Projects

CHARACTERIZATION AND ENHANCEMENT OF PLANT RESISTANCE TO WATER-DEFICIT AND THERMAL STRESSES Appropriated (D)   Accession Number: 410456

MOLECULAR AND GENETIC ENHANCEMENT OF ABIOTIC STRESS TOLERANCE IN SORGHUM Appropriated (D)   Accession Number: 412477

SIMULTANEOUS IMPROVEMENT OF FIBER QUALITY AND HEAT TOLERANCE Reimbursable (R)   Accession Number: 413009

COTTON FIBER-SPECIFIC REPORTER SYSTEMS TO EVALUATE ABIOTIC STRESS EFFECTS ON FIBER DEVELOPMENT Reimbursable (R)   Accession Number: 413006

Publications

A SELECTION PROCEDURE FOR IDENTIFYING TRANSGENIC CELLS AND EMBRYOS OF COTTON WITHOUT THE USE OF ANTIBIOTICS - (Peer Reviewed Journal)

Burke, J.J., O'Mahony, P., Oliver, M.J., Velten, J.P. 2008. A selection procedure for identifying transgenic cells and embryos of cotton without the use of antibiotics. In Vitro Cellular & Development Biology. 44(4):246-253.

A simple method to determine transpiration efficiency in sorghum - (Peer Reviewed Journal)

Xin, Z., Payton, P.R., Franks, C.D., Burke, J.J. 2008. A simple method to determine transpiration efficiency in sorghum. Field Crops Research. 107(2):180-183.

Characterization of high temperature tolerance mechanisms in Maize - (Abstract)

Chen, J., Xu, W., Burke, J.J. 2008. Characterization of high temperature tolerance mechanisms in Maize[abstract]. Plant and Animal Genome Conference. San Diego, California. January 12-16, 2008.

Genetic diversity in pollen abiotic stress tolerance - (Abstract)

Burke, J.J. 2008. Genetic diversity in pollen abiotic stress tolerance[abstract]. Beltwide Cotton Conference. Nashville, Tennessee. January 8-11, 2008.

The impact of seed treatment on early crop development and ield - (Abstract)

Mcmichael, B.L., Burke, J.J., Wedegaertner, T.C. 2008. The impact of seed treatment on early crop development and yield. Beltwide Cotton Conference. Nashville, Tennessee. January 8-11, 2008.

Physiological genomics of abiotic stress responses in peanut - (Abstract)

Payton, P.R., Kottapalli, K., Burow, M., Burke, J.J., Tissue, D., Faircloth, W.H., Rowland, D., Gallo, M., Puppala, N. 2007. Physiological genomics of abiotic stress responses in peanut[abstract]. ComBio 2007 - Annual Meeting of the Australian Society for Biochemistry and Molecular Biology. Sydney, Australia. Spetember 22-26, 2007.

Genetic diversity in pollen abiotic stress tolerance - (Proceedings/Symposium) - (10-Sep-07)

Impact of drought and high temperature stresses on cotton fiber development and fiber quality - (Abstract)

Chen, J., Burke, J.J. 2007. Impact of drought and high temperature stresses on cotton fiber development and fiber quality[abstact]. World Cotton Research Conference. Lubbock, Texas. September 10-14, 2007.

The conserved role of FtsH11 protease in protection of photosynthetic system from high temperature stress in higher plants - (Abstract)

Chen, J., Xin, Z., Burke, J.J. 2007. The conserved role of FtsH11 protease in protection of photosynthetic system from high temperature stress in higher plants[abstract]. 14th International Congress on Photosynthesis. Glasgow, Scotland. July 22-27, 2007.

Role of FtsH11 protease in thermoprotection of photosynthetic systems - (Abstract)

Chen, J., Xin, Z., Burke, J.J. 2007. Role of FtsH11 protease in thermoprotection of photosynthetic systems[abstract]. Drymen Photosynthesis Satellite Workshop. Drymen, Scotland. July 18-21, 2007.

