Projects

DEVELOPMENT AND CHARACTERIZATION OF GENETIC RESOURCES FOR AGRONOMIC AND QUALITY TRAITS USING GENOMIC TOOLS Appropriated (D)   Accession Number: 413326

RESPONSE OF DIVERSE RICE GERMPLASM TO BIOTIC AND ABIOTIC STRESSES Appropriated (D)   Accession Number: 413322

DEVELOPMENT AND CHARACTERIZATION OF GENETIC RESOURCES FOR AGRONOMIC AND QUALITY TRAITS USING GENOMIC TOOLS Appropriated (D)   Accession Number: 413350

RESPONSE OF DIVERSE RICE GERMPLASM TO BIOTIC AND ABIOTIC STRESSES Appropriated (D)   Accession Number: 413193

PUERTO RICO NURSERY Nonfunded Cooperative Agreement (N)   Accession Number: 408323

PUERTO RICO NURSERY Specific Cooperative Agreement (S)   Accession Number: 410453

EVALUATION OF RICE GERMPLASM FOR RESISTANCE TO COMMON DISEASES OF RICE FOUND IN THE SOUTHERN U.S. Specific Cooperative Agreement (S)   Accession Number: 411765

IDENTIFICATION OF QTLS ASSOCIATED WITH SHEATH BLIGHT RESISTANCE GENES IN RICE Specific Cooperative Agreement (S)   Accession Number: 409905

A COORDINATED RESEARCH, EDUCATION, AND EXTENSION PROJECT FOR THE APPLICATION OF GENOMIC DISCOVERIES TO IMPROVE RICE IN THE UNITED STATES Trust (T)   Accession Number: 409318

Publications

Development of the recombinant inbred line population of tropical japonica Lemont crossed with indica Jasmine 85 - (Proceedings/Symposium)

Jia, Y., Liu, G., McClung, A.M. 2008. Development of the recombinant inbred line population of tropical japonica Lemont crossed with indica Jasmine 85. American Phytopathology Society 98:S75.

Genetic mapping of sheath blight resistance to QTLs within tropical Japonica rice cultivars - (Peer Reviewed Journal) - (11-Jul-08)

Fingerprinting a purified collection of 400 rice accessions from a diverse background - (Abstract)

Eizenga, G.C., Ali, M., Kimball, J., Mccouch, S.R., McClung, A.M. 2008. Fingerprinting a purified collection of 400 rice accessions from a diverse background. [abstract] American Society of Agronomy Abstracts. Houston, TX, Oct. 5-9, 2008. CDROM

Identification of quantitative trait loci (QTLs) responsible for sheath blight resistance in rice using recombinant inbred line population of Lemont X Jasmine 85 - (Proceedings/Symposium) - (05-Jul-08)

RiceCAP: Mapping rice milling yield QTL in a U.S. long grain cross - (Abstract)

McClung, A.M., Fjellstrom, R.G., Oard, J.H., Linscombe, S.D., Moldenhauer, K.K., Jodari, F., Lacaze, X., Leong, S.A., Nguyen, H., Wang, G., Nelson, J. 2008. RiceCAP: Mapping rice milling yield QTL in a U.S. long grain cross. [abstract] American Society of Agronomy Abstracts. p. 655-3.

Marker associations with starch paste viscosity profiles in rice independent of apparent amylose content - (Abstract)

Mcclung, A.M., Fjellstrom, R.G., Traore, K. 2008. Marker associations with starch paste viscosity profiles in rice independent of apparent amylose content. [abstract] American Society of Agronomy Abstracts. p. 656-7.

Genetic diversity and relationships assessed by SSRs in the USDA Rice Germplasm Collection - (Abstract)

Agrama, H., Yan, W., Fjellstrom, R.G., Jia, M.H., McClung, A.M. 2008. Genetic diversity and relationships assessed by SSRs in the USDA Rice Germplasm Collection. American Society of Agronomy Abstracts. p. 552-5.

Mining novel genes resistant to blast disease for US rice production - (Abstract)

Yan, W., Correll, J., Agrama, H., Scheffler, B.E., Fjellstrom, R.G., McClung, A.M. 2008. Mining novel genes resistant to blast disease for US rice production. American Society of Agronomy Abstracts. p. 551-8.

Differentiation of rice cultivar for grain arsenic content associated with soil and water management in rice - (Abstract) - (03-Jun-08)

Differential response of cultivated and weedy (red) rice to recent and projected increases in atmospheric carbon dioxide - (Peer Reviewed Journal)

Ziska, L.H., Mcclung, A.M. 2008. Differential response of cultivated and weedy (red) rice to recent and projected increases in atmospheric carbon dioxide. Agronomy Journal. 100(5):1259-1263.

Forty eight years of rice improvement in Texas since the release of cultivar Bluebonnet in 1944 - (Peer Reviewed Journal) - (26-May-08)

Use of gross income as a measure of productivity in rice breeding - (Peer Reviewed Journal)

Samonte, S.B., Wilson, L.T., Tabien, R.E., McClung, A.M. 2008. Use of gross income as a measure of productivity in rice breeding. Canadian Journal of Plant Science.

