Projects

FUNCTIONAL GENOMICS OF CEREAL DISEASE DEFENSE Appropriated (D)   Accession Number: 410461

MEMORANDUM OF UNDERSTANDING: INTERNATIONAL BARLEY GENOME SEQUENCING CONSORTIUM (IBSC) Memorandum of Understanding (M)   Accession Number: 411452

BARLEY COORDINATED AGRICULTURAL PROJECT: LEVERAGING GENOMICS, GENETICS, AND BREEDING FOR GENE DISCOVERY AND BARLEY IMPROVEMENT Reimbursable (R)   Accession Number: 410291

TRANSLATIONAL GENOMICS TO DECIPHER DISEASE RESISTANCE SIGNALING PATHWAYS Specific Cooperative Agreement (S)   Accession Number: 407758

Publications

Tissue Dependent Limited Pleiotropy Affects Gene Expression in Barley - (Peer Reviewed Journal)

Potokina, E., Druka, A., Luo, Z., Moscou, M., Wise, R.P., Waugh, R., Kearsey, M. 2008. Tissue Dependent Limited Pleiotropy Affects Gene Expression in Barley. Plant Journal. 55:DOI: 10.1111/j.1365-313X.2008.03601.x. Available: http://www3.interscience.wiley.com/cgi-bin/fulltext/120696653/HTMLSTART.

Exploiting Regulatory Variation to Identify Genes Underlying Quantitative Resistance to the Wheat Stem Rust Pathogen Puccinia graminis f. sp. tritici in Barley - (Peer Reviewed Journal)

Druka, A., Potokina, E., Luo, Z., Bonar, N., Druka, I., Zhang, L., Marshall, D.F., Steffenson, B.J., Close, T.J., Wise, R.P., Kleinhofs, A., Williams, R.W., Kearsey, M.J., Waugh, R. 2008. Exploiting Regulatory Variation to Identify Genes Underlying Quantitative Resistance to the Wheat Stem Rust Pathogen Puccinia graminis f. sp. tritici in Barley. Theoretical and Applied Genetics. Available: http://www.springerlink.com/content/x16mlth1489u8161/fulltext.html.

Diversification of Lrk/Tak Kinase Gene Clusters is Associated with Subfunctionalization and Cultivar-specific Transcript Accumulation in Barley - (Peer Reviewed Journal)

Hu, P., Wise, R.P. 2008. Diversification of Lrk/Tak Kinase Gene Clusters is Associated with Subfunctionalization and Cultivar-specific Transcript Accumulation in Barley. Functional and Integrative Genomics. Available: http://www.springerlink.com/content/cn67678u46506857/fulltext.html.

Gene-For-Gene-Mediated Transcriptome Reprogramming in Barley-Powdery Mildew Interactions - (Abstract)

Moscou, M.J., Lauter, N.C., Caldo, R.A., Wise, R.P. 2007. Gene-For-Gene-Mediated Transcriptome Reprogramming in Barley-Powdery Mildew Interactions [abstract]. Annual International Plant & Animal Genome Conference. Abstract Book. p. 88.

PLEXdb: Plant and Pathogen Expression Database and Tools for Comparative and Functional Genomics Analysis - (Abstract)

Cannon, E.K., Dash, S., Lu, H., Nadkarni, D., Thomas, A., Lauter, N.C., Brendel, V., Wise, R.P., Dickerson, J.A. 2007. PLEXdb: Plant and Pathogen Expression Database and Tools for Comparative and Functional Genomics Analysis [abstract]. Annual International Plant & Animal Genome Conference. Abstract Book. p. 351.

Genetical Genomic Dissection of Stem Rust Infection in Barley - (Abstract)

Lauter, N.C., Moscou, M.J., Rodriguez, J.E., Fuerst, G.S., Steffenson, B.J., Jin, Y., Szabo, L.J., Wise, R.P. 2007. Genetical Genomic Dissection of Stem Rust Infection in Barley [abstract]. Annual International Plant & Animal Genome Conference. Book of Abstracts. p. 17.