Proteomics of water-deficit stress in US peanut mini core accesions - (Abstract)

Kottapalli, K.R., Burow, G.B., Burke, J.J., Payton, P.R., Puppala, N., Rakwal, R., Burow, M. 2007. Proteomics of water-deficit stress in US peanut mini core accesions[abstract]. Plant Biology 2007. Chicago, Illinois. July 7-11, 2007.

FtsH11 Proteases play a critical role in high temperature stress tolerance in plants - (Abstract)

Chen, J., Xin, Z., Burke, J.J. 2007. FtsH11 Proteases play a critical role in high temperature stress tolerance in plants [abstract]. Plant Biology and Botany 2007 Joint Congress, July 7-11, 2007, Chicago, Illinois. CD-ROM

Drought tolerance classification via chlorophyll fluroescence in upland cotton (Gossypium hirsutum L.) - (Abstract)

Longenberger, P., Smith, W., Burke, J.J., McMichael, B.L. 2007. Drought tolerance classification via chlorophyll fluroescence in upland cotton (Gossypium hirsutum L.)[abstract]. ASA-CSSA-SSSA, November 4-8, 2007, New Orleans, Louisiana. Paper No. 155-3. CD-ROM.

Functional Roles of FtsH11 in Thermotolerance and Photosynthetic Stress in Plants - (Proceedings/Symposium)

Chen, J., Velten, J.P., Burke, J.J. 2007. Functional Roles of FtsH11 in Thermotolerance and Photosynthetic Stress in Plants[abstract]. Gordon Ressearch Conference: Temperature Stress in Plants. Ventura, California. January 21-26, 2007.

Physiological basis of early season cold tolerance in select Chinese and US germplasm of sorghum - (Abstract)

Burow, G.B., Franks, C.D., Burke, J.J. 2007. Physiological basis of early season cold tolerance in select Chinese and US germplasm of sorghum [abstract]. Biennial Grain Sorghum Research and Utilization Conference, January 14-16, 2007, Santa Ana Pueblo, New Mexico. p. 12-13.

Development of a TILLING Population for Sorghum Functional Genomics - (Abstract)

Xin, Z., Wang, M.L., Barkley, N.L., Franks, C.D., Burow, G.B., Pederson, G.A., Burke, J.J. 2007. Development of a TILLING Population for Sorghum Functional Genomics[abstract]. Plant Genome Conference. San Diego, California. January 13-17, 2007.

Chlorophyll fluorescence as an indicator of plant water status in cotton - (Proceedings/Symposium)

Longenberger, P.S., Smith, C.W., Burke, J.J., McMichael, B.L., Duke, S.E. 2007. Chlorophyll fluorescence as an indicator of plant water status in cotton [abstract]. National Cotton Council Beltwide Cotton Conference, January 9-12, 2007, New Orleans, Louisiana.

Molecular Characterization of the US Peanut Mini Core Collection Using Microsatellite Markers - (Peer Reviewed Journal)

Kottapalli, K., Burow, M., Burow, G.B., Burke, J.J., Puppala, N. 2007. Molecular characterization of the US peanut mini core collection using microsatellite markers. Crop Science. 47(4):1718-1727.

A Simple and Cost-effective Method to Screen for Transpiration Efficiency in Sorghum - (Abstract)

Xin, Z., Franks, C.D., Burke, J.J. 2006. A simple and cost-effective method to screen for transpiration efficiency in sorghum. International Center for Arid and Semiarid Land Studies.

PLANT LIPIDOMICS: DISCERNING BIOLOGICAL FUNCTION BY PROFILING PLANT COMPLEX LIPIDS USING MASS SPECTROMETRY - (Review Article)

Welti, R., Shah, J., Li, W., Li, M., Chen, J., Burke, J.J., Fauconnier, M., Chapman, K., Chye, M., Wang, X. 2007. Plant lipidomics: Discerning biological function by profiling plant complex lipids using mass spectrometry. Frontiers in Bioscience. 12:2494-2506.