Development of a mini-core subset from the USDA Rice Core Collection - (Proceedings/Symposium)

Agrama, H., Yan, W., Fjellstrom, R.G., McClung, A.M. 2008. Development of a mini-core subset from the USDA Rice Core Collection. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Genetic variability in arsenic concentration and speciation in rice grain - (Proceedings/Symposium)

Loeppert, R.H., Raghvan, T., Yan, W., Agrama, H.A., McClung, A.M., James, W.D., Gentry, T.J. 2008. Genetic variability in arsenic concentration and speciation in rice grain. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Effect of Nitrogen Application and Crop Rotation on Rice Grain Quality - (Proceedings/Symposium)

Bryant, R.J., Anders, M.M., McClung, A.M. 2008. Effect of nitrogen application and crop rotation on rice grain quality. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Molecular Characterization of the Recombinant Inbred Line Population of the Cross of Lemont with Jasmine 85 - (Proceedings/Symposium)

Liu, G., Jia, Y., Jia, M.H., McClung, A.M., Correll, J.C. 2008. Molecular characterization of the recombinant inbred line population of the cross of Lemont with Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Genetic Dissection of Transgressive Flowering Time QTL dth1.1 - (Proceedings/Symposium)

Maas, L.F., Ravenscroft, D., Poleczwak, L., McClung, A.M., McCouch, S.R. 2008. Genetic dissection of transgressive flowering time QTL dth1.1. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.Proceedings.

Analysis of Plant Traits in Rice Sub-populations and O. rufipogon - (Proceedings/Symposium)

Eizenga, G.C., Ali, M.L., McCouch, S.R., McClung, A.M. 2008. Analysis of plant traits in rice sub-populations and O. rufipogon. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Identification of Sheath Blight Resistance QTLs in Rice Using Recombinant Inbred Line Population of Lemont X Jasmine 85 - (Proceedings/Symposium)

Liu, G., Jia, Y., Correa, F., Jia, M.H., McClung, A.M., Groth, D., Correll, J.C., Rutger, J.N. 2008. Identification of sheath blight resistance QTLs in rice using recombinant inbred line population of Lemont X Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Characterization of the USDA Rice World Genebank usng a core collection strategy - (Proceedings/Symposium)

Yan, W., Agrama, H., Fjellstrom, R.G., Bryant, R.J., McClung, A.M. 2008. Characterization of the USDA Rice World Genebank using a core collection strategy. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Enhancement of Yield Using Chromosomal Introgressions from Oryza rufipogon - (Proceedings/Symposium)

Mcclung, A.M., Moon, A.M., Eizenga, G.C., Mccouch, S.R. 2008. Enhancement of Yield Using Chromosomal Introgressions from Oryza rufipogon. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Mapping QTL for milling yield and grain characteristics in a tropical japonica long grain cross - (Peer Reviewed Journal)

Kepiro, J.L., McClung, A.M., Chen, M., Yeater, K.M., Fjellstrom, R.G. 2008. Mapping QTL for milling yield and grain characteristics in a tropical japonica long grain cross. Journal of Cereal Science 48:477-485.

Analysis of Plant Traits in Rice Sub-populations and O. rufipogon - (Proceedings/Symposium)

Eizenga, G.C., Ali, M.L., McCouch, S.R., McClung, A.M. 2008. Analysis of plant traits in rice sub-populations and O. rufipogon. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.

Analysis of an SFP marker in the Rice fgr/BAD2 gene and fragrance in US rice germplasm - (Abstract)

Fjellstrom, R.G., Mcclung, A.M., Chen, M.H., Bockelman, H.E., Yan, W. 2007. Analysis of an SFP marker in the Rice fgr/BAD2 gene and fragrance in US rice germplasm. [abstract] American Society of Agronomy Abstracts. p. 259-3.

Resistance to rice grain fissuring: Improving breeding selection techniques and identifying physical, chemical, and genetic factors underlying fissure resistance - (Proceedings/Symposium)

Pinson, S.R., Osborn, G.S., Thomas, A.E., Mcclung, A.M. 2007. Resistance to rice grain fissuring: Improving breeding selection techniques and identifying physical, chemical, and genetic factors underlying fissure resistance. United States Japan Natural Resources Protein Panel 36:227-231.

Using Genetic Markers to Track the Origin, Distribution, and Renaissance of Carolina Gold Rice - (Abstract)

Mcclung, A.M. 2007. Using Genetic Markers to Track the Origin, Distribution, and Renaissance of Carolina Gold Rice. [abstract] American Society of Agronomy Abstracts, New Orleans, LA, November 4-8, 2007. p. 79-6.

Development and characterization of RiceCAP QTL mapping population for sheath blight resistance - (Abstract)

Mcclung, A.M., Groth, D., Oard, J.H., Utomo, H., Moldenhauer, K.K., Boza, E., Scheffler, B.E., Jia, Y., Liu, G., Correa, F., Fjellstrom, R.G. 2007. Development and characterization of RiceCAP QTL mapping population for sheath blight resistance. [abstract] American Society of Agronomy Abstracts. p. 259-4.

Validation of mixed model-regression procedure for association genetics in rice - (Abstract)

Mcclung, A.M., Tai, T., Linscombe, S.D., Moldenhauer, K.K., Kanter, D., Beighley, D., Ordonez, Jr., S.A. 2007. Validation of mixed model-regression procedure for association genetics in rice. [abstract] American Society of Agronomy Abstracts. p. 259-5.

Variation in plant and seed traits found in a diverse collection of rice accessions - (Abstract)

Eizenga, G.C., Mccouch, S.R., Mcclung, A.M. 2007. Variation in plant and seed traits found in a diverse collection of rice accessions. [abstract] American Society of Agronomy Abstracts, New Orleans, LA, November 4-8, 2007. p. 279-15.