TEnest: Automated Chronological Annotation and Visualization of Nested Plant Transposable Elements - (Peer Reviewed Journal)

Kronmiller, B.A., Wise, R.P. 2007. TEnest: Automated Chronological Annotation and Visualization of Nested Plant Transposable Elements. Plant Physiology. 146:45-59.

Gene Expression Quantitative Trait Locus Analysis of 16,000 Barley Genes Reveals a Complex Pattern of Genome-wide Transcriptional Regulation - (Peer Reviewed Journal)

Potokina, E., Druka, A., Luo, Z.W., Wise, R.P., Waugh, R., Kearsey, M.J. 2008. Gene Expression Quantitative Trait Locus Analysis of 16,000 Barley Genes Reveals a Complex Pattern of Genome-wide Transcriptional Regulation. Plant Journal. 53(1):90-101.

Transcript Profiling in Host-pathogen Interactions - (Review Article)

Wise, R.P., Moscou, M.M., Whitham, S.A., Bogdanove, A.J. 2007. Transcript Profiling in Host-pathogen Interactions. Annual Review of Phytopathology. 45:329-369.

SFP Genotyping from Affymetrix Arrays is Robust but Largely Detects Cis-acting Expression Regulators - (Peer Reviewed Journal)

Luo, Z.W., Potokina, E., Druka, A., Wise, R.P., Waugh, R., Kearsey, M.J. 2007. SFP genotyping from Affymetrix arrays is robust but largely detects cis-acting expression regulators. Genetics. 176:789-800.

High-throughput gene expression studies provide clues for how cereal crops grow - (Government Publication)

Wise, R.P., Muehlbauer, G. 2006. High-throughput gene expression studies provide clues for how cereal crops grow. USDA-NRI Research Highlight. 3:1-2.

Mapping multiple disease resistance genes using a barley mapping population evaluated in Peru, Mexico, and the USA - (Peer Reviewed Journal)

Rossi, C., Cuesta-Marcos, A., Vales, I., Gomez-Pando, L., Orjeda, G., Wise, R.P., Sato, K., Hori, K., Capettini, F., Vivar, H., Chen, X., Hayes, P. 2006. Mapping multiple disease resistance genes using a barley mapping population evaluated in Peru, Mexico, and the USA. Molecular Breeding. 18(4):355-366.

Mapping multiple disease resistance genes using a barley mapping population evaluated in Peru, Mexico, and the USA - (Peer Reviewed Journal)

Rossi, C., Cuesta-Marcos, A., Vales, I., Gomez-Pando, L., Orjeda, G., Wise, R.P., Sato, K., Hori, K., Capettini, F., Vivar, H., Chen, X., Hayes, P. 2006. Mapping multiple disease resistance genes using a barley mapping population evaluated in Peru, Mexico, and the USA. Molecular Breeding 18:355-366.

CONTRIBUTION OF GENETIC DIVERSITY TO TYPE I ERRORS IN SHORT-OLIGONUCLEOTIDE MICROARRAY ANALYSIS - (Peer Reviewed Journal)

Kirst, M., Caldo, R., Casati, P., Tanimoto, G., Walbot, V., Wise, R.P., Buckler Iv, E.S. 2006. Contribution of genetic diversity to type 1 errors in short-oligonucleotide microarray analysis. Plant Biotechnology Journal. 4:489-498.

Stage-specific Suppression of Basal Defense Discriminates Barley Plants Containing Fast- and Delayed-acting Mla Powdery Mildew Resistance Alleles - (Peer Reviewed Journal)

Caldo, R.A., Nettleton, D., Peng, J., Wise, R.P. 2006. Stage-specific Suppression of Basal Defense Discriminates Barley Plants Containing Fast- and Delayed-acting Mla Powdery Mildew Resistance Alleles. Molecular Plant-Microbe Interactions. 19(9):939-947.

ESTIMATING THE NUMBER OF TRUE NULL HYPOTHESES FROM A HISTOGRAM OF P-VALUES - (Peer Reviewed Journal)

Nettleton, D., Hwang, G., Caldo, R.A., Wise, R.P. 2006. Estimating the number of true null hypotheses from a histogram of p-values. Journal of Agricultural, Biological, and Environmental Statistics. 11:337-356.

