CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. RPL35A, Ribosomal protein L35a
Sequence ID:NM_000996

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29-qterMitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 199163779 - 199166323

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140124Full LengthBC001037ribosomal protein L35a
3856562Full LengthBC017093ribosomal protein L35a
4107948Full LengthBC010949ribosomal protein L35a
5185135Full LengthBC061890ribosomal protein L35a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000987  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_000996 NP_000987 P18077 Ribosomal_L35Ae

Related Sequences

 
mRNAGenPeptSwissProt
BC001037 AAH01037 P18077
BC010949 AAH10949 P18077
BC017093 AAH17093 P18077
BC061890 AAH61890 P18077
AY871273 AAX11429 P18077
AB055768 BAB62862  
X52966 CAA37138 P18077

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL35A NP_000987 R.norvegicus Rpl35a 57809   NP_067087 99
M.musculus Rpl35a 57808 Gene Info NP_067313 99
M.musculus OTTMUSG00000021804 100042363 Gene Info XP_001478748 99
M.musculus OTTMUSG00000015055 100043423 Gene Info XP_001479993 99
M.musculus ENSMUSG00000067558 100040169 Gene Info XP_001474693 99
M.musculus ENSMUSG00000070519 100042824   XP_001479869 99
M.musculus ENSMUSG00000067575 100043341 Gene Info XP_001480314 99
A.gambiae AgaP_AGAP002754 1273216   XP_312171 66
D.melanogaster RpL35A 40654   NP_649539 63
C.elegans rpl-33 174166   NP_495468 60
N.crassa NCU09109.1 2713428   XP_331501 56
A.thaliana AT1G07070 837218   NP_172188 54
S.cerevisiae RPL33B 854409   NP_014877 54
M.grisea MGG_09927 2680897   XP_365082 52
S.pombe rpl33 2539518   NP_587864 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

Kegg Pathways
Pathway information courtesy of Kegg


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.