Comprehensive description for newly introduced accessions in the USDA rice germplasm collection - (Abstract)

Yan, W., Agrama, H., Mcclung, A.M., Chen, M.H., Bryant, R.J., Bockelman, H.E. 2007. Comprehensive description for newly introduced accessions in the USDA rice germplasm collection. [abstract] American Society of Agronomy Abstracts. p. 277-5.

Genetic dissection of rice flowering time QTL and epistatic interaction of candidate gene loci - (Abstract)

Maas, L.F., Mccouch, S.R., Polewczak, L.A., Mcclung, A.M. 2007. Genetic dissection of rice flowering time QTL and epistatic interaction of candidate gene loci. [abstract] American Society of Agronomy Abstracts, New Orleans, LA, November 4-8, 2007. p. 158-2.

Comprehensive description for newly introduced accessions in the USDA rice germplasm collection - (Abstract) - (08-Aug-07)

Descriptor associations in the USDA rice (Oryza sativa L.) germplasm collection and a core subset - (Abstract)

Agrama, H.A., Yan, W., Chen, M.H., Mcclung, A.M. 2007. Descriptor associations in the USDA rice (Oryza sativa L.) germplasm collection and a core subset. [abstract] American Society of Agronomy, New Orleans, LA, November 4-8, 2007. p. 279-14.

Analysis of an SFP marker in the rice fgr/BAD2 gene and fragrance in US rice germplasm - (Abstract)

Fjellstrom, R.G., McClung, A.M., Chen, M.H., Bockelman, H.E., Yan, W. 2007. Analysis of an SFP marker in the rice fgr/BAD2 gene and fragrance in US rice germplasm. [abstract] American Society of Agronomy Abstracts. p. 259-3.

Influence of Water to Rice Ratio on Cooked Rice Flavor and Texture. - (Peer Reviewed Journal)

Bett Garber, K.L., Champagne, E.T., Ingram, D.A., Mcclung, A.M. 2007. Influence of water to rice ratio on cooked rice flavor and texture. Cereal Chemistry. 84(6):614-619.

A new micro-chamber method for selecting sheath blight tolerant rice - (Experiment Station)

Pinson, S.R., Fjellstrom, R.G., Tabien, R.E., Mcclung, A.M., Wang, Y. 2007. A new micro-chamber method for selecting sheath blight tolerant rice. Experiment Station Bulletins. http://beaumont.tamu.edu/eLibrary/Newsletter/2007_Highlights_in_Research.pdf. pp.IX-XI.

RiceCAP: Development of molecular markers associated with long grain milling yield - (Abstract)

Mcclung, A.M., Boza, E., Fjellstrom, R.G., Guo, Z., Jodari, F., Linscombe, S.D., Moldenhauer, K.K., Nelson, J., Oard, J., Scheffler, B.E., Sun, X. 2007. RiceCAP: Development of molecular markers associated with long grain milling yield. Cereal Foods World 52:A5.

Development of rice materials for studying the genomics of disease resistance - (Proceedings/Symposium)

Jia, Y., Lin, M.J., Liu, G., Mcclung, A.M. 2007. Development of rice materials for studying the genomics of disease resistance. [abstract] American Phytopathology Society, 97:S52.

AFLP markers linked with long grain milling yield - (Other)

Kepiro, J.L., Fjellstrom, R.G., Mcclung, A.M. 2007. Aflp markers linked with long grain milling yield. RiceCAP News: http://www.uark.edu/ua/ricecap/Communication/newsletters/RiceCAPv3n7_Apr07.pdf. pp. 4-6.

Effects of Organic Fertility Management on Physicochemical Properties and Sensory Quality of Diverse Rice Cultivars. - (Peer Reviewed Journal)

Champagne, E.T., Bett Garber, K.L., Mcclung, A.M., Grimm, C.C. 2007. Effects of organic fertility management on physicochemical properties and sensory quality of diverse rice cultivars. Cereal Chemistry. 84(4):320-327.

THROUGH THE GENETIC BOTTLENECK: O. RUFIPOGON AS A SOURCE OF TRAIT-ENHANCING ALLELES FOR O. SATIVA - (Review Article)

Mccouch, S.R., Sweeney, M., Li, J., Jiang, H., Thompson, M., Septiningsih, E., Edwards, J., Moncada, P., Xiao, J., Garris, A.J., Tai, T., Martinez, C., Tohme, J., Sugiono, M., Mcclung, A.M., Yuan, L., Anh, S. 2007. Through the genetic bottleneck: o. rufipogon as a source of trait-enhancing alleles for o. sativa. Euphytica:154:317-339.

Rapid Determination of Rice Cultivar Responses to the Sheath Blight Pathogen Rhizoctonia solani Using a Micro-Chamber Screening Method - (Peer Reviewed Journal)

Jia, Y., Coarrea-Victoria, F., McClung, A.M., Zhu, L., Liu, G., Wamishe, Y., Xie, J., Marchetti, M.A., Pinson, S.R., Rutger, J.N., Correll, J.C. 2006. Rapid determination of rice cultivar responses to the sheath blight pathogen Rhizoctonia solani using a micro-chamber screening method. Plant Disease. 91:485-489.

Development and evaluation of a core subset of the USDA rice (Oryza sativa L.) germplasm collection - (Peer Reviewed Journal)

Yan, W., Rutger, J.N., Bockelman, H.E., Fjellstrom, R.G., Chen, M.H., Tai, T., McClung, A.M. 2007. Development and evaluation of a core subset of the USDA rice (Oryza sativa L.) germplasm collection. Crop Science. 47(2):869-878.