BARLEYBASE/PLEXDB: A UNIFIED EXPRESSION PROFILING DATABASE FOR PLANTS AND PLANT PATHOGENS - (Book/Chapter) - (06-Mar-06)

UPSTREAM OPEN READING FRAMES OF THE BARLEY MLA13 POWDERY MILDEW RESISTANCE GENE FUNCTION COOPERATIVELY TO DOWN-REGULATE TRANSLATION - (Peer Reviewed Journal)

Halterman, D.A., Wise, R.P. 2006. Upstream open reading frames of the barley Mla13 powdery mildew resistance gene function cooperatively to down-regulate translation. Molecular Plant Pathology. 7:167-176.

AN ATLAS OF GENE EXPRESSION FROM SEED TO SEED THROUGH BARLEY DEVELOPMENT - (Peer Reviewed Journal)

Druka, A., Muehlbauer, G., Druka, I., Caldo, R., Baumann, U., Rostoks, N., Schreiber, A., Wise, R.P., Close, T., Kleinhofs, A. 2006. An atlas of gene expression from seed to seed through barley development. Functional and Integrative Genomics. 6(3):202-211.

INTERPLAY OF GENE-SPECIFIC DISEASE RESISTANCE, BASAL DEFENSE, AND THE SUPPRESSION OF HOST RESPONSES TO BARLEY POWDERY MILDEW - (Book/Chapter)

Caldo, R.A., Nettleton, D., Wise, R.P. 2006. Interplay of gene-specific disease resistance, basal defense, and the suppression of host responses to barley powdery mildew. In: Sanchez, F., Quinto, C., Lopez-Lara, I., Geiger, O., editors. Biology of Plant Microbe Interactions. St. Paul, MN: International Society of Molecular Plant-Microbe Interactions. Vol. 5, p. 620-624.

BARLEYBASE/WHEATPLEX: THE TRITICEAE HUB OF PLEXDB PLANT EXPRESSION DATABASE - (Proceedings/Symposium)

Wise, R.P., Shen, L., Gong, J., Xin, J., Caldo, R., Nettleton, D., Dickerson, J. 2005. BarleyBase/WheatPLEX: The triticeae hub of PLEXdb plant expression database. International Triticeae Mapping Initiative Workshop. Available: http://wheat.pw.usda.gov/ITMI/ITMI2005/Wise_BarleyBase/.

INTERPLAY OF GENE-SPECIFIC DISEASE RESISTANCE, BASAL DEFENSE, AND THE SUPPRESSION OF HOST-RESPONSES - (Proceedings/Symposium)

Caldo, R.A., Nettleton, D., Wise, R.P. 2005. Interplay of gene-specific disease resistance, basal defense, and the suppression of host-responses. 2005 Society for In Vitro Biology Proceedings. PS1.

MULTIPLE UPSTREAM OPEN READING FRAMES OF THE BARLEY MLA13 POWDERY MILDEW RESISTANCE GENE COLLECTIVELY DOWN-REGULATE TRANSLATION - (Proceedings/Symposium)

Halterman, D.A., Wise, R.P. 2005. Multiple Upstream Open Reading Frames Of The Barley Mla13 Powdery Mildew Resistance Gene Collectively Down-Regulate Translation. XIII Plant and Animal Genome Conference Proceedings. p. P729.

INDUCTION OF BASAL DEFENSE DIFFERENTIATES RAPID AND DELAYED HOST-SPECIFIC BARLEY RESISTANCE TO POWDERY MILDEW - (Proceedings/Symposium)

Caldo, R.A., Nettleton, D., Wise, R.P. 2005. Induction of basal defense differentiates rapid and delayed host-specific barley resistance to powdery mildew. Plant and Animal Genome XIII Conference Proceedings. P665.

AFFYMETRIX MAIZE PILOT EXPRESSION ARRAY - (Proceedings/Symposium)

Williams, A., Caldo, R., Hanna, D., McLean, L., Tanimoto, G., Wise, R.P. 2005. Affymetrix maize pilot expression array. Plant and Animal Genome XIII Conference Proceedings. P897.

