CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. PNPLA1, Patatin-like phospholipase domain containing 1
Sequence ID:NM_173676

Database Links

UniGeneEntrez GeneOMIMSNPViewerAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 36318922 - 36384350

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40005581Full LengthBC103905patatin-like phospholipase domain containing 1
40005582Full LengthBC103906patatin-like phospholipase domain containing 1
40005583Full LengthBC103907patatin-like phospholipase domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775947  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_173676 NP_775947 Q8N8W4 Patatin

Related Sequences

 
mRNAGenPeptSwissProt
BC103905 AAI03906 Q8N8W4
BC103906 AAI03907 Q8N8W4
BC103907 AAI03908 Q8N8W4
AK096074 BAC04697 Q8N8W4
AM182887 CAJ58679 Q8N8W4

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PNPLA1 NP_775947 M.musculus Pnpla1 433091 Gene Info NP_001030057 61
R.norvegicus Pnpla1 361812   XP_342106 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.