RiceCAP: Identification of QTL Associated with Rice Milling Yield in a Long Grain Cross - (Proceedings/Symposium)

Fjellstrom, R.G., Linscombe, S.D., Oard, J.H., Moldenhauer, K.K., Boza, E., Jodari, F., Nelson, J., Yeater, K.M., Mcclung, A.M. 2007. RiceCAP: Identification of QTL Associated with Rice Milling Yield in a Long Grain Cross. Plant and Animal Genome XV, January 13-17, 2007, San Diego, CA. Available: http://intl-pag.org/15/abstracts.

Modeling of Milling Yield Components and Their Relationship to Grain Quality QTLs in Long Grain japonica Rice - (Proceedings/Symposium)

Kepiro, J.L., Fjellstrom, R.G., Mcclung, A.M., Yeater, K.M. 2007. Modeling of Milling Yield Components and Their Relationship to Grain Quality QTLs in Long Grain japonica Rice. Plant and Animal Genome XV, January 13-17, 2007, San Diego, CA. Available: http://intl-pag.org/15/abstracts.

Effects of Fertilizer Inputs and Conventional Versus Organic Management on the Physiocochemical Properties and Sensory Quality of Diverse Rice Cultivars - (Proceedings/Symposium)

Champagne, E.T., Bett Garber, K.L., Mcclung, A.M., Grimm, C.C. 2006. Effects of fertilizer inputs and conventional versus organic management on the physiocochemical properties and sensory quality of diverse rice cultivars. UJNR Food & Agricultural Panel Proceedings. CE1:CE5.

Correlative association between the UDSA rice gemrplasm collection and its core subset based on 14 descriptors - (Abstract)

Yan, W., Rutger, J.N., Bryant, R.J., Bockelman, H.E., Fjellstrom, R.G., Chen, M.H., Tai, T., Mcclung, A.M. 2006. Correlative association between the UDSA rice gemrplasm collection and its core subset based on 14 descriptors [abstract]. Agronomy Abstracts. p. 142.

YIELD COMPARISON OF INDICA AND US CULTIVARS GROWN IN THE SOUTHERN UNITED STATES AND BRAZIL - (Experiment Station)

Eizenga, G.C., Mcclung, A.M., Rutger, J.N., Bastos, C.R., Tillman, B. 2006. Yield comparison of indica and U.S. cultivars grown in the southern United States and Brazil. In: Norman, R.J., Meullenet, J.-F, and Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2005.Arkansas Agricultural Experiment Station Research Series 540. p. 62-70. Available: http//www.uark.edu/depts/agripub/Publications/researchseries/.

STUDYING THE INHERITANCE OF HIGH MILLING YIELD IN CYPRESS - (Experiment Station)

Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2006. Studying the inheritance of high milling yield in Cypress. Texas Rice, Highlighting Research in 2006. pp.VII-IX..

SHEATH BLIGHT RESISTANCE IN SOUTHERN RICE - (Experiment Station)

Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2006. Sheath blight resistance in Southern rice. Texas Rice. Highlighting Research in 2006. p. VIII.

RICE FUNCTIONALITY, STARCH STRUCTURE AND THE GENES - (Experiment Station)

Chen, M.H., Fjellstrom, R.G., Pinson, S.R., McClung, A.M., Bergman, C.J. 2006. Rice functionality, starch structure and the genes. Texas Rice, Highlighting Research in 2006. p. XII.

CREATION OF A GENOTYPIC AND PHENOTYPIC DATABASE FOR THE NSGC RICE COLLECTION - (Proceedings/Symposium)

McClung, A.M., Yan, W., Lee, F.N., Marchetti, M.A., Bockelman, H.E., Fjellstrom, R.G. 2006. Creation of a genotypic and phenotypic database for the NSGC rice collection. HortScience. 41(4):936.

DEVELOPMENT AND CHARACTERIZATION OF RICE MUTANTS ALTERED IN THE RICE BLAST RESISTANT GENE PI-TA-MEDIATED DISEASE RESISTANCE PATHWAY - (Abstract)

Jia, Y., Fjellstrom, R.G., Jia, Melissa H., Yan, W., Rutger, J.N., McClung, A.M. 2006. Development and characterization of rice mutants altered in the rice blast resistant gene pi-ta-mediated disease resistance pathway [abstract]. American Phytopathological Society Annual Meeting. Phytopathology. 96:S54.

GENOTYPIC AND PHENOTYPIC ASSESSMENT OF THE NSGC CORE COLLECTION OF RICE FOR RESISTANCT TO PYRICULARIA GRISEA - (Proceedings/Symposium)

McClung, A.M., Yan, W., Jia, Y., Lee, F.N., Marchetti, M.A., Fjellstrom, R.G. 2006. Genotypic and phenotypic assessment of the NSGC Core Collection of rice for resistance to Pyricularia grisea. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006. Houston, Texas. 2006 CDROM.

MOLECULAR MARKERS FOR MILLING YIELD IN SOUTHERN U.S. LONG GRAIN RICE - (Proceedings/Symposium)

Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2006. Molecular markers for milling yield in Southern U.S. long grain rice. Rice Technical Working Group Meeting, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.

EVALUATING MILLING YIELD IN A CYPRESS X PANDA CROSS WITH TRADITIONAL, RE-MILLING AND RE-WETTING TECHNIQUES - (Proceedings/Symposium)

Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2006. Evaluating milling yield in a Cypress x Panda cross with traditional, re-milling and re-wetting techniques. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.

