![[logo] US EPA](https://webarchive.library.unt.edu/eot2008/20081106011000im_/http://www.epa.gov/epafiles/images/logo_epaseal.gif){kind=logo}
Selected Publications for Center:
EAGLES - Consortium for Estuarine Ecoindicator Research for the Gulf of Mexico
Grant Number R829458
Other views: All publications Journal articles Publications submitted after final report Redisplay this page with Reference Title, Journal, and Author Columns Display this page in RIS format
| Reference Type | Citation | Progress Report Year | Document Sources |
|---|---|---|---|
| Book Chapter | Brouwer M, Brown-Peterson NJ, Larkin P, Manning S, Denslow Rose K. Molecular and organismal indicators of chronic and intermittent hypoxia in marine crustacean. In: Bortone S, ed. Estuarine Indicators. Boca Raton, FL: CRC Press. 2005;17:261-276. |
R829458C003 (2003) R829458C003 (2005) |
|
| Book Chapter | Hiramatsu N, Cheek AO, Sullivan CV, Matsubara T, et al. Vitellogenesis and endocrine disruption. In: Mommsen TP, Moon TW, eds. Biochemistry and Molecular Biology of Fishes, Volume 6, Environmental Toxicology. New York and Amsterdam: Elsevier, 2005. |
R829458C005 (2004) |
not available |
| Book Chapter | Rakocinski CF, Zapfe GA. Macrobenthic process indicators of estuarine condition. In:Bortone S, ed. Estuarine Indicators. Boca Raton, FL:CRC Press. 2005;20:315-331. |
R829458C008 (2003) R829458C008 (2004) R829458C008 (2005) |
|
| Book Chapter | Snyder RA , Lewis MA, Nocker A, Lepo JE. Microbial biofilms as integrative sensors of environmental quality. In: Bortone SA, ed. Estuarine Indicators. Boca Raton, FL: CRC Press LLC, 2005, pp. 111-126. |
R829458C002 (2003) R829458C002 (2004) R829458C002 (2005) |
|
| Journal Article | Breitburg DL, Adamack A, Rose KA, Kolesar SE, Decker MB, Purcell JE, Keister JE, Cowan JH. The pattern and influence of low dissolved oxygen in the Patuxent River, a seasonally hypoxic estuary. Estuaries 2003;26(2A):280-297. |
R829458C009 (2003) |
not available |
| Journal Article | Brouwer M, Larkin P, Brown-Peterson N, King C, et al. Effects of hypoxia on gene and protein expression in the blue crab, Callinectes sapidus. Marine Environmental Research 2004;58(2-5):787-792. |
R829458C003 (2003) R829458C003 (2004) |
not available |
| Journal Article | Brouwer M, Brown-Peterson NJ, Larkin P, Patel V, Denslow N, Manning S, Brouwer TH. Molecular and whole animal responses of grass shrimp, Palaemonetes pugio, exposed to chronic hypoxia. Journal of Experimental Marine Biology and Ecology 2007;341(1):16-31. |
R829458C003 (2005) |
|
| Journal Article | Brown-Peterson NJ, Larkin P, Denslow N, King C, Manning S, Brouwer M. Molecular indicators of hypoxia in the blue crab Callinectes sapidus. Marine Ecology Progress Series 2005;286:203-215. |
R829458C003 (2004) R829458C003 (2005) |
|
| Journal Article | Popular article featuring Cheek & Thomas projects: Janet Raloff. Choked Up: How dead zones affect fish reproduction. Science News 2004;166(20):309. |
R829458C005 (2004) |
not available |
| Journal Article | El Fantroussi S, Urakawa H, Bernhard AE, Kelly JJ, Smidt H, Yershov GM, Noble PA, Stahl DA. Direct profiling of environmental microbial populations by thermal dissociation analysis of native ribosomal RNAs hybridized to oligonucleotide microarrays. Applied and Environmental Microbiology 2003;69(4):2377-2382. |
R829458C004 (2003) |
not available |
| Journal Article | Fuiman LA, Rose KA, Cowan JH, Smith EP. Survival skills required for predator evasion by fish larvae and their relationship to laboratory measures of performance. Animal Behaviour 1993;45(6):1101-1116. |
R829458C009 (2004) |
not available |
| Journal Article | Fuiman LA, Rose KA, Cowan Jr. JH, Smith EP. Survival skills required for predator evasion by fish larvae and their relation to laboratory measures of performance. Animal Behaviour 2006;71(6):1389-1399. |
R829458C009 (2005) |
|
| Journal Article | Gough HL, Dahl AL, Tribou E, Noble PA, Gaillard J-F, Stahl DA. High sulfate reduction rates indicate stimulation of activity in metal-contaminated sediments. Science. |
R829458C004 (2003) R829458C004 (2004) |
not available |
| Journal Article | Han LH, Jordan KJ. Estimating and mapping chlorophyll-a concentration in Pensacola Bay, Florida using Landsat ETM+ data. International Journal of Remote Sensing 2005;26(23):5245-5254. |
R829458C001 (2004) R829458C001 (2005) |
not available |
| Journal Article | Han LH. Estimating chlorophyll-a concentration using first-derivative spectra in coastal water. International Journal of Remote Sensing 2005;26(23):5235-5244 |
