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CHECK HERE FOR DESCRIPTIONS OF NEWLY CHARACTERIZED MAIZE GENES!
With the overwhelming number of genes that are being discovered by phenotypic and sequence analyses, the MaizeGDB staff is missing some that should be included in MaizeGDB. We need your help! Please let us know about new genes that you're working on or have recently read about.
Below is a list of newly reported or newly characterized genes as well as some noteworthy ones (oldies but goodies) with which you may not yet be familiar. To suggest genes for inclusion in this list, email us and include the gene name, full name, chromosome or bin, and a recent reference.
If you cannot find the gene you would like to recommend in the database, send us an email so that we can add it to the database!
| Gene | Full Name | Chromosome
or Bin | Recent Reference | Cooperator | Date |
| ppr5 | chloroplast pentatricopeptide repeat protein | ? | Williams-Carrier R. et al. RNA. 2008 Sep;14(9):1930-42.
Beick S. et al. Mol Cell Biol. 2008 Sep;28(17): 5337-47. | Alice Barkan | November 17, 2008 |
| wtf1 | ? | ? | Paper submitted. | Alice Barkan | November 17, 2008 |
| ppr10 | pentatricopeptide repeat protein | ? | Paper submitted. | Alice Barkan | November 17, 2008 |
| spi1 | sparse inflorescence1 | ? | Gallavotti, A, et al. 2008. Proc Natl Acad Sci, USA. 0:Epub ahead of print | Lisa Harper | October 7, 2008 |
| mwp1 | milkweed pod1 | 7.02 | Candela, H et al. 2008. Plant Cell. Epub ahead of print | Mary Schaeffer | September 8, 2008 |
| sid1 | sister of indeterminate spikelet1 | ? | Chuck, G et al. 2008. Development. Epub ahead of print | Lisa Harper | September 2, 2008 |
| rif1 | R-interacting factor1 | ? | Hernandez, M. et al. 2008. Proc Nat Acad Sci U S A 104:17222-17227 | Edward Grow | March 28, 2008 |
| acpt1 | acyl carrier protein1 | 1.07 | Souciet, G and Weil, JH. 1992. Plant Sci 81:215-225 | Ed Coe | January 8, 2008 |
| amy5 | alpha amylase5 | 7.03 | Wang, S et al. 1997. Plant Physiol 113:403-409 | Ed Coe | January 8, 2008 |
| an2 | kaurene synthase2 | 1.04 | Harris, LJ, et al. 2005. Plant Mol Biol. 59:881-884 | Ed Coe | January 8, 2008 |
| apx2 | ascorbate peroxidase2 | 2.08 | Van Breusegem, F. et al. 1995. Plant Physiol 107:649-650 | Ed Coe | January 8, 2008 |
| bzip1 | bZIP transcription factor1 | 3.08 | Nieva, C, et al. 2005. Plant Mol Biol. 58:899-914 | Ed Coe | January 8, 2008 |
| cad1 | cinnamyl alcohol dehydrogenase1 | 2.02 | Morrison, TA; Buxton, DR. 1993. Crop Sci 33:1264-1268 | Ed Coe | January 8, 2008 |
| cka1 | CK2 protein kinase alpha1 | 1.10 | Riera, M et al. 2001. Molecular and Cellular Biochemistry 227:119-127 | Ed Coe | January 8, 2008 |
| cka2 | CK2 protein kinase alpha2 | 1.10 | Riera, M et al. 2001. Molecular and Cellular Biochemistry 227:119-127 | Ed Coe | January 8, 2008 |
| cka3 | CK2 protein kinase alpha3 | 7.00 | Riera, M et al. 2001. Plant J 25:365-374 | Ed Coe | January 8, 2008 |
| cka4 | CK2 protein kinase alpha4 | 7.00 | Riera, M et al. 2001. Plant J 25:365-374 | Ed Coe | January 8, 2008 |
| cko2 | cytokinin oxidase2 | 3.05 | Massonneau, A; Laloue, M. 2004. J Exp Bot. 55:2549-2557 | Ed Coe | January 8, 2008 |
| eif5 | eucaryotic translation initiation factor5 | 4.10 | Lopez Ribera, I and Puigdomenech, P. 1999. Gene 240:355-359 | Ed Coe | January 8, 2008 |
| eif7 | eucaryotic initiation factor7 | 5.03 | Manjunath, S et al. 1999. Plant J 19:21-30 | Ed Coe | January 8, 2008 |