SELECTION FOR STABLE HIGH INCOME GROSSING RICE GENOTYPES - (Proceedings/Symposium)

Samonte, S.O., Wilson, L.T., McClung, A.M., Tabien, R.E. 2006. Selection for stable high income grossing rice genotypes. Rice Technical Working Group Meeting Proceedings, February 29 - March 1, 2006, Houston, TX. 2006. CDROM.

SELECTION FOR STABLE HIGH INCOME GROSSING RICE GENOTYPES - (Proceedings/Symposium)

Samonte, S.O., Wilson, L.T., McClung, A.M., Tabien, R.E. 2006. Selection for stable high income grossing rice genotypes. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.

ADVANCES IN MARKER-ASSISTED SELECTION FOR RICE BLAST RESISTANCE - (Proceedings/Symposium)

Boyett, V.A., Gibbons, J.W., Moldenhauer, K.A., Jia, Y., McClung, A.M., Fjellstrom, R.G. 2006. Advances in marker-assisted selection for rice blast resistance. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.

GENOTYPIC AND PHENOTYPIC ASSESSMENT OF THE NSGC RICE CORE COLLECTION FOR AMYLOSE CONTENT AND ALKALI SPREADING VALUE - (Proceedings/Symposium)

Fjellstrom, R.G., Yan, W., Chen, M.H., Bryant, R.J., Bockelman, H.E., McClung, A.M. 2006. Genotypic and phenotypic assessment of the NSGC Rice Core Collection for amylose content and alkali spreading value. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.

MAPPING SHEATH BLIGHT RESISTANCE QTL(S) IN TROPICAL JAPONICA RICE - (Proceedings/Symposium)

Kepiro, J.L., Fjellstrom, R.G., Pinson, S.R., Shank, A.R., McClung, A.M., Tabien, R.E. 2006. Mapping sheath blight resistance QTL(s) in tropical japonica rice. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.

QTLS FOR MILLING YIELD IN TROPICAL JAPONICA LONG GRAIN RICE - (Proceedings/Symposium)

Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2006. QTLs for milling yield in tropical Japonica long grain rice [abstract]. Plant and Animal Genome Conference Proceedings. p. 162.

MAPPING SHEATH BLIGHT RESISTANCE QTLS IN RICE - (Proceedings/Symposium)

Sharma, Arun, Kepiro, J.L., Fjellstrom, R.G., Pinson, S.R., Shank, A.R., McClung, A.M., Tabien, R. 2006. Mapping sheath blight resistance QTLs in rice [abstract]. Plant and Animal Genome Conference Proceedings. p. 162.

SSR MARKERS CLOSELY LINKED TO THE PI-Z LOCUS ARE USEFUL FOR SELECTION OF BLAST RESISTANCE IN A BROAD ARRAY OF RICE GERMPLASM - (Peer Reviewed Journal)

Fjellstrom, R.G., McClung, A.M., Shank, A.R. 2006. SSR markers closely linked to the Pi-z locus are useful for selection of blast resistance in a broad array of rice germplasm. Molecular Breeding. 17(2):149-157.

Adding Value to Rice From Grain to Product - (Proceedings/Symposium)

Champagne, E.T., Guraya, H.S., Shih, F.F., Kadan, R.S., Mcclung, A.M., Bergman, C. 2005. Adding value to rice from grain to product. UJNR Food & Agricultural Panel Proceedings. 89:92.

DISTRIBUTION OF BLAST RESISTANCE GENE PI-TA IN THE USDA RICE CORE COLLECTION - (Abstract)

Yan, W., Fjellstrom, R.G., McClung, A.M., Jia, Y., Bockelman, H.E. 2005. Distribution of blast resistance gene Pi-ta in the USDA rice core collection [abstract]. American Society of Agronomy Abstracts. p. 230-3.

GENETIC MARKERS REVEAL NOVEL GENES WHICH CONTROL RICE COOKING QUALITY - (Experiment Station)

McClung, A.M., Chen, M., Bockelman, H.E., Bryant, R.J., Yan, W., Fjellstrom, R.G. 2005. Genetic markers reveal novel genes which control rice cooking quality. Texas Rice, Highlighting Research in 2005. pp. X-XI.

DIGGING FOR GOLD - (Experiment Station)

McClung, A.M., Fjellstrom, R.G. 2005. Digging for gold. Texas Rice, Highlighting Research in 2005. p. IX.

PRESIDIO RICE - A NEW LONG GRAIN RICE WITH IMPROVED RATOON CROP POTENTIAL AND MILLING YIELD - (Experiment Station)

McClung, A.M. 2005. Presidio rice - a new long grain rice with improved ratoon crop potential and milling yield. Texas Rice, Highlighting Research in 2005. p. XI.

DETERMINING RICE COOKING, PROCESSING, AND SENSORY QUALITY THROUGH THE USE OF GENETIC MARKERS - (Proceedings/Symposium)

McClung, A.M., Chen, M., Bergman, C.J., Fjellstrom, R.G. 2005. Determining rice cooking, processing, and sensory quality through the use of genetic markers [abstract]. American Association of Cereal Chemists Meeting. p. S-33.

A NEW TOOL FOR SELECTION OF COOKED RICE TEXTURE - (Experiment Station)

Chen, M., McClung, A.M., Fjellstrom, R.G. 2005. A new tool for selection of cooked rice texture. Texas Rice, Highlighting Research in 2005. p. XIV.

EFFECTS OF DRAIN AND HARVEST DATES ON RICE SENSORY AND PHYSICOCHEMICAL PROPERTIES - (Peer Reviewed Journal)

Champagne, E.T., Bett Garber, K.L., Grimm, C.C., Thompson, J., Mcclung, A.M., Mutters, R. 2005. Effects of drain and harvest dates on rice sensory and physicochemical properties. Cereal Chemistry. 82:369-374.

