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Center for Coastal & Watershed Studies

Integrated Remote Sensing and Modeling Group

Reef Models

Investigating Benthic Habitats in Florida Reef Tract with LIDAR

The topographic variability of reef substrates and the composite three-dimensional thicket structure of their variable benthic communities are morphologic components of habitat complexity. The NASA Experimental Advanced Airborne Research Lidar (EAARL) is designed to survey these components of habitat complexity simultaneously at high horizontal (< 1 m) and vertical spatial resolution (< 0.2 m). In early August 2002, an intensive USGS - NASA EAARL survey was conducted over a broad swath of the northern Florida reef tract, extending from north of Triumph Reef to south of Carysfort Reef. Algorithms were developed to analyze the one-nanosecond temporal-resolution laser reflections that are provided at rates up to 5000 Hz by the NASA EAARL. Two highly complementary types of information on benthic morphologic complexity were extracted from the EAARL active optical soundings acquired over the northern Florida reef tract: 1) substrate optical rugosity, and 2) the range-amplitude characteristics of the laser bottom reflections. These two measurements are used to quantify the instantaneous vertical thicket structure of the benthic community. Optical rugosity was determined by converting each across-track lidar raster scan into a submarine topographic transect, followed by computing the ratio of surface contour length to direct geometric length along each transect. The time-amplitude reflection history of each laser-pulse bottom reflection was converted to a range-backscatter record and normalized for attenuation using water-column thickness derived from the full laser reflection. Bottom-reflection metrics, including total reflection length, integrated backscatter, and weighted-mean backscatter, were calculated for each optical sounding. The validity of these bottom-reflection metrics as proxies for the thicket density and height of branching or leafy organisms is being evaluated through the detailed in-situ measurement of patch-reef communities surveyed by the EAARL.

Description of the method used to derive lidar rugosity   Results showing a clear difference in the topographic roughness on Bank Reefs compared to Patch Reefs
Lidar-based rugosity analysis at Biscayne National Park. Above Left: Description of the method used to derive lidar rugosity [larger version]. Above right: Results showing a clear difference in the topographic roughness on Bank Reefs compared to Patch Reefs [larger version].

Advanced Methods:

-- ATRIS - Boat-Mounted, Georeferenced, Digital Imaging System

-- DEEP ATRIS - Auto-adjusting, Towed, Digital Imaging System

-- EAARL: Experimental Advanced Airborne Research LIDAR

-- LIDAR Processing Systems

-- Google Earth Applications

Reef Models:

-- Coral Reef Applications of Airborne LIDAR and Digital Camera Surveys

-- NASA-USGS-NPS EAARL Airborne Lidar Survey of the Dry Tortugas in August 2004

-- Investigating Benthic Habitats in Florida Reef Tract with LIDAR

Decision Support:

-- Introduction to Natural Resource Management Applications of Airborne Lidar Surveys

-- A GIS Application Example- National Park Service Inventory and Monitoring for Natural Resource Management

-- Deriving Vegetation Metrics Using Lidar

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