BARLEYBASE - PUTTING LARGE-SCALE PLANT EXPRESSION PROFILING DATA INTO A FUNCTIONAL GENOMICS CONTEXT - (Proceedings/Symposium)

Shen, L., Gong, J., Caldo, R.A., Nettleton, D., Cook, D., Wise, R.P., Dickerson, J.A. 2005. BarleyBase - Putting large-scale plant expression profiling data into a functional genomics context. Plant and Animal Genome XIII Conference Proceedings. P878.

SEQUENCING A 1.3 MB CONTIG SPANNING THE RF1 FERTILITY RESTORER LOCUS AS A PROTOTYPE TO ASSESS COMPLEX-GENOME COVERAGE STRATEGIES - (Proceedings/Symposium)

Kronmiller, B., Gobelman Werner, K.S., Wise, R.P. 2005. Sequencing a 1.3 Mb contig spanning the rf1 fertility restorer locus as a prototype to assess complex-genome coverage strategies. 47th Annual Maize Genetics Conference Abstracts. P184.

BARLEYBASE - AN EXPRESSION PROFILING DATABASE FOR PLANT GENOMICS - (Peer Reviewed Journal)

Shen, L., Gong, J., Caldo, R.A., Nettleton, D., Cook, D., Wise, R.P., Dickerson, J.A. 2005. Barleybase - an expression profiling database for plant genomics. Nucleic Acids Research. 33:D614-D618.

FLOR REVISITED: SYSTEMS BIOLOGY IN BARLEY-POWDERY MILDEW INTERACTIONS - (Proceedings/Symposium)

Wise, R.P., Caldo, R.A., Halterman, D.A., Nettleton, D.A. 2004. Flor revisited: Systems biology in barley-powdery mildew interactions. Cereal Rusts and Mildews Conference European and Mediterranean Proceedings. Abstract 1.14, Cereal Rusts and Powdery Mildews Bulletin.

INTERACTION-DEPENDENT GENE EXPRESSION IN MLA-SPECIFIED RESPONSE TO BARLEY POWDERY MILDEW - (Peer Reviewed Journal)

Caldo, R.A., Nettleton, D.A., Wise, R.P. 2004. Interaction-dependent gene expression in Mla-specified response to barley powdery mildew. The Plant Cell. 16:2514-2528.

SYSTEMS BIOLOGY IN BARLEY POWDERY MILDEW INTERACTIONS - (Proceedings/Symposium) - (22-May-04)

PROBE-LEVEL ANALYSIS OF GENE-FOR-GENE-SPECIFIED RESPONSES IN BARLEY-POWDERY MILDEW INTERACTIONS - (Proceedings/Symposium)

Wise, R.P., Caldo, R.A., Nettleton, D.S., Dickerson, J.A. 2004. Probe-level analysis of gene-for-gene-specified responses in barley-powdery mildew interactions. Plant and Animal Genome Conference Proceedings. XII Conference. p. W264.

PARALLEL EXPRESSION PROFILING OF GENE-FOR-GENE-SPECIFIED RESPONSES IN BARLEY-POWDERY MILDEW INTERACTIONS - (Proceedings/Symposium)

Wise, R.P., Caldo, R.A., Nettleton, D.A. 2004. Parallel expression profiling of gene-for-gene-specified responses in barley-powdery mildew interactions.Plant and Animal Genome XII Conference. p. W33.

A SINGLE AMINO ACID SUBSTITUTION IN THE SIXTH LEUCINE-RICH REPEAT OF BARLEY MLA6 AND MLA13 ALLEVIATES DEPENDENCE ON RAR1 FOR DISEASE RESISTANCE SIGNALING - (Proceedings/Symposium)

Halterman, D.A., Wise, R.P. 2004. A single amino acid substitution in the sixth leucine-rich repeat of barley Mla6 and Mla13 alleviates dependence on Rar1 for disease resistance signaling. Plant and Animal Genome Conference Proceedings. XII Conference. p. 858.