NEW RELEASE OF 'SABINE' RICE FOR THE PROCESSING INDUSTRY - (Experiment Station)

McClung, A.M., 2005. New release of 'Sabine' rice for the processing industry. Rice Production Update. p. 1.

RICE IDENTITY TESTING USING DNA MARKER ANALYSIS OF PROCESSEDOR ARCHIVED RICE TISSUE AND RICE-INGREDIENT FOODS - (Proceedings/Symposium)

Fjellstrom, R.G., McClung, A.M. 2006. Rice identity testing using DNA marker analysis of processed or archived rice tissue and rice-ingredient foods. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.

SELECTION UNDER DOMESTICATION: EVIDENCE FOR A SWEEP IN THE RICE 'WAXY' GENOMIC REGION - (Proceedings/Symposium)

Olsen, Kenneth M., Caicedo, Ana L., Polato, Nick, McClung, A.M., McCouch, S., Purugganan, M.D. 2005. Selection under domestication: Evidence for a sweep in the rice 'waxy' genomic region. Genetics. 17(2):965-974.

MICROSATELLITE MARKERS CLOSELY LINKED TO THE PI-Z BLAST RESISTANCE GENE IN RICE - (Proceedings/Symposium)

Fjellstrom, R.G., McClung, A.M., Shank, A.R. 2005. Microsatellite markers closely linked to the Pi-z blast resistance gene in rice. Plant and Animal Genome Conference. p. 144.

QTL MAPPING OF MILLING YIELD IN SOUTHERN U.S. RICE WITH AMPLIFIED FRAGMENT LENGTH POLYMORPHISM (AFLP) AND MICRO-SATELLITE (SSR) MARKERS - (Proceedings/Symposium)

Kepiro, J.L., Fjellstrom, R.G., McClung, A.M. 2005. QTL mapping of milling yield in southern U.S. rice with amplified fragment length polymorphism (AFLP) and micro-satellite (SSR) markers. Plant and Animal Genome Conference Proceedings. p. 146.

IMPACT OF VARYING DRAIN AND HARVEST DATES ON RICE SENSORY AND PHYSICOCHEMICAL PROPERTIES - (Proceedings/Symposium)

Champagne, E.T., Bett Garber, K.L., Grimm, C.C., Thompson, J., Mutters, R., Mcclung, A.M. 2005. Impact of varying drain and harvest dates on rice sensory and physicochemical properties. 287-291.

NITROGEN UTILIZATION EFFICIENCY: RELATIONSHIPS WITH GRAIN YIELD, GRAIN PROTEIN AND YIELD-RELATED TRAITS IN RICE - (Peer Reviewed Journal)

Samonte, S.B., Wilson, L.T., Medley, J., Pinson, S.R., McClung, A.M., Lales, J. 2006. Nitrogen utilization efficiency: relationships with grain yield, grain protein and yield-related traits in rice. Agronomy Journal 98:168-176.

Nitrogen utilization efficiency: Relationships with grain yield, grain protein, and yield-related traits in rice - (Peer Reviewed Journal)

Samonte, S.O., Wilson, L.T., Pinson, S.R., McClung, A.M., Lales, J.S. 2006. Nitrogen utilization efficiency: Relationships with grain yield, grain protein, and yield-related traits in rice. Agronomy Journal. 98:168-176.

MARKER ASSISTED BREEDING FOR IMPROVING DISEASE RESISTANCE IN U.S. RICE CULTIVARS - (Proceedings/Symposium)

McClung, A.M., Shank, A.R., Marchetti, M.A., Bormans, C., Jodari, F., Johnson, C.W., Park, W.D., Fjellstrom, R.G. 2004. Marker assisted breeding for improving disease resistance in U.S. rice cultivars. Texas Plant Protection Conference. p. 27.

CHARACTERIZATION OF A CORE COLLECTION OF RICE GERMPLASM AND ELITE BREEDING LINES IN THE US WITH GENETIC MARKERS ASSOCIATED WITH COOKING QUALITY - (Proceedings/Symposium)

McClung, A.M., Chen, M., Bockelman, H.E., Bryant, R.J., Yan, W., Fjellstrom, R.G. 2004. Characterization of a core collection of rice germplasm and elite breeding lines in the US with genetic markers associated with cooking quality. Proceedings, 2nd International Rice Functional Genomics Conference, Tucson, Arizona. p. 127.

MOLECULAR GENETIC ANALYSIS OF MILLING YIELD IN RICE USING AMPLIFIED FRAGMENT LENGTH POLYMORPHISM (AFLP) AND MICROSATELLITE (SSR) MARKERS FOR QTL MAPPING - (Proceedings/Symposium)

Kepiro, J.L., McClung, A.M., Fjellstrom, R.G. 2004. Molecular genetic analysis of milling yield in rice using amplified fragment length polymorphism (aflp) and microsatellite (SSR) markers for QTL mapping. United States Japan Natural Resources Protein Panel. pp. 278-282.

Genetic mapping of microsatellite (SSR) markers linked to the rice Pi-i blast resistance gene - (Proceedings/Symposium)

Fjellstrom, R.G., Shank, R.A., McClung, A.M., Jodari, F. 2004. Genetic mapping of microsatellite (SSR) markers linked to the rice Pi-i blast resistance gene [abstract]. 2nd International Symposium of Rice Functional Genomics. p. 98.

