View
all Human Genome Program Mapping abstracts, or view individual Human
Genome Program Mapping abstracts by clicking on their titles
below.
54. Third-Strand
Binding Probes for Duplex DNA in Particles of Varying
Size
Marion D. Johnson III and Jacques
R. Fresco
Princeton University, Department of Molecular
Biology, Princeton, New Jersey
mjohnson@molbio.princeton.edu,
jrfresco@princeton.edu
55. Optical Mapping:
A Complete System For Whole Genome Shotgun
Mapping
D.C. Schwartz1,2,
T. Anantharaman2, J. Apodaca1, C. Aston1,
V. Clarke1, D. Gebauer1, S. Delobette1,
E. Dimalanta1, J. Edington1, A. Evenzehav1,
J. Giacalone1, V. Gibaja1, C. Hiort1,
E. Huff1, J. Jing1, Z. Lai1, D.
Lazaro1,
E. Lee1, J. Lin1, K. Lin1, B.
Mishra2,
L. Ni1, S. Paxia2, B. Porter1, R.
Qi1,
A. Ramanathan1, Y. Skiadis1, J. Vafai1,
W. Wang1, H. Zhao1
1W. M. Keck Laboratory for
Biomolecular Imaging, Department of Chemistry, and 2Courant
Institute of Mathematical Sciences, Department of Computer Science, New
York University, NY 10003
schwad01@mcrcr6.med.nyu.edu
56. Verifying
Sequence By Atomic Force Microscopy
David P. Allison and Peter R.
Hoyt
Life Sciences Division, Oak Ridge National
Laboratory, Oak Ridge, TN 37831-6123
allisondp@ornl.gov
57. Molecular
Cytogenetics Comes of Age: A Resource that Extends From "T" to
Shining "T"
J. R. Korenberg1, X.
N. Chen1, D. Noya1, X.Wu2, B.
Birren2,
T. Hudson2,3
1 Medical Genetics Birth Defect
Center, Cedars-Sinai Medical Center, University of California at Los Angeles,
Los Angeles, California; 2Whitehead Institute, Massachusetts
Institute of Technology, Massachusetts; and 3McGill University,
Montreal, Canada
jkorenberg@xchg.peds.csmc.edu
58. Automated
Purification of Blood, or Bacterial Genomic
DNA
Dan P. Langhoff, Tuyen Nguyen, and William
P. MacConnell
MacConnell Research Corporation, San Diego,
California
macres@macconnell.com
59. New Host Strains
for Stabilization and Modification of YAC
Clones
Natalay Kouprina, Maxim Koriabine, and
Vladimir Larionov
Laboratory of Molecular Genetics, National
Institute of Environmental Health Sciences, P.O. Box 12233, Research Triangle
Park, NC 27709
larionov@niehs.nih.gov
60. Direct Isolation
of a Centromeric Region from a Human Mini-Chromosome by in Vivo Recombination
in Yeast
Natalay Kouprina, Motonobu Katoh,
Mitsuo Oshimura, and Vladimir Larionov
Laboratory of Molecular Genetics, National
Institute of Environmental Health Sciences (NIEHS), Research Triangle Park,
NC 27709
kouprina@niehs.nih.gov
61. Insert Clone
Selection by Sorting GFP-Expressing E.
coli
Juno Choe and Ger van den
Engh
Department of Molecular Biotechnology,
University of Washington, WA 98195
choe@biotech.washington.edu
62. A Resource
of Mapped BAC Clones for Identifying Cancer Chromosome
Aberrations
Norma J. Nowak1, Jeffrey
Conroy1, Greg P. Caldwell1, Joseph Catanese1,
Barbara Trask2, John D. McPherson3, David R.
Bentley4,
Grace Shen5, and Pieter J. de Jong1
1Department of Cancer Genetics,
Roswell Park Cancer Institute, Buffalo, NY 14263; 2Department
of Molecular Biotechnology, University of Washington School of Medicine,
Seattle, WA 98195; 3Department of Genetics, Washington University
School of Medicine, St. Louis, MO 63108; 4Sanger Centre, Hinxton,
Cambridge, CB10-1RQ, UK and 5CCAP Program; and 5National Cancer
Institute, Bethesda, MD
nowak@dejong.med.buffalo.edu
63. Preparation
of New BAC Vectors for BAC Cloning and Transformation- Associated Recombination
("TAR") Cloning
Changjiang Zeng1, Yu
Wang1, Kazutoyo Osoegawa1, Natasha
Kouprina2,
Vladimir Larionov2, and Pieter J. de Jong1
1Department of Cancer Genetics,
Roswell Park Cancer Institute, Buffalo, NY 14263 and 2Laboratory
of Molecular Genetics, National Institute of Environmental Health Sciences
(NIEHS), Research Triangle Park, NC 27709
zeng@dejong.med.buffalo.edu
64. "RPCI" Human and Mouse
Bacterial Artificial Chromosome Libraries: Construction and
Characterization
Kazutoyo Osoegawa1,
ChungLi
Shu1, Baohui
Zhao1,
Minako Tateno2, Eirik
Frengen1, Joseph J.