R829458C001 (2004) R829458C001 (2005) |
not available |
| Journal Article | Kelly JJ, Siripong S, McCormack J, Janus LR, Urakawa H, El Fantroussi S, Noble PA, Sappelsa L, Rittmann BE, Stahl DA. DNA microarray detection of nitrifying bacterial 16S rRNA in wastewater treatment plant samples. Water Research 2005;39(14):3229-3238. |
R829458C004 (2005) |
|
| Journal Article | Lewitus AJ, White DL, Tymowski RG, Geesey ME, et al. Adapting the CHEMTAX method for assessing phytoplankton community composition in southeastern U.S. estuaries. Estuaries 2005;28(1):160-172. |
R829458C004 (2004) R829458C004 (2005) |
|
| Journal Article | Martinez ML, Landry C, Boehm R, Manning S, Cheek AO, Rees BB. Effects of long-term hypoxia on enzymes of carbohydrate metabolism in the Gulf killifish, Fundulus grandis. Journal of Experimental Biology 2006;209(19):3851-3861. |
R829458C005 (2005) |
|
| Journal Article | Morris JT, Porter D, Neet M, Noble PA, Schmidt L, Lapine LA, Jensen JR. Integrating LIDAR elevation data, multi-spectral imagery and neural network modelling for marsh characterization. International Journal of Remote Sensing 2005;26(23):5221-5234. |
R828677C003 (2004) R828677C003 (Final) R829458C004 (2005) |
|
| Journal Article | Morris J, Porter D, Neet M, Noble P, Jensen J. LIDAR-derived elevational distributions of salt and brackish marshes at North Inlet, SC and land-use classification by artificial neural network. International Journal of Remote Sensing 2005;26(23):5221-5234. |
R829458C004 (2003) |
not available |
| Journal Article | Moss JA, Nocker A, Lepo JE, Snyder RA. Stability and change in estuarine biofilm bacterial community diversity. Applied and Environmental Microbiology 2006;72(9):5679-5688. |
R829458C002 (2005) |
|
| Journal Article | Moss JA, Lepo JE, Snyder RA. Fluorescein diacetate as a surrogate for estuarine biofilm microbial activity. Journal of Microbial Methods. |
R829458C002 (2004) |
not available |
| Journal Article | Moss JA, Nocker A, Lepo JE, Snyder RA. Incorporating DNA sequence comparisons in measures of prokaryotic community diversity using the taxonomic distinctness concept. Applied and Environmental Microbiology. |
R829458C002 (2004) |
not available |
| Journal Article | Murphy CA, Rose KA, Thomas P. Modeling vitellogenesis in female fish exposed to environmental stressors: predicting the effects of endocrine disturbance due to exposure to a PCB mixture and cadmium. Reproductive Toxicology 2005;19(3):395-409. |
R829458C005 (2003) R829458C009 (2003) |
not available |
| Journal Article | Niemi G, Wardrop D, Brooks R, Anderson S, Brady V, Paerl H , Rakocinski C, Brouwer M, Levinson B, McDonald M. Rationale for a new generation of ecological indicators for coastal waters. Environmental Health Perspectives 2004;112(9):979-986. |
R828675 (2004) R828675 (Final) R828677C001 (Final) R828684 (Final) R829458C003 (2003) R829458C008 (2003) R829458C008 (2004) |
not available |
| Journal Article | Noble PA, Tymowski RG, Morris JT, Fletcher M, Lewitus AJ. Comparing phytoplankton community pigment composition in two U.S. Southeastern salt marsh estuaries differing in freshwater drainage. Applied and Environmental Microbiology 2003;69(7):4129-4143. |
R829458C004 (2003) R829458C004 (2005) |
|
| Journal Article | Noble PA, Tribou E. Neuroet: an easy-to-use artificial neural network for ecological and biological modeling. Ecological Modelling. |
R829458C004 (2004) |
not available |
| Journal Article | Nocker A, Lepo JE, Proctor LM, Huggins T, et al. Comparison of nascent bacterial biofilm communities in an estuarine seagrass and a sandflat habitat. Aquatic Microbial Ecology. |
R829458C002 (2004) |
not available |
| Journal Article | Nocker A, Lepo JE, Snyder RA. Diversity of microbial biofilm communities associated with an oyster reef and an adjacent muddy-sand bottom habitat. Applied and Environmental Microbiology 2004;70(11):6834-6845. |
R829458C002 (2003) R829458C002 (2004) |
not available |
| Journal Article | Nocker A, Lepo JE, Martin LL, Snyder RA. Effect of dissolved oxygen on the development of the microbial heterotrophic community of an estuarine biofilm with particular regard to sulfate reducing prokaryotes. Applied and Environmental Microbiology. |
R829458C002 (2004) |
not available |
| Journal Article | Nocker A, Lepo JE, Proctor LM, Snyder RA. Molecular characterization of the bacterial biofilm community in an estuarine bay comprising a seagrass and a sandflat habitat. Microbial Ecology. |
