Alphabetical:
CGAP Data
Quick Links:
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TOOLS
All the NCI tools presented on the CGAP web site are listed below, organized by
biological function. The same tools are listed alphabetically on the left side bar.
Tools to Find Genes |
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| Clone Finder | Generates a list
of the most relaible clones from a list of UniGene clusters. |
| Gene Finder |
Finds genes based on various search criteria and links to gene information from NCBI and
NCI databases. |
| Batch Gene Finder |
Finds genes from a list of UniGene cluster numbers,
GenBank accessions, or LocusLink identifiers, and links to gene information from NCBI and
NCI databases. |
| GO Browser |
Classifies human and mouse genes by molecular function, biological process, and cellular component. |
| Nucleotide BLAST
| Finds genes based on nucleotide sequence similarities. |
Tools to Examine Chromosomes |
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Expression-Based SNP Imagemaps |
Find SNPs based on cancer type and chromosome. |
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FISH-mapped BACs |
Find BAC clones, available to the public, that integrate the cytogenetic and physical maps of the human genome. |
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Genetic and Physical SNP Maps |
Show genetic and physical locations of confirmed, validated, and predicted SNPs. |
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Mitelman Database |
CGAP has developed web-based tools to search the Mitelman
Database (a genome-wide map of chromosomal breakpoints in human cancer). |
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Recurrent Aberrations |
CGAP has developed a tool to search the Mitelamn data of
Recurrent Aberrations in cancer. |
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SNP500Cancer |
Finds SNPs that are of immediate
importance to molecular epidemiology studies in cancer. |
Tools to Find SNPs |
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CGAP SNP Index |
Searches for candidate SNPs by gene name, gene symbol, or GenBank accession number. |
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Expression-Based SNP Imagemaps |
Find SNPs based on cancer type and chromosome. |
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Genetic and Physical SNP Maps |
Show genetic and physical locations of confirmed, validated, and predicted SNPs. |
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SNP Gene Viewer |
View maps of SNPs on human reference sequences and MGC sequences, with predictions of protein coding changes.
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SNP500Cancer |
Finds SNPs that are of immediate
importance to molecular epidemiology studies in cancer. |
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