THE APPLICATION OF NEW MARKERS FOR PREDICTING BLAST RESISTANCE AND COOKING QUALITY IN RICE - (Proceedings/Symposium)

McClung, A.M., Shank, A.R., Kanter, D., Jodari, F., Beighley, D., Chen, M., Fjellstrom, R.G. 2004. The application of new markers for predicting blast resistance and cooking quality in rice. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.

ARE AGRONOMIC TRAITS IMPACTED BY THE PRESENCE OF PI- GENES WHEN BLAST DISEASE IS ABSENT? - (Proceedings/Symposium)

McClung, A.M., Shank, A.R., Bormans, C., Park, W.D., Fjellstrom, R.G. 2004. Are agronomic traits impacted by the presence of Pi- genes when blast disease is absent? In: Rice Technical Working Group Meeting Proceedings, February 29-Mach 4, 2004, New Orleans, LA. 2004 CDROM

DEVELOPMENT OF IMPROVED METHODS FOR SHEATH BLIGHT EVALUATION - (Proceedings/Symposium)

Shank, A.R., McClung, A.M., Fjellstrom, R.G. 2004. Development of improved methods for sheath blight evaluation. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.

DEVELOPMENT OF GENETIC MARKERS FOR SEMI-DWARF PLANT HEIGHT AND PHOTOPERIOD INSENSITIVITY FOR MARKER AIDED SELECTION IN U.S. RICE - (Proceedings/Symposium)

Fjellstrom, R.G., McClung, A.M., Gibbons, J., Deren, C. 2004. Development of genetic markers for semi-dwarf plant height and photoperiod insensitivity for marker aided selection in u.s. rice. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.

PROGRESS IN DEVELOPING DNA MARKERS FOR MILLING YIELD - (Proceedings/Symposium)

Kepiro, J.L., McClung, A.M., Fjellstrom, R.G. 2004. Progress in developing dna markers for milling yield. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.

GENETIC DIVERSITY AMONG WEST AFRICAN RICE VARIETIES FOR GRAIN QUALITY TRAITS USING CHEMICAL AND DNA MARKER ANALYSES - (Proceedings/Symposium)

Traore, K., Fjellstrom, R.G., McClung, A.M. 2004. Genetic diversity among West African rice varities for grain quality traits using chemical and DNA marker analyses. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.

SINGLE NUCLEOTIDE POLYMORPHISM MARKERS AT THE RICE ALK LOCUS CONTROLLING ALKALI SPREADING VALUE - (Proceedings/Symposium)

Fjellstrom, R.G., Chen, M., Bergman, C.J., McClung, A.M. 2004. Single nucleotide polymorphism markers at the rice alk locus controlling alkali spreading value. In: Rice Technical Working Group Meeting Proceedings, February 29-March 4, 2004, New Orleans, LA. 2004 CDROM.

NEAR INFRARED SPECTROSCOPY FOR DETERMINATION OF PROTEIN AND AMYLOSE IN RICE FLOUR THROUGH USE OF DERIVATIVES - (Peer Reviewed Journal)

SOHN, M., BARTON II, F.E., MCCLUNG, A.M., CHAMPAGNE, E.T. NEAR INFRARED SPECTROSCOPY FOR DETERMINATION OF PROTEIN AND AMYLOSE IN RICE FLOUR THROUGH USE OF DERIVATIVES. CEREAL CHEMISTRY. VOL. 81. ISS. 3. P. 341-344. 2004.

DEVELOPMENT OF DNA MARKERS SUITABLE FOR MARKER ASSISTED SELECTION OF THREE PI- GENES CONFERRING RESISTANCE TO MULTIPLE PYRICULARIA GRISEA PATHOTYPES - (Peer Reviewed Journal)

Fjellstrom, R.G., Bormans, C.A., Marchetti, M.A., Shank, A.R., Park, W.A., McClung, A.M., 2004. Development of dna markers suitable for marker assisted selection of three pi- genes conferring resistance to multiple pyricularia grisea pathotypes. Crop Science. 44:1790-1798.

SENSORY CHARACTERISTICS OF DIVERSE RICE CULTIVARS - (Peer Reviewed Journal)

Champagne, E.T., Bett Garber, K.L., Grimm, C.C., Mcclung, A.M., Bergman, C.J. 2004. Sensory characteristics of diverse rice cultivars as influenced by genetic and environmental factors. Cereal Chemistry. 81:237-243.

PROGRESSING FROM PUTATIVE QTLS TO MARKER ASSISTED SELECTION IN BREEDING - (Proceedings/Symposium)

McClung, A.M., Pinson, S.R., Shank, A.R., Chen, M., Bergman, C.J., Fjellstrom, R.G. 2003. Progressing from putative QTLs to marker assisted selection in breeding [abstract]. Agronomy Abstracts. 2003 CDROM.

THE RICE PLANT: GROWTH, DEVELOPMENT AND GENETIC IMPROVEMENT - (Book/Chapter)

McClung, A.M. 2004. The rice plant: growth, development and genetic improvement. In: Champagne, E.T., editor. Rice: Chemistry and Technology. 3rd Edition. American Association of Cereal Chemists, Inc., St. Paul, MN. p. 25-48.

REGISTRATION OF SABER RICE - (Peer Reviewed Journal)

McClung, A.M., Fjellstrom, R.G., Bergman, C.J., Bormans, C.A., Park, W.D., Marchetti, M.A. 2004. Registration of Saber rice. Crop Science. 44:693-694.

