Estuarine Contamination from Varied Human Influences — San Francisco Bay and Delta, California

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Suoma, S.N., Clements, W., DeWitt, T., Gerritsen, J., Hatch, A., Jepson, P., Reynoldson, T., and Thom, R., 2001,

Separating stressor influences from environmental variability--Eight case studies from aquatic and terrestrial ecosystems, in Baird, D.J., and Burton, G.A., eds., Ecological Variability--Separating Natural from Anthropogenic Causes of Ecosystem Impairment: Pensacola, SETAC Press, p. 179-214.

Teh, S.J., Clark, S.L., Brown, C.L., Luoma, S.N., and Hinton, D.E., 1999,

Enzymatic and histopathologic biomarkers as indicators of contaminant exposure and effect in Asian clam (Potamocorbula amurensis): Biomarkers, v. 4, no. 6, p. 497-509, doi:10.1080/135475099230660.

Thompson, B., Adelsbach, T., Brown, C., Hunt, J., Kuwabara, J., Neale, J., Ohlendorf, H., Schwarzbach, S., Spies, R., and Taberski, K., 2007,

Biological effects of anthropogenic contaminants in the San Francisco Estuary: Environmental Research, v. 105, no. 1, p. 156-174, doi:10.1016/j.envres.2006.10.005.

Thompson, J.K., 2005,

One estuary, one invasion, two responses--Phytoplankton and benthic community dynamics determine the effect of an estuarine invasive suspension-feeder, in Dame, R.F., and Olenin, S., eds., Comparative roles of suspension-feeders in ecosystems: The Netherlands, Springer Press, p. 291-316, ISBN:978-1-4020-3028-4.

Thompson, J.K., 2002,

The evolving benthic community, in Science and Strategies for Restoration--San Francisco Bay Sacramento-San Joaquin River Delta Estuary: San Francisco Estuary Project and CALFED, p. 66-67.

Thompson, J.K., 1999,

The effect of infaunal bivalve grazing on phytoplankton bloom development in South San Francisco Bay: Stanford, Calif., Stanford University, Department of Civil and Environmental Engineering, Ph.D. Thesis, 419 p.

Thompson, J.K., Parchaso, F., and Shouse, M.K., 2002,

Near field receiving water monitoring of the benthic community near the Palo Alto water quality control plant in south San Francisco Bay--February 1974 through December 2000: U.S. Geological Survey Open-File Report 02-394, 117 p.

Thomson, E.A., Luoma, S.N., Johansson, C.E., and Cain, D.J., 1984,

Comparison of sediments and organisms in identifying sources of biologically available trace metal contamination: Water Resources, v. 18, no. 6, p. 755-765.

Thomson-Becker, E.A., and Luoma, S.N., 1985,

Temporal fluctuations in grain size, organic materials and iron concentrations in intertidal surface sediment of San Francisco Bay: Hydrobiologia, v. 129, p. 91-107.

Topping, B.R., and Kuwabara, J.S., 2003,

Dissolved nickel and benthic flux in south San Francisco Bay: A potential for natural sources to dominate: Bulletin of Environmental Contamination and Toxicology, v. 71, no. 1, p. 46-51, doi:10.1007/s00128-003-0129-7.

Topping, B.R., and Kuwabara, J.S., 1999,

Flow-injection - ICP-MS method applied to benthic flux studies of San Francisco Bay, in Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999--Volume 2 of 3--Contamination of Hydrologic Systems and Related Ecosystems: U.S. Geological Survey Water-Resources Investigations Report 99-4018B, p. 131-134.

Topping, B.R., Kuwabara, J.S., Marvin-DiPasquale, M.C., Agee, J.L., Kieu, L.H., Flanders, J.R., Parchaso, F., Hager, S.W., Lopez, C.B., and Krabbenhoft, D.P., 2004,

Sediment remobilization of mercury in south San Francisco Bay, California: U.S. Geological Survey Scientific Investigations Report 2004-5196, 57 p.

Topping, B.R., Kuwabara, J.S., Parchaso, F., Hager, S.W., Arnsberg, A.J., and Murphy, F., 2001,

Benthic flux of dissolved nickel into the water column of South San Francisco Bay: U.S. Geological Survey Open-File Report 01-89, 50 p.

U.S. Geological Survey, 2002,

Concepts for national assessment of water availability and use (Report to Congress): U.S. Geological Survey Circular 1223, 34 p.

U.S. Geological Survey, and California Bay Delta Authority, 2003,

Delta revival--restoring a California ecosystem: U.S. Geological Survey Open-File Report 03-358, DVD p.

Uncles, R.J., and Peterson, D.H., 1996,

Modeling the long-term salinity field in San Francisco Bay: Continental Shelf Research, v. 16, p. 2005-2039.

Uncles, R.J., and Peterson, D.H., 1995,

A computer model of long-term salinity in San Francisco Bay--Sensitivity to mixing and inflows: Environmental International, v. 21, no. 5, p. 647-656.