Catanese1,
Yoshihide Hayashizaki2 and Pieter J. de Jong1
1Department of Cancer Genetics,
Roswell Park Cancer Institute, Buffalo, NY 14263 and 2Genome
Science Laboratory, Riken Tsukuba Life Science Center, Japan
65. Characterization
of a BAC Clone Resource for Human Genomic Sequencing: Analysis of 150
Mb of Human STCs and Implications for Human Genomic
Sequencing
G. G. Mahairas, J. C. Wallace, J.
Furlong, K Smith, S. Swartzell, A. Keller, HTSC Staff and L. Hood
High Throughput Sequencing Center, University
of Washington, Seattle, WA 98109
gmahaira@u.washington.edu
66. Human BAC
End Sequencing
Shaying Zhao, Mark Adams, Bill Nierman,
and Joel Malek
TIGR, The Institute for Genomic Research,
9712 Medical Center Drive, Rockville MD 20850
szhao@tigr.org
67. Construction
of a Genome-Wide Human BAC-Unigene
Resource
Bum-chan Park1, Robert
Xuequn Xu, Chang-Su Lim, Mei Wang, Aaron Rosin, Steve Mitchell, Hee Moon
Park1, Eunpyo Moon2, Ung-Jin Kim, and Melvin I.
Simon
Division of Biology, Caltech, Pasadena,
CA 91125
1Chungnam University, Taejon,
Korea and 2Ajou University, Suwon, Korea
simonm@cco.caltech.edu
68. A New Bacterial
Artificial Chromosome (BAC) Vector, a Large-Insert (Average of Over 200
kb) BAC Library of the Human, and an Improved Method of Construction
of BAC Libraries
Sangdun Choi, Yu-Jiun Chen, Mel
Simon, and Hiroaki Shizuya
Division of Biology, California Institute
of Technology, Pasadena, CA 91125, USA
schoi@cco.caltech.edu
69. One Tier Pooling
of a Total Genomic BAC Library
D.C. Torney, J.L. Longmire, D.C. Bruce,
J. Fawcett, M. Campbell, J. Tesmer, M. Maltbie, B. Taggett, T. Tatum, P.
Jewett, J. Meyne, N. Lenhert, Y. Valdez, S. Bailey, A. Schliep1,
L.L. Deaven, and N.A. Doggett
Life Sciences Division and Center for
Human Genome Studies, Los Alamos National Laboratory, Los Alamos, NM 87545
and 1University of Cologne, Cologne, Germany
doggett@gnome.lanl.gov
70. High Density
Colony Filter Production and Automated Data Analysis for Efficient Hybridization
Screening of BAC Libraries
Anca Georgescu, Laura Kegelmeyer,
Bernadette Lato, Hummy Badri, Matthew Groza, and Anne Olsen
Human Genome Center, Biology and Biotechnology
Research Program, Lawrence Livermore National Laboratory, Livermore, CA
94551
olsen2@llnl.gov
71. Systematic
Conversion of a YAC/STS Map into a Sequence Ready BAC
Map
C. Han and N.A. Doggett
Joint Genome Institute, Center for Human
Genome Studies, Los Alamos National Laboratory, Los Alamos, NM 87545
chan@telomere.lanl.gov
72. An Arrayed
BAC Resource for the High Resolution Mapping of Cancer-Related Chromosome
Aberrations
Eunpyo Moon1, Jonghyeob
Lee1,
Mei Wang, Bum-Chan Park, Ken Myambo2, Colin Collins2,
Melvin Simon, Ung-Jin Kim
1Ajou University, Suwon,
Korea
2 Lawrence Berkeley National
Laboratory, Berkeley, California
simonm@cco.caltech.edu
73. A 12 Mbp Completely
Contiguous Sequence-Ready BAC Contig in Human Chromosome
16p13.1-11.2
Yicheng Cao, Hyung Lyun Kang, So
Hee Dho1, Diana Bocskai, Mei Wang, Xuequn Xu, Jun-Ryul
Huh1,
Byeong-Jae Lee1, Francis Kalush2, Judith G.
Tesmer3,
Eunpyo Moon4, Norman A. Doggett3, Mark D.
Adams2,
Melvin Simon, and Ung-Jin Kim
1 Institute of Molecular Biology
and Genetics, Seoul National University, Seoul, Korea; 2 The
Institute for Genomic Research, Rockville, Maryland; 3 Los Alamos
National Laboratory, Los Alamos, New Mexico; and 4 Ajou University,
Suwon, Korea
simonm@cco.caltech.edu
74. Completing
the Sequence-Ready Map of Chromosome 19
Laurie Gordon, Anca Georgescu, Mari
Christensen, Sha Hammond, Hummy Badri, Bernadette Lato, Matthew Groza,
Linda Ashworth, Mark Wagner, and Anne Olsen
Human Genome Center, Biology and Biotechnology
Research Program, Lawrence Livermore National Laboratory, Livermore, CA
94551
olsen2@llnl.gov
75. High-Throughput