DECIPHERING RAR1 SIGNALING SPECIFICITY IN BARLEY/POWDERY MILDEW INTERACTIONS - (Proceedings/Symposium)

Halterman, D.A., Wise, R.P. 2004. Deciphering Rar1 signaling specificity in barley/powdery mildew interactions. Plant and Animal Genome Conference Proceedings. XII Conference. p. W199.

PHYSICAL MAPPING OF NEW LRK AND TAK RECEPTOR-LIKE KINASE GENE CLUSTERS IN BARLEY - (Proceedings/Symposium)

Hu, P., Wise, R.P. 2004. Physical mapping of new Lrk and Tak receptor-like kinase gene clusters in barley. Plant and Animal Genome Conference Proceedings. XII Conference. p. 857.

COMPARATIVE ANALYSIS OF A ONE-MEGABASE SEQUENCE SPANNING THE MAIZE RF1 FERTILITY RESTORER WITH THE RICE GENOME - (Abstract)

Kronmiller, B., Gobelman Werner, K.S., Wise, R.P. 2004. Comparative analysis of a one-megabase sequence spanning the maize Rf1 fertility restorer with the rice genome. 46th Maize Genetics Conference. p. 112.

COMPARATIVE ANALYSIS OF A ONE-MEGABASE SEQUENCE SPANNING THE MAIZE RF1 FERTILITY RESTORER WITH THE RICE GENOME - (Proceedings/Symposium)

Kronmiller, B., Gobelman Werner, K.S., Wise, R.P. 2004. Comparative analysis of a one-megabase sequence spanning the maize rf1 fertility restorer with the rice genome. Proceedings of Keystone Symposia "Comparative Genomics of Plants." p. 117.

INTERPLAY OF NON-SPECIFIC AND SPECIFIC MODULATION PATTERNS OF BARLEY TRANSCRIPTIONAL RESPONSES DURING POWDERY MILDEW INFECTION - (Proceedings/Symposium)

Caldo, R.A., Nettleton, D., Wise, R.P. 2004. Interplay of non-specific and specific modulation patterns of barley transcriptional responses during powdery mildew infection. Plant and Animal Genome Conference Proceedings. XII Conference. p. 793.

PARALLEL GENE EXPRESSION ANALYSIS IN CEREAL DEVELOPMENT - (Proceedings/Symposium)

Druka, A., Muehlbauer, G., Caldo, R., Wise, R.P., Close, T., Kleinhofs, A., Graner, A., Schulman, A., Langridge, P., Sato, K., Hayes, P., Marshall, D., Waugh, R. 2004. Parallel gene expression analysis in cereal development. Plant and Animal Genome XII Conference. p. 783.

BARLEYBASE - AN EXPRESSION PROFILING DATABASE FOR CEREAL GENOMICS - (Proceedings/Symposium)

Tang, X., Gong, J., Xin, J., Lishuang, S., Turner, S., Caldo, R., Nettleton, D., Wise, R.P., Dickerson, J. 2004. BarleyBase - An expression profiling database for cereal genomics. Plant and Animal Genome XII Conference. p. 944.

A SINGLE AMINO ACID SUBSTITUTION IN THE SIXTH LEUCINE-RICH REPEAT OF BARLEY MLA6 AND MLA13 ALLEVIATES DEPENDENCE ON RAR1 FOR DISEASE RESISTANCE SIGNALING - (Peer Reviewed Journal)

Halterman, D.A., Wise, R.P. 2004. A single amino acid substitution in the sixth leucine-rich repeat of barley MLA6 and MLA13 alleviates dependence on RAR1 for disease resistance signaling. Plant Journal. 38:215-226.

A NEW RESOURCE FOR CEREAL GENOMICS: 22K BARLEY GENECHIP COMES OF AGE - (Peer Reviewed Journal)

Close, T., Wanamaker, S., Caldo, R., Turner, S., Ashlock, D., Dickerson, J., Wing, R., Muehlbauer, G., Kleinhofs, A., Wise, R.P. 2004. A new resource for cereal genomics: 22k barley genechip comes of age. Plant Physiology. 134:960-968.