R829458C002 (2003) R829458C002 (2004) |
not available |
| Journal Article | Nocker A, Lepo JE, Snyder RA. Influence of an oyster reef on development of the microbial heterotrophic community of an estuarine biofilm. Applied and Environmental Microbiology 2004;70(11):6834-6845 |
R829458C002 (2004) |
not available |
| Journal Article | Pozhitkov A, Chernov B, Yershov G, Noble PA. Evaluation of gel-pad oligonucleotide microarray technology by using artificial neural networks. Applied and Environmental Microbiology 2005;71(12):8663-8676. |
R829458C004 (2004) R829458C004 (2005) |
|
| Journal Article | Pozhitkov A, Noble PA, Domazet-Lošo T, Nolte AW, Sonnenberg R, Staehler P, Beier M, Tautz D. Tests of rRNA hybridization to microarrays suggest that hybridization characteristics of oligonucleotide probes for species discrimination cannot be predicted. Nucleic Acids Research 2006;34(9):e66. |
R829458C004 (2005) |
|
| Journal Article | Richmond CE, Breitburg DL, Rose KA. The effect of stress tolerance on the relationship between species richness and system function. Ecological Modelling. |
R829458C009 (2004) |
not available |
| Journal Article | Rose KA, Murphy CA, Diamond SL, Fuiman LA, Thomas P. Using nested models and laboratory data for predicting population effects of contaminants on fish: a step towards a bottom-up approach for establishing causality in field studies. Human and Ecological Risk Assessment 2003;9(1):231-257. |
R829458C009 (2003) |
not available |
| Journal Article | Rose KA. Lack of relationship between simulated fish population responses and their life history traits: inadequate models, incorrect analysis, or site-specific factors?. Canadian Journal of Fisheries and Aquatic Sciences 2005;62(4):886-902 |
R829458C009 (2003) R829458C009 (2004) |
not available |
| Journal Article | Thomas P, Rahman MS, Kummer JA, Lawson S. Reproductive endocrine dysfunction in Atlantic croaker exposed to hypoxia. Marine Environmental Research 2006;62(Suppl 1):S249-252. |
R829458C005 (2005) |
|
| Journal Article | Tribou E, Lewitus AJ, Tymowski RG, Stahl DA, Noble PA. Application of neural computing approaches for determining the relationship between estuarine phytoplankton communities and environmental variables. Applied and Environmental Microbiology. |
R829458C004 (2003) |
not available |
| Journal Article | Urakawa H, El Fantroussi S, Noble PA, Kelly JJ, Stahl DA. Optimization of single-base-pair mismatch discrimination in oligonucleotide microarrays. Applied and Environmental Microbiology 2003;69(5):2848-2856. |
R829458C004 (2003) R829458C004 (2005) |
|
| Journal Article | Yang X, Liu Z. Quantifying landscape pattern and its change in an estuarine watershed using satellite imagery and landscape metrics. International Journal of Remote Sensing 2005;26(23):5297-5323. |
R829458C007 (2004) R829458C007 (2005) |
|
| Journal Article | Yang XJ. Remote sensing and GIS applications for estuarine ecosystem analysis:an overview. International Journal of Remote Sensing 2005;26(23):5347-5356. |
R829458C007 (2004) R829458C007 (2005) |
|
| Journal Article | Yang X. Estimating landscape imperviousness with remotely sensed imagery. IEEE Geoscience and Remote Sensing Letters 2006;3(1):6-9. |
R829458C007 (2004) R829458C007 (2005) |
|
| Journal Article | Yang X, Lo CP. Using a time series of satellite imagery to detect land use and land cover changes in the Atlanta, Georgia metropolitan area. International Journal of Remote Sensing 2002;23(9):1775-1798 |
R829458C007 (2003) |
not available |
| Journal Article | Yang X. Geospatial technologies for coastal and estuarine ecosystem analysis: status and research priorities. Journal of Coastal Research |
R829458C007 (2004) |
not available |
| Journal Article | Yang X, Liu Z. Use of satellite-derived landscape imperviousness index to characterize urban spatial growth. Computers, Environment and Urban Systems 2005; 29(5):524-540. |
R829458C007 (2003) R829458C007 (2004) R829458C007 (2005) |
|
| Journal Article | Yang X, Liu Z. Using satellite imagery and GIS for land-use and land-cover change mapping in an estuarine watershed. International Journal of Remote Sensing 2005;26(23):5275-5296. |
R829458C007 (2005) |
|
| Journal Article | Yang X, Liu Z. Use of remote sensing and landscape metrics to analyze estuarine landscape changing dynamics. International Journal of Remote Sensing . |
R829458C007 (2003) R829458C007 (2004) |
not available |