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Selected Publications for Center:

The Carolina Environmental Bioinformatics Research Center

Grant Number R832720


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  • Journal Article (10)
  • Reference Type Citation Progress Report Year Document Sources
    Journal Article Gatti D, Maki A, Chesler EJ, Kirova R, Kosyk O, Lu L, Manly KF, Williams RW, Perkins A, Langston MA, Threadgill DW, Rusyn I. Genome-level analysis of genetic regulation of liver gene expression networks. Hepatology 2007;46(2):548-557. R832720 (2007)
  • Abstract from PubMed
  • Full-text: InterScience Full Text
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  • Other: InterScience PDF
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  • Journal Article Graham MR, Virtaneva K, Porcella SF, Gardner DJ, Long RD, Welty DM, Barry WT, Johnson CA, Parkins LD, Wright FA, Musser JM. Analysis of the transcriptome of Group A Streptococcus in mouse soft tissue infection. American Journal of Pathology 2006;169(3):927-942. R832720 (2007)
  • Abstract from PubMed
  • Full-text: American Journal of Pathology Full Text
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  • Other: American Journal of Pathology PDF
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  • Journal Article Hu J, Wright FA, Zou F. Estimation of expression indexes for oligonucleotide arrays using the singular value decomposition. Journal of the American Statistical Association 2006;101(473):41-50. R832720 (2006)
    not available
    Journal Article Nadler JJ, Zou F, Huang H, Moy SS, Lauder J, Crawley JN, Threadgill DW, Wright FA, Magnuson TR. Large-scale gene expression differences across brain regions and inbred strains correlates with a behavioral phenotype. Genetics 2006;174(3):1229-1236. R832720 (2006)
    not available
    Journal Article Roberts A, Pardo-Manuel de Villena F, Wang W, McMillan L, Threadgill DW. The polymorphism architecture of mouse genetic resources elucidated using genome-wide resequencing data: implications for QTL discovery and systems genetics. Mammalian Genome 2007;18(6-7):473-481. R832720 (2007)
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  • Other: SpringerLink PDF
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  • Journal Article Tropsha A, Golbraikh A. Predictive QSAR modeling workflow, model applicability domains, and virtual screening. Current Pharmaceutical Design 2007;13(34):3494-3504. R832720 (2007)
  • Abstract from PubMed
  • Journal Article Woods CG, Vanden Heuvel JP, Rusyn I. Genomic profiling in nuclear receptor-mediated toxicity. Toxicologic Pathology 2007;35(4):474-494. R832720 (2007)
  • Abstract from PubMed
  • Other: Toxicologic Pathology PDF
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  • Journal Article Woods CG, Kosyk O, Bradford BU, Ross PK, Burns AM, Cunningham ML, Qu P, Ibrahim JG, Rusyn I. Time course investigation of PPARα-and Kupffer cell-dependent effects of WY-14,643 in mouse liver using microarray gene expression. Toxicology and Applied Pharmacology 2007;225(3):267-277. R832720 (2007)
  • Abstract from PubMed
  • Full-text: Science Direct Full Text
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  • Other: Science Direct PDF
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  • Journal Article Wright FA, Huang H, Guan X, Gamiel K, Jeffries C, Barry WT, Pardo-Manuel de Villena F, Sullivan PF, Wilhelmsen KC, Zou F. Simulating association studies: a data-based resampling method for candidate regions or whole genome scans. Bioinformatics 2007;23(19):2581-2588. R832720 (2007)
  • Abstract from PubMed
  • Full-text: Bioinformatics Full Text
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  • Other: Bioinformatics PDF
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  • Journal Article Zhu H, Rusyn I, Richard A, Tropsha A. The use of cell viability assay data improves the prediction accuracy of conventional quantitative structure activity relationship models of animal carcinogenicity. Environmental Health Perspectives 2008 Jan 4 [Epub ahead of print] doi:10.1289/ehp.10573. R832720 (2007)
  • Abstract: Environmental Health Perspectives Abstract
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  • Other: Environmental Health Perspectives PDF
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    The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Conclusions drawn by the principal investigators have not been reviewed by the Agency.


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