A SINGLE AMINO ACID SUBSTITUTION IN THE SIXTH LEUCINE-RICH REPEAT OF BARLEY MLA ALLEVIATES DEPENDENCE ON RAR1 FOR DISEASE RESISTANCE SIGNALING - (Proceedings/Symposium)

HALTERMAN, D.A., WISE, R.P. A SINGLE AMINO ACID SUBSTITUTION IN THE SIXTH LEUCINE-RICH REPEAT OF BARLEY MLA ALLEVIATES DEPENDENCE ON RAR1 FOR DISEASE RESISTANCE SIGNALING. AVAILABLE FROM: http://www.apsnet.org/meetings/2003/abstracts/a03ma232.htm. AMERICAN PHYTOPATHOLOGICAL SOCIETY ANNUAL MEETING. 2003. Phytopathology 93:S32 Publication no. P-2003-0232-AMA.

A SINGLE AMINO ACID SUBSTITUTION IN THE SIXTH LEUCINE-RICH REPEAT OF BARLEY MLA ALLEVIATES DEPENDENCE ON RAR1 FOR DISEASE RESISTANCE SIGNALING - (Proceedings/Symposium)

HALTERMAN, D.A., WISE, R.P. A SINGLE AMINO ACID SUBSTITUTION IN THE SIXTH LEUCINE-RICH REPEAT OF BARLEY MLA ALLEVIATES DEPENDENCE ON RAR1 FOR DISEASE RESISTANCE SIGNALING. AVAILABLE FROM: http://abstracts.aspb.org/pb2003/public/P49/1386.html. AMERICAN SOCIETY OF PLANT BIOLOGISTS ANNUAL MEETING. 2003. Poster 821 Session 49; Plant Pathogen/Symbiont Interactions.

PARALLEL EXPRESSION PROFILING OF GENE-FOR-GENE-SPECIFIED RESPONSES IN BARLEY-POWDERY MILDEW INTERACTIONS - (Proceedings/Symposium)

CALDO, R., NETTLETON, D., TURNER, S., DICKERSON, J., WISE, R.P. PARALLEL EXPRESSION PROFILING OF GENE-FOR-GENE-SPECIFIED RESPONSES IN BARLEY-POWDERY MILDEW INTERACTIONS. AVAILABLE FROM: http://www.ispmb2003.com/. PLANT MOLECULAR BIOLOGY INTERNATIONAL CONFERENCE PROCEEDINGS. 2003. Poster S21-51.

POWDERY MILDEW INDUCED MLA MRNAS ARE ALTERNATIVELY SPLICED AND CONTAIN UPSTREAM OPEN READING FRAMES THAT CUMULATIVELY DOWN-REGULATE TRANSLATION - (Proceedings/Symposium)

HALTERMAN, D.A., WISE, R.P. POWDERY MILDEW INDUCED MLA MRNAS ARE ALTERNATIVELY SPLICED AND CONTAIN UPSTREAM OPEN READING FRAMES THAT CUMULATIVELY DOWN-REGULATE TRANSLATION. AVAILABLE FROM: http://www.keystonesymposia.org/Meetings/ViewMeetings.cfm?MeetingID=658. KEYSTONE SYMPOSIA. 2003.

COMPREHENSIVE TRANSCRIPTIONAL PROFILING OF BARLEY-POWDERY MILDEW INTERACTIONS USING AFFYMETRIX GENECHIPS - (Proceedings/Symposium)

CALDO, R., NETTLETON, D., TURNER, S., ASHLOCK, D., DICKERSON, J., WISE, R.P. COMPREHENSIVE TRANSCRIPTIONAL PROFILING OF BARLEY-POWDERY MILDEW INTERACTIONS USING AFFYMETRIX GENECHIPS. AVAILABLE FROM: http://www.keystonesymposia.org/Meetings/ViewMeetings.cfm?MeetingID=658. KEYSTONE SYMPOSIA. 2003.