EVALUATION OF SOURCE LEAF RESPONSES TO WATER-DEFICIT STRESSES IN COTTON USING A NOVEL STRESS BIOASSAY - (Peer Reviewed Journal)

Burke, J.J. 2007. Evaluation of source leaf responses to water-deficit stresses in cotton using a novel stress bioassay. Plant Physiology. 42(1):108-121.

EVALUATION OF ANTHOCYANIN PIGMENTATION AS AN INDICATOR OF CHILLING SENSITIVITY OF SORGHUM SEEDLINGS - (Peer Reviewed Journal)

Burow, G.B., Franks, C.D., Burke, J.J. 2006. Evaluation of anthocyanin pigmentation as an indicator of chilling sensitivity of sorghum seedlings. International Sorghum and Millets Newsletter. 47:39-42.

FTSH11 PROTEASE PLAYS A CRITICAL ROLE TO THERMOTOLERANCE IN ARABIDOPSIS - (Peer Reviewed Journal)

Chen, J., Burke, J.J., Velten, J.P., Xin, Z. 2006. FtsH11 protease plays a critical role in Arabidopsis thermotolerance. The Plant Journal. 48(1):73-84.

GENETIC DIVERSITY IN US PEANUT CORE OF CORE COLLECTION USING SSR MARKERS - (Abstract)

Kottapalli, R., Burow, G.B., Burow, M., Burke, J.J., Puppala, N. 2006. Genetic diversity in US peanut core of core collection using SSR markers[abstract]. Western Crop Science Congress. Las Cruces, NM. Jun 19-21, 2006.

GENETIC PROGRAMMING OF CROPS TO SUSTAIN OR INCREASE YIELDS UNDER REDUCED IRRIGATION - (Abstract)

Burke, J.J. 2005. Genetic programming of crops to sustain or increase yields under reduced irrigation[abstract]. World Water & Environmental Resources Congress.

MOLECULAR CHARACTERIZATION OF THE CORE SUBSET OF THE US PEANUT GERMPLASM CORE COLLECTION USING SSR MARKERS - (Proceedings/Symposium)

Kottapalli, K.R., Burow, G.B., Burke, J.J., Puppala, N., Burow, M.D. 2006. Molecular characterization of the core subset of the us peanut germplasm core collection using ssr markers. American Peanut Research and Education Society. Savannah, Georgia. July 11-14, 2006.

CHARACTERIZATION OF THE ARABIDOPSIS THERMOSENSITIVE MUTANT ATTS02 REVEALS AN IMPORTANT ROLE FOR GALACTOLIPIDS IN THERMOTOLERANCE - (Peer Reviewed Journal)

Chen, J., Burke, J.J., Xin, Z., Xu, C., Velten, J.P. 2006. Characterization of the arabidopsis thermosensitive mutant ATTS02 reveals an important role for galactolipids in thermotolerance. Plant Cell and Environment. 29(7):437-1448.

FTSH11 PROTEASE PLAYS A CRITICAL ROLE IN ARABIDOPSIS THERMOTOLERANCE - (Abstract)

Chen, J., Burke, J.J., Velten, J.P., Xin, Z. 2006. Ftsh11 protease plays a critical role in arabidopsis thermotolerance[abstract]. Keystone Symposia.

FTSH11 IS ESSENTIAL TO THERMOTOLERANCE IN ARABIDOPSIS - (Abstract)

Chen, J., Burke, J.J., Velten, J.P., Xin, Z. 2006. Ftsh11 is essential to thermotolerance in arabidopsis. Plant and Animal Genome Conference. P. 405 XIV Conference.

AIMS LIBRARY - A USEFULL RESOURCE FOR FUNCTIONAL SORGHUM GENOMICS - (Abstract)

Xin, Z., Franks, C.D., Burow, G.B., Burke, J.J. 2006. AIMS library - a usefull resource for functional sorghum genomics[abstract]. Plant and Animal Genome Conference. Paper 368.

