioning the Ubiquity of Neofunctionalization

Todd A. Gibson and Debra S. Goldberg

PLoS Comput Biol. 2009 January; 5(1): e1000252. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000252.

PMCID: PMC2597716

Polyamine Sharing between Tubulin Dimers Favours Microtubule Nucleation and Elongation via Facilitated Diffusion

Alain Mechulam, Konstantin G. Chernov, Elodie Mucher, Loic Hamon, Patrick A. Curmi, and David Pastré

PLoS Comput Biol. 2009 January; 5(1): e1000255. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000255.

PMCID: PMC2599886

Shape, Size, and Robustness: Feasible Regions in the Parameter Space of Biochemical Networks

Adel Dayarian, Madalena Chaves, Eduardo D. Sontag, and Anirvan M. Sengupta

PLoS Comput Biol. 2009 January; 5(1): e1000256. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000256.

PMCID: PMC2599888

| Abstract | Full Text | PDF–689K |

Predicting Cellular Growth from Gene Expression Signatures

Edoardo M. Airoldi, Curtis Huttenhower, David Gresham, Charles Lu, Amy A. Caudy, Maitreya J. Dunham, James R. Broach, David Botstein, and Olga G. Troyanskaya

PLoS Comput Biol. 2009 January; 5(1): e1000257. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000257.

PMCID: PMC2599889

Evolutionary Sequence Modeling for Discovery of Peptide Hormones

Kemal Sonmez, Naunihal T. Zaveri, Ilan A. Kerman, Sharon Burke, Charles R. Neal, Xinmin Xie, Stanley J. Watson, and Lawrence Toll

PLoS Comput Biol. 2009 January; 5(1): e1000258. Published online 2009 January 9. doi: 10.1371/journal.pcbi.1000258.

PMCID: PMC2603333

| Abstract | Full Text | PDF–1.2M |

Deterministic Mechanical Model of T-Killer Cell Polarization Reproduces the Wandering of Aim between Simultaneously Engaged Targets

Mun Ju Kim and Ivan V. Maly

PLoS Comput Biol. 2009 January; 5(1): e1000260. Published online 2009 January 9. doi: 10.1371/journal.pcbi.1000260.

PMCID: PMC2603019

An Analysis of Enzyme Kinetics Data for Mitochondrial DNA Strand Termination by Nucleoside Reverse Transcription Inhibitors

Katherine V. Wendelsdorf, Zhuo Song, Yang Cao, and David C. Samuels

PLoS Comput Biol. 2009 January; 5(1): e1000261. Published online 2009 January 9. doi: 10.1371/journal.pcbi.1000261.

PMCID: PMC2603287

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		Other Issues: previous \| next \| latest \| archive Volume 5(1); January 2009 Research Articles Questioning the Ubiquity of Neofunctionalization Todd A. Gibson and Debra S. Goldberg PLoS Comput Biol. 2009 January; 5(1): e1000252. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000252. PMCID: PMC2597716 \| Abstract \| Full Text \| PDF–391K \| Supplementary Material \| Polyamine Sharing between Tubulin Dimers Favours Microtubule Nucleation and Elongation via Facilitated Diffusion Alain Mechulam, Konstantin G. Chernov, Elodie Mucher, Loic Hamon, Patrick A. Curmi, and David Pastré PLoS Comput Biol. 2009 January; 5(1): e1000255. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000255. PMCID: PMC2599886 \| Abstract \| Full Text \| PDF–964K \| Supplementary Material \| Shape, Size, and Robustness: Feasible Regions in the Parameter Space of Biochemical Networks Adel Dayarian, Madalena Chaves, Eduardo D. Sontag, and Anirvan M. Sengupta PLoS Comput Biol. 2009 January; 5(1): e1000256. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000256. PMCID: PMC2599888 \| Abstract \| Full Text \| PDF–689K \| Predicting Cellular Growth from Gene Expression Signatures Edoardo M. Airoldi, Curtis Huttenhower, David Gresham, Charles Lu, Amy A. Caudy, Maitreya J. Dunham, James R. Broach, David Botstein, and Olga G. Troyanskaya PLoS Comput Biol. 2009 January; 5(1): e1000257. Published online 2009 January 2. doi: 10.1371/journal.pcbi.1000257. PMCID: PMC2599889 \| Abstract \| Full Text \| PDF–579K \| Supplementary Material \| Evolutionary Sequence Modeling for Discovery of Peptide Hormones Kemal Sonmez, Naunihal T. Zaveri, Ilan A. Kerman, Sharon Burke, Charles R. Neal, Xinmin Xie, Stanley J. Watson, and Lawrence Toll PLoS Comput Biol. 2009 January; 5(1): e1000258. Published online 2009 January 9. doi: 10.1371/journal.pcbi.1000258. PMCID: PMC2603333 \| Abstract \| Full Text \| PDF–1.2M \| Deterministic Mechanical Model of T-Killer Cell Polarization Reproduces the Wandering of Aim between Simultaneously Engaged Targets Mun Ju Kim and Ivan V. Maly PLoS Comput Biol. 2009 January; 5(1): e1000260. Published online 2009 January 9. doi: 10.1371/journal.pcbi.1000260. PMCID: PMC2603019 \| Abstract \| Full Text \| PDF–514K \| Supplementary Material \| An Analysis of Enzyme Kinetics Data for Mitochondrial DNA Strand Termination by Nucleoside Reverse Transcription Inhibitors Katherine V. Wendelsdorf, Zhuo Song, Yang Cao, and David C. Samuels PLoS Comput Biol. 2009 January; 5(1): e1000261. Published online 2009 January 9. doi: 10.1371/journal.pcbi.1000261. PMCID: PMC2603287 \| Abstract \| Full Text \| PDF–261K \| Supplementary Material \|
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