| eng1 | endo-1,3-1,4-beta-D-glucanase1 | 4.05 | Thomas, B et al. 2000. Int J Biol Macromol 27: 145-149 | Ed Coe | January 8, 2008 |
| ers14 | enhancer of rough sheath14 | 5.02 | Gallie, DR; Young, T. 2004. Mol Genet Genomics. 271:267-281 | Ed Coe | January 8, 2008 |
| fad7 | fatty acid desaturase7 | 9.06 | Berberich, T et al. 1998. Plant Mol Biol 36:297-306 | Ed Coe | January 8, 2008 |
| ndk1 | nucleotide diphosphate kinase1 | 7.03 | Shen, B et al. 1994. Plant Mol Biol 26:1085-1101 | Ed Coe | January 8, 2008 |
| pcna2 | proliferating cell nuclear antigen2 | 4.07 | Lopez, I et al. 1997. Biochim Biophys Acta 1353:1-6 | Ed Coe | January 8, 2008 |
| serk2 | somatic embryogenesis receptor-like kinase2 | 5.05 | Baudino, S et al. 2001. Planta 213:1-10 | Ed Coe | January 8, 2008 |
| cyp10 | cytochrome P450 10 | 3.09 | none | Ed Coe | January 8, 2008 |
| der2 | derlin2 | 10.03 | Kirst, M; et al. 2005. Plant Physiol. 138:218-231 | Ed Coe | January 8, 2008 |
| gsh1 | gamma-glutamylcysteine synthetase1 | 6.01 | Gomez, LD, et al. 2004. Plant Physiol. 134:1662-1671 | Ed Coe | January 8, 2008 |
| lpa1 | low phytic acid1 | 1.02 | Shukla, S; Vantoai, TT; Pratt, RC. 2004. J Agric Food Chem. 52:4565-4570 | Ed Coe | January 8, 2008 |
| lpa2 | low phytic acid2 | 1.04-1.05 | Shi, J et al. 2003. Plant Physiol 131:507-515 | Ed Coe | January 8, 2008 |
| lrs1 | liguleless related sequence1 | 8.07 | Langham, RJ, et al. 2004. Genetics. 166:935-945 | Ed Coe | January 8, 2008 |
| mlo9 | barley mlo defense gene homolog9 | 2.01 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Ed Coe | January 8, 2008 |
| mop1 | mediator of paramutation1 | 2.04 | Parkinson, S; Gross, S; Hollick, J. 2007. Dev Biol. 308:462-473 | Ed Coe | January 8, 2008 |
| mtl2 | metallothionein2 | 1.05 | White, CN; Rivin, CJ. 1995. Plant Physiol 108:831-832 | Ed Coe | January 8, 2008 |
| nrx1 | nucleoredoxin1 | 1.04 | Laughner, BH et al. 1998. Plant Physiol 118:987-996 | Ed Coe | January 8, 2008 |
| pls1 | phospholipid synthesis1 | 4.01-4.02 | Brown, AP, et al. 1994. Plant Mol Biol 26:211-223 | Ed Coe | January 8, 2008 |
| tacs1 | terminal acidic SANT 1 | 2.08 | Marian, CO; Bass, HW. 2005. Biochim Biophys Acta. 14:81-86 | Ed Coe | January 8, 2008 |
| ugu1 | UTP-glucose-P-uridyltransferase homolog | 5.03 | none | Ed Coe | January 8, 2008 |
| ypt2 | ypt homolog2 | 5.06 | Fabry, S et al. 1992. Gene 118:153-162 | Ed Coe | January 8, 2008 |
| cg1 | corngrass1 | 3.02 | Chuck, G. et al. 2007. Nature Genetics. 39:544-9 | George Chuck | Sept. 25, 2007 |
| ts4 | tasselseed4 | 3.05 | Chuck, G. et al. 2007. Maize Genetics Conference Abstracts. 49:T32 | George Chuck | Sept. 25, 2007 |
| ts6 | tasselseed6 | 1.11 | Hake, S. et al. 2007. Maize Genetics Conference Abstracts. 49:Plen2 | George Chuck | Sept. 25, 2007 |
| der1 | derlin1 | 8.03 | Kirst, M. et al. 2005. Plant Physiol. 138:218-231 | Ed Coe | May 1, 2007 |
| drh1 | DEAD box RNA helicase1 | 3.05 | Gendra, E. et al. 2004. Plant J. 38:875-886 | Ed Coe | May 1, 2007 |
| lrk1 | Ser/Thr receptor-like kinase1 | 8.00-8.01 | Royo, J. et al. 2006. Planta 223: 1303-1314 | Ed Coe | May 1, 2007 |
| opr5 | 12-oxo-phytodienoic acid reductase5 | 2.04 | Zhang, J. et al. 2005. Plant Mol Biol. 59:323-343 | Ed Coe | May 1, 2007 |
| stk2 | serine-threonine kinase2 | 2.04 | Alleman, M. et al. 2006. Nature. 442:295-298 | Ed Coe | May 1, 2007 |
| czog2 | cis-zeatin O-glucosyltransferase2 | ? | Veach, C. et al. 2003. Plant Physiol 131: 1374-1380 | Marty Sachs | March 7, 2007 |
| gl8b | beta-ketoacyl reductase | 4.05 | Dietrich, C, et al. 2005. Plant J. 42:844-861 | Marty Sachs | March 7, 2007 |