MAPPING OF RICE THERMAL PROPERTIES AND ITS RELATIONSHIP TO THE ALK AND WAXY GENES - (Proceedings/Symposium)

McClung, A.M., Chen, M., Bergman, C.J., Fjellstrom, R.G. 2003. Mapping of rice thermal properties and its relationship to the alk and waxy genes. Plant and Animal Genome Conference Proceedings. P. 168.

MAPPING AND GENETIC CHARACTERIZATION OF A NOVEL BLAST RESISTANCE GENE ARISING FROM THE RICE CULTIVAR LEAH - (Proceedings/Symposium)

Fjellstrom, R.G., Shank, A.R., McClung, A.M. 2003. Mapping and genetic characterization of a novel blast resistance gene arising from the rice cultivar Leah. Plant and Animal Genome Conference Proceedings. P. 170.

REGISTRATION OF SIX SEMIDWARF MUTANTS OF RICE - (Peer Reviewed Journal)

Rutger, J.N., Moldenhauer, K.A., Gravois, K.A., Lee, F.N., Norman, R.J., Mcclung, A.M., Bryant, R.J. 2004. Registration of six semidwarf mutants of rice. Crop Science. 44:364-366.

MOLECULAR MARKERS LINKED TO THE BLAST RESISTANCE GENE PI-Z IN ORYZA SATIVA FOR USE IN MARKER ASSISTED SELECTION - (Peer Reviewed Journal)

BORMANS, C.A., MARCHETTI, M.A., JOHNSON, C.W., MCCLUNG, A.M., PARK, W.D. 2004. MOLECULAR MARKERS LINKED TO THE BLAST RESISTANCE GENE PI-Z IN ORYZA SATIVA FOR USE IN MARKER ASSISTED SELECTION. JOURNAL OF THEORETICAL AND APPLIED GENETICS. 107:1014-1020.

THE EFFECT OF THE WAXY LOCUS (GRANULE BOUND STARCH SYNTHASE) ON PASTING CURVE CHARACTERISTICS IN SPECIALTY RICES (ORYZA SATIVA L.) - (Peer Reviewed Journal)

LARKIN, P., MCCLUNG, A.M., AYRES, N.M., PARK, W.D. THE EFFECT OF THE WAXY LOCUS (GRANULE BOUND STARCH SYNTHASE) ON PASTING CURVE CHARACTERISTICS IN SPECIALTY RICES (ORYZA SATIVA L.). EUPHYTICA 131:243-253. 2003.

NEW SENSORS FOR QUALITY ANALYSIS - (Proceedings/Symposium)

BARTON II, F.E., HIMMELSBACH, D.S., SMITH, W.H., MCCLUNG, A.M., CHAMPAGNE, E.T. NEW SENSORS FOR QUALITY ANALYSIS. THE 31ST UNITED STATES JAPAN NATURAL RESOURCES PROTEIN PANEL. 2003. ABSTRACT. P. 29-30.

RICE MICROSTRUCTURE - COMPARING CULTIVARS - (Proceedings/Symposium)

Wood, D.F., Ogawa, Y., Bailey, D.A., Mckenzie, K., Mcclung, A.M., Ibanez-Carranza, A., Shoemaker, C.F. 2002. Rice microstructure - comparing cultivars. In: John P. Cherry and Attila E. Pavlath, eds., Proceedings of the United States/Japan Natural Resources Protein Panel 31st Annual Syposium. BB-1/BB-7.

PEDIGREE AND DNA MARKER ANALYSIS OF BLAST RESISTANCE GENES IN US RICE GERMPLASM - (Proceedings/Symposium)

MCCLUNG,A.M., SHANK,A.R., MARCHETTI,M.A., JIA,Y., BORMANS,C., PARK,W.D., FJELLSTROM,R.G., PEDIGREE AND DNA MARKER ANALYSIS OF BLAST RESISTANCE GENES IN US RICE GERMPLASM, PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS, 2003. p. 153.

ENHANCING U.S. RICE CULTIVAR DEVELOPMENT WITH MOLECULAR MARKER TECHNOLOGY - (Proceedings/Symposium)

MCCLUNG, A.M., FJELLSTROM, R.G., BORMANS, C.A., BERGMAN, C.J., PINSON, S.R., SHANK, A.R., PARK, W.D. ENHANCING U.S. RICE CULTIVAR DEVELOPMENT WITH MOLECULAR MARKER TECHNOLOGY. PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS. 2003. p. 55.

ANALYSIS OF A SINGLE NUCLEOTIDE POLYMORPHISM THAT CONTROLS THE COOKING QUALITY OF RICE USING A NON-GEL BASES ASSAY - (Peer Reviewed Journal)

BORMANS,C.A., RHODES,R.B., KEPHART,D.D., MCCLUNG,A.M., PARK,W.D., ANALYSIS OF A SINGLE NUCLEOTIDE POLYMORPHISM THAT CONTROLS THE COOKING QUALITY OF RICE USING A NON-GEL BASES ASSAY, EUPHYTICA, 2002. p. 261-267.

USING RICE GENETICS TO DEVELOP VALUE-ADDED MARKETS. - (Abstract)

MCCLUNG,A.M., BERGMAN,C.J., CHAMPAGNE,E., PARK,W.D., USING RICE GENETICS TO DEVELOP VALUE-ADDED MARKETS., AMERICAN ASSOCIATION OF CEREAL CHEMISTS MEETINGS, 2002. p. 164.

WILD QTLS FOR RICE IMPROVEMENT - (Proceedings/Symposium) - (01-Jan-00)