CHARACTERIZATION OF SORGHUM WATER STRESSED LEAF TRANSCRIPTOME AND STAY GREEN EXPRESSION VIA EST ANALYSIS - (Abstract)

Burow, G.B., Mccartor, K.D., Zhang, D., Nguyen, H., Burke, J.J., Payton, P.R. 2006. Characterization of sorghum water stressed leaf transcriptome and stay green expression via est analysis [abstract]. Keystone Symposia. p 46.

A COMPARISON OF US AND CHINESE SORGHUM GERMPLASM FOR EARLY SEASON COLD TOELRANCE - (Peer Reviewed Journal)

Franks, C.D., Burow, G.B., Burke, J.J. 2006. A comparison of US and Chinese sorghum germplasm for early season cold tolerance. Crop Science. 46:1371-1376.

PROGRESS ON EARLY SEASON COLD TOLERANCE IN SORGHUM - (Proceedings/Symposium)

Burke, J.J., Burow, G.B., Franks, C.D. 2005. Progress on early season cold tolerance in sorghum[abstract]. American Seed Trade Association Conference Proceedings.

A SIMPLE AND COST-EFFECTIVE METHOD TO SCREEN FOR TRANSPIRATION EFFICIENCY IN SORGHUM - (Abstract)

Xin, Z., Franks, C.D., Burke, J.J. 2005. A simple and cost-effective method to screen for transpiration efficiency in sorghum [abstract]. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper No. 715A.

GENETIC ANALYSIS OF PHYSIOLOGICAL RESPONSES TO CHILLING STRESS IN SORGHUM - (Abstract)

Burow, G.B., Franks, C.D., Xin, Z., Burke, J.J. 2005. Genetic analysis of physiological responses to chilling stress in sorghum[abstract]. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper No. 742B.

BIOTIC: A BIOLOGICALLY-BASED PROTOCOL FOR IRRIGATION SCHEDULING - (Abstract)

Mahan, J.R., Wanjura, D.F., Upchurch, D.R., Burke, J.J. 2005. BIOTIC: a biologically-based protocol for irrigation scheduling[abstract]. InterDrought-II: The 2nd International Conference on Integrated Approaches to Sustain and Improve Plant Production Under Drought Stress. Paper No. 3.36.

ADAPTING THE BIOTIC PROTOCOL TO MANAGE WATER DEFICITS - (Abstract)

Wanjura, D.F., Mahan, J.R., Upchurch, D.R., Burke, J.J. 2005. Adapting the BIOTIC protocol to manage water deficits[abstract]. InterDrought-II: The 2nd International Conference on Integrated Approaches to Sustain and Improve Plant Production Under Drought Stress. Paper No. 3.74.

TOWARD SEQUENCING THE SORGHUM GENOME: A US NATIONAL SCIENCE FOUNDATION-SPONSORED WORKSHOP REPORT - (Peer Reviewed Journal)

Kresovich, S., Barbazuk, B., Bedell, J., Borrell, A., Buell, R., Burke, J.J., Clifton, S., Cordonnier-Pratt, M., Cox, S., Dahlberg, J., Erpelding, J.E., Fulton, T.M., Fulton, B., Fulton, L., Gingle, A., Goff, S., Hash, C., Huang, Y., Jordan, D., Klein, P., Klein, R.R., Magalhaes, J., McCombie, R., Moore, P.H., Mullet, J.E., Ozias-Akins, P., Paterson, A.H., Porter, K., Pratt, L., Roe, B., Rooney, W., Schnable, P., Steely, D.M., Tuinstra, M., Ware, D., Warek, U. 2005. Toward sequencing the sorghum genome: A US National Science Foundation-sponsored workshop report. Plant Physiology. 138(4):1898-1902.

CELLULAR AND MOLECULAR BASIS OF PLANT TOLERANCE TO HEAT STRESS - (Book/Chapter)

Burke, J.J., Chen, J. 2006. Cellular and molecular basis of plant tolerance to heat stress. In: Huang, B, editor. Plant-Environment Interactions. 3rd Edition. Boca Raton, FL: CRC Press. p. 27-46.