Uncles, R.J., Stephens, J.A., and Smith, R.E., 2002,

The dependence of estuarine turbidity on tidal intrusion length, tidal range and residence time: Continental Shelf Research, v. 22, no. 11-13, p. 1385-1856, doi:10.1016/S0278-4343(02)00041-9.

van Geen, A., and Husby, D.M., 1996,

Cadmium in the California current system--Tracer of past and present upwelling: Journal of Geophysical Research, v. 101:C2, p. 3489-3507.

van Geen, A., and Luoma, S.N., 1999,

The impact of human activities on sediments of San Francisco Bay, California--An overview, in The impact of human activities on sediments of San Francisco Bay, California, Van Geen, A., and Luoma, S.N., eds.: Marine Chemistry, v. 64, no. 1-2, p. 1-6, doi:10.1016/S0304-4203(98)00080-2.

van Geen, A., and Luoma, S.N., 1999,

A record of estuarine water contamination from the Cd content of foraminiferal tests in San Francisco Bay, California, in The impact of human activities on sediments of San Francisco Bay, California, van Geen, A., and Louma, S.N., eds.,: Marine Chemistry, v. 64, no. 1-2, p. 57-69, doi:10.1016/S0304-4203(98)00084-X.

van Geen, A., and Luoma, S.N., 1993,

Trace metals Cd, Cu, Ni, Zn, and nutrients in coastal waters adjacent to San Francisco Bay, California: Estuaries, v. 16, no. 3A, p. 559-566.

van Geen, A., Valette-Silver, N.J., Luoma, S.N., Fuller, C.C., Baskaran, M., Tera, F., and Klein, J., 1999,

Constraints on the sedimentation history of San Francisco Bay from 14C and 10Be, in The impact of human activities on sediments of San Francisco Bay, California, van Geen, A., and Luoma, S.N., eds.,: Marine Chemistry, v. 64, no. 1-2, p. 29-38, doi:10.1016/S0304-4203(98)00082-6.

Venkatesan, M.I., de Leon, R.P., van Geen, A., and Luoma, S.N., 1999,

Chlorinated hydrocarbon pesticides and polychlorinated biphenyls in sediment cores from San Francisco Bay, in The impact of human activities on sediments of San Francisco Bay, California, van Geen, A., and Luoma, S.N., eds.,: Marine Chemistry, v. 64, no. 1-2, p. 85-97, doi:10.1016/S0304-4203(98)90086-X.

Wallace, W.G., Lee, B.G., and Luoma, S.N., 2003,

Subcellular compartmentalization of Cd and Zn in two bivalves, I--Significance of metal-sensitive fractions (MSF) and biologically detoxified metal (BDM): Marine Ecology Progress Series, v. 249, p. 183-197, doi:10.3354/meps249183.

Wallace, W.G., and Luoma, S.N., 2003,

Subcellular compartmentalization of Cd and Zn in two bivalves, II--Significance of tropically available metal (TAM): Marine Ecology Progress Series, v. 257, p. 125-137, doi:10.3354/meps257125.

Wang, P.F., Cheng, R.T., Richter, K., Gross, E.S., and Gartner, J.W., 1998,

Modeling tidal hydrodynamics of San Diego Bay, California: Journal of the American Water Resources Association, v. 34, no. 5, p. 1123-1140, doi:10.1111/j.1752-1688.1998.tb04159.x.

Wang, W.-X., Fisher, N.S., and Luoma, S.N., 1996,

Kinetic determinations of trace element bioaccumulation in the mussel Mytilus edulis: Marine Ecology Progress Series, v. 140, no. 1-3, p. 91-113, doi:10.3354/meps140091.

Wang, W.-X., Fisher, N.S., and Luoma, S.N., 1995,

Assimilation of trace elements ingested by the mussel Mytilus edulis--Effects of algal food abundance: Marine Ecology Progress Series, v. 129, no. 1-3, p. 165-176, doi:10.3354/meps129165.

Wankel, S.D., Kendall, C., Francis, C.A., and Paytan, A., 2006,

Nitrogen sources and cycling in the San Francisco Bay estuary--A nitrate dual isotopic composition approach: Limnology and Oceanography, v. 51, no. 4, p. 1654-1664 (Abstract).

Wienke, S.M., Cole, B.E., Cloern, J.E., and Alpine, A.E., 1993,

Plankton studies in San Francisco Bay--XIV. Chlorophyll distributions and hydrographic properties in San Francisco Bay, 1992: U.S. Geological Survey Open-File Report 93-423, 175 p.

Wood, T.M., Baptista, A.M., Kuwabara, J.S., and Flegal, A.R., 1995,

Diagnostic modeling of trace metal partitioning in South San Francisco Bay: Limnology and Oceanography, v. 40, no. 2, p. 345-358.

Yoo, H., Lee, J.-S., Lee, B.-G., Lee, I.-T., Schlekat, C.E., Koh, D.-H., and Luoma, S.N., 2004,

Uptake pathway for Ag bioaccumulation in three benthic invertebrates exposed to contaminated sediments: Marine Ecology Progress Series, v. 270, p. 141-152, doi:10.3354/meps270141.

Zehr, J.P., Harvey, R.W., Oremland, R.S., Cloern, J.E., George, L., and Lane, J.L., 1987,

Big Soda Lake (Nevada) - 1. Pelagic bacterial heterotrophy and biomass: Limnology and Oceanography, v. 32, p. 781-793.

Zheng, Y., Anderson, R.F., van Geen, A., and Kuwabara, J., 2000,

Authigenic molybdenum formation in marine sediments--A link to pore water sulfide in the Santa Barbara Basin: Geochimica et Cosmochimica Acta, v. 64, no. 24, p. 4165-4178, doi:10.1016/S0016-7037(00)00495-6.

There are 408 publications in this section of the bibliography. The above list is sorted by author. The Toxics Bibliographic Data Base was last updated on 5/15/08.

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