MLA RESISTANCE SPECIFICITIES ARE NOT LINEAR DESCENDANTS OF A COMMON ANCESTOR, BUT EVOLVED SEPARATELY SUBSEQUENT TO GENE DUPLICATION - (Proceedings/Symposium)

HALTERMAN, D.A., WISE, R.P. MLA RESISTANCE SPECIFICITIES ARE NOT LINEAR DESCENDANTS OF A COMMON ANCESTOR, BUT EVOLVED SEPARATELY SUBSEQUENT TO GENE DUPLICATION. AVAILABLE FROM: http://www.intl-pag.org/11/abstracts/P7b_P828_XI.html. PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS. 2003. ABSTRACT NO. P828.

POWDERY MILDEW INDUCED MLA MRNAS ARE ALTERNATIVELY SPLICED AND CONTAIN UPSTREAM OPEN READING FRAMES THAT CUMULATIVELY DOWN REGULATE TRANSLATION - (Proceedings/Symposium)

HALTERMAN, D.A., WEI, F., WISE, R.P. POWDERY MILDEW INDUCED MLA MRNAS ARE ALTERNATIVELY SPLICED AND CONTAIN UPSTREAM OPEN READING FRAMES THAT CUMULATIVELY DOWN REGULATE TRANSLATION. AVAILABLE FROM: http://www.intl-pag.org/11/abstracts/P7b_P827_XI.html. PLANT AND ANIMAL GENOME CONFERENCE PROCEEDINGS. 2003. ABSTRACT NO. P827.

PARALLEL EXPRESSION ANALYSIS USING BARLEY MICROARRAYS - (Abstract)

Wise, R.P., Caldo, R.A., Turner, S., Ashlock, D., Dickerson, J. 2003. Parallel expression analysis using barley microarrays. Plant and Animal Genome Conference Proceedings. XI Conference. p. W50.

EVOLUTIONARY ORGANIZATION OF THE MLA LOCUS IN THE POACEAE - (Abstract)

Turner, S., Wise, R.P. 2003. Evolutionary organization of the Mla locus in the poaceae. Plant and Animal Genome Conference Proceedings. XI Conference. p. 351.

GENOME-WIDE PHYSICAL MAPPING OF PATHOGEN-RESPONSE GENES IN BARLEY - (Abstract)

Hu, P., Wise, R.P. 2003. Genome-wide physical mapping of pathogen-response genes in barley. Plant and Animal Genome Conference Proceedings. XI Conference. p. 403.

ELUCIDATION OF THE INCOMPATIBLE AND COMPATIBLE BARLEY-POWDERY MILDEW INTERACTIONS USING AFFYMETRIX GENECHIPS: A MICROARRAY REPRESENTATION OF THE QUADRATIC CHECK - (Abstract)

Caldo, R.A., Wise, R.P. 2003. Elucidation of the incompatible and compatible barley-powdery mildew interactions using affymetrix genechips: a microarray representation of the quadratic check. Plant and Animal Genome Conference Proceedings. XI Conference. p. 758.

POWDERY MILDEW INDUCED MLA MRNAS ARE ALTERNATIVELY SPLICED AND CONTAIN UPSTREAM OPEN READING FRAMES - (Peer Reviewed Journal)

Halterman, D.A., Wei, F., Wise, R.P. 2003. Powdery mildew induced Mla mRNAs are alternatively spliced and contain upstream open reading frames. Plant Physiology. 131(2):558-567.

NUCLEAR-MEDIATED MITOCHONDRIAL GENE REGULATION AND MALE FERTILITY IN HIGHER PLANTS: LIGHT AT THE END OF THE TUNNEL? - (Review Article)

Wise, R.P., Pring, D.R. 2002. Nuclear-mediated mitochondrial gene regulation and male fertility in higher plants: light at the end of the tunnel? Proceedings of the National Academy of Sciences. 99:10240-10242.

RDS AND RIH MEDIATE HYPERSENSITIVE CELL DEATH INDEPENDENT OF GENE-FOR-GENE RESISTANCE TO THE OAT CROWN RUST PATHOGEN, PUCCINIA CORONATA F. SP. AVENAE - (Government Publication) - (20-Jun-02)