FUNCTIONAL CHARACTERIZATION OF THE GEMINIVIRAL CONSERVED LATE ELEMENT (CLE) IN UNINFECTED TOBACCO - (Peer Reviewed Journal)

Cazzonelli, C.I., Burke, J.J., Velten, J.P. 2005. Functional characterization of the geminiviral conserved late element (CLE) in uninfected tobacco. Plant Molecular Biology. 58(4):465-481.

MUTANT SCREEN AND TILLING WITH AIMS - (Abstract)

Xin, Z., Franks, C.D., Burow, G.B., Burke, J.J. 2005. Mutant screen and tilling with AIMS [abstract]. ASA-CSSA-SSSA Annual Meeting, February 20-24, 2005, Reno, Nevada.

CONCEPTS IN DEFICIT IRRIGATION: DEFINING A BASIS FOR EFFECTIVE MANAGEMENT - (Proceedings/Symposium)

Upchurch, D.R., Mahan, J.R., Wanjura, D.F., Burke, J.J. 2004. Concepts In Deficit Irrigation: Defining A Basis For Effective Management [abstract]. Environmental And Water Resources Institute World Congress Proceedings. Paper No. 9028.

A NEW BIOASSY TO DETERMINE THE ONSET OF WATER STRESS IN COTTON - (Abstract)

Burke, J.J. 2005. A new bioassy to determine the onset of water stress in cotton[ABSTRACT]. National Cotton Council Beltwide Cotton Conference.

CONCEPTS IN DEFICIT IRRIGATION: DEFINING A BASIS FOR EFFECTIVE MANAGEMENT - (Abstract)

Upchurch, D.R., Mahan, J.R., Wanjura, D.F., Burke, J.J. 2004. Concepts in deficit irrigation: defining a basis for effective management [abstract]. Environmental and Water Resources Institute World Congress Proceedings. Paper No. 9028.

VEGETATIVE AND REPRODUCTIVE STRESS TOLERANCE IN COTTON - (Abstract)

Burke, J.J., Percy, R.G. 2004. Vegetative and reproductive stress tolerance in cotton[abstract]. October 31-November 04, 2004, Seattle, Washington. American Society of Agronomy Meetings. 2004 CD-ROM.

GENETIC MAPPING OF ANTHOCYANIN REGULATORY GENES AND RESPONSES TO CHILLING STRESS IN SORGHUM - (Abstract)

Burow, G.B., Klein, P., Klein, R.R., Mullet, J., Franks, C.D., Burke, J.J. 2004. Genetic mapping of anthocyanin regulatory genes and responses to chilling stress in sorghum [abstract]. American Society of Plant Biology Annual Meeting. Abstract p. 245.

DEVELOPMENT OF PEANUT VARIETIES WITH DROUGHT AND HEAT TOLERANCE - (Abstract)

Wallace, J.R., Burke, J.J., Shurbert, A.M., Burow, M.D., Rowland, D., Ayers, J.L., Porter, D., Holbrook Jr, C.C. 2004. Development of peanut varieties with drought and heat tolerance[abstract]. American Peanut Research and Education Society Proceedings. Volume 36

MOLECULAR MAPPING OF ARABIDOPSIS GENES CONTRIBUTING TO THERMOTOLERANCE - (Abstract)

Burke, J.J., Chen, J., Xin, Z., Velten, J.P. 2004. Molecular mapping of arabidopsis genes contributing to thermotolerance [abstract]. Keystone Symposia.

A LOW COST HIGH EFFICIENT METHOD FOR GENETIC MAPPING USING INDEL MARKERS - (Abstract)

Xin, Z., Chen, J., Burke, J.J. 2004. A low cost high efficient method for genetic mapping using indel markers[abstract]. Plant and Animal Genome. Paper No. 227.

THE INFLUENCE OF VARIOUS DELINTING AND PRIMING TREATMENTS ON COTTON SEEDLING EMERGENCE, DEVELOPMENT AND YIELD - (Abstract)

McMichael, B.L., Burke, J.J., Hopper, N., Wedegaertner, T. 2004. The influence of various delinting and priming treatments on cotton seedling emergence, development and yield [abstract]. National Cotton Council Beltwide Cotton Conference, January 1-9, 2004, San Antonio, Texas. 2004 CDROM.