| mlo1 | barley mlo defense gene homolog1 | 1.01 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| mlo2 | barley mlo defense gene homolog2 | 1.05 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| mlo3 | barley mlo defense gene homolog3 | 2.04 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| mlo4 | barley mlo defense gene homolog4 | 4.09 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| mlo5 | barley mlo defense gene homolog5 | 3.06 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| mlo6 | barley mlo defense gene homolog6 | 5.04-5.05 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| mlo7 | barley mlo defense gene homolog7 | 9.04 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| mlo8 | barley mlo defense gene homolog8 | 6.05 | Devoto, A et al. 2003. J Mol Evol 56: 77-88 | Marty Sachs | March 7, 2007 |
| orc2 | origin recognition complex2 | ? | Witmer, X et al. 2003. Nucl Acid Res 31:619-628 | Marty Sachs | March 7, 2007 |
| orc3 | origin recognition complex3 | ? | Witmer, X et al. 2003. Nucl Acid Res 31:619-628 | Marty Sachs | March 7, 2007 |
| orc4 | origin recognition complex4 | ? | Witmer, X et al. 2003. Nucl Acid Res 31:619-628 | Marty Sachs | March 7, 2007 |
| orc5 | origin recognition complex5 | ? | Witmer, X et al. 2003. Nucl Acid Res 31:619-628 | Marty Sachs | March 7, 2007 |
| rab2a | Ras-related protein Rab-2-A | 2.04 | Laughner, BH and Ferl, RJ. 1997. MNL 71:36 | Marty Sachs | March 7, 2007 |
| sig1A | sigma factor 1A | ? | Beardslee, T et al. 2002. Plant J 31:199-209 | Marty Sachs | March 7, 2007 |
| sig1B | sigma factor 1B | ? | Beardslee, T et al. 2002. Plant J 31:199-209 | Marty Sachs | March 7, 2007 |
| vp15 | viviparous15 | ? | Suzuki, M et al. 2006. Plant J 45: 264-274 | Marty Sachs | March 7, 2007 |
| yab9 | yabby9 | ? | Juarez, MT et al. 2004. Development. 131:4533-4544 | Marty Sachs | March 7, 2007 |
| yab10 | yabby10 | 1.07 | Juarez, MT et al. 2004. Development. 131:4533-4544 | Marty Sachs | March 7, 2007 |
| yab14 | yabby14 | ? | Juarez, MT et al. 2004. Development. 131:4533-4544 | Marty Sachs | March 7, 2007 |
| tak1 | Triticum aestivum kinase1 | 8 | Feuillet, C. 1999. Proc Natl Acad Sci, USA 96: 8265-8270 | Ed Coe | January 25, 2007 |
| mus3 | mismatch binding protein Mus3 | 7.02 | Franklin, A; Cande, WZ. 2000. Unpublished submission to GenBank | Ed Coe | January 25, 2007 |
| scro1 | SCARECROW1 | 4.08 | Lim, J et al. 2000. Plant Cell 12:1307-1318 | Ed Coe | January 25, 2007 |
| sig6 | sigma-like factor6 | 5 | Beardslee, T et al. 2002. Plant J 31:199-209 | Ed Coe | January 25, 2007 |
| yy1 | yin-yang1 | 5.04 | Xu, T et al. 2001. Proc Natl Acad Sci, USA 98:2295-2300 | Ed Coe | January 25, 2007 |
| zmk1 | potassium channel1 | 8.05 | Philippar, K et al. 2006. Plant Mol Biol 61: 757-768 | Ed Coe | January 25, 2007 |
| ckb1 | CK2 regulatory subunit B1 | 2.03 | Riera, M et al. 2001. Plant J 25:365-374 | Ed Coe | January 25, 2007 |
| sig2B | sigma-like factor2B | 1.03 | Beardslee, T et al. 2002. Plant J 31:199-209 | Ed Coe | January 25, 2007 |
| rws1 | RNA recognition water-stress protein1 | 2.03 | Mu, RL et al. 2002. Unpublished submission to GenBank | Ed Coe | January 25, 2007 |
| vacs1 | vacuolar sorting receptor homolog1 | 9.04 | Paris, N et al. 1997. Plant Physiol 115:29-39 | Ed Coe | January 25, 2007 |
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Last updated 12:57 pm, Nov 17, 2008.
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