GENETIC VARIABILITY FOR EARLY SEASON ROOT SYSTEM DEVELOPMENT - (Proceedings/Symposium)

McMichael, B.L., Burke, J.J. 2003. Genetic variability for early season root system development. National Cotton Council Beltwide Cotton Conference. 2003. p. 1748

ASSESMENT OF BIOCHEMICAL FUNCTION IN ARABIDOPSIS MUTANTS DEFECTIVE IN ACQUIRED THERMOTOLERANCE - (Proceedings/Symposium)

Cazzonelli, C.I., Burke, J.J., Velten, J.P. 2004. Assesment of biochemical function in arabidopsis mutants defective in acquired thermotolerance. Keystone Symposia.

MAPPING QTL ASSOCIATED WITH EARLY-SEASON VIGOR AND COLD TOLERANCE IN SORGHUM - (Abstract)

Burke, J.J., Pandravada, A., Tuinstral, M.R., Kofoid, K.D., Aiken, R., Payne, W., Wysocki, D., Chen, C., Mullet, J.E. 2003. Mapping qtl associated with early-season vigor and cold tolerance in sorghum[abstract]. Agronomy Abstracts.

FINE MAPPING OF ARABIDOPSIS ACQUIRED THERMOTOLERANCE DEFICIENT MUTANTS - (Abstract)

Burke, J.J., Xin, Z., Velten, J.P. 2003. Fine mapping of arabidopsis acquired thermotolerance deficient mutants[abstract]. American Society of Plant Biologists Annual Meeting.

MAGNETIC RESONANCE IMAGING OF TEMPERATURE STRESSED COTTON ROOTS - (Proceedings/Symposium)

MCMICHAEL, B.L., MACFALL, J., BURKE, J.J. MAGNETIC RESONANCE IMAGING OF TEMPERATURE STRESSED COTTON ROOTS. Digital Imaging and Spectral Techniques: Application to Precision Agriculture. 2003.

A SIMPLE VERSATILE HIGH THROUPHPUT DNA EXTRACTION METHOD SUITABLE FOR PCR - (Abstract)

Xin, Z., Velten, J.P., Oliver, M.J., Burke, J.J. 2003. A simple versatile high throughput DNA extraction method suitable for PCR. American Society of Plant Biologists Annual Meeting. 34(4):820-826.

METABOLIC AND REPRODUCTIVE FITNESS OF HEAT-STRESSED COTTON - (Abstract)

Burke, J.J. 2003. Metabolic and reproductive fitness of heat-stressed cotton. National Cotton Council Beltwide Cotton Conference.

PHYSIOLOGICAL LIMITATIONS TO COTTON PRODUCTION ON THE HIGH PLAINS OF TEXAS - (Abstract)

Burke, J.J. Physiological limitations to cotton production on the High Plains of Texas. National Cotton Council Beltwide Cotton Conference[abstract]. 2003. P. 1652. CD-ROM File.

SPRINKLER-INDUCED FLOWER LOSSES AND YIELD REDUCTIONS IN COTTON - (Peer Reviewed Journal)

Burke, J.J. Sprinkler-induced flower losses and yield reductions in cotton. Agronomy Journal. 2003. V. 95, P. 709-714

COTTON POLLEN SENSITIVITY TO WATER - (Abstract) - (25-Apr-02)

A SIMPLE VERSATILE HIGH THROUGHPUT DNA EXTRACTION METHOD SUITABLE FOR PCR - (Peer Reviewed Journal)

XIN, Z., VELTEN, J.P., OLIVER, M.J., BURKE, J.J. A SIMPLE VERSATILE HIGH THROUGHPUT DNA EXTRACTION METHOD SUITABLE FOR PCR. BIOTECHNIQUES. 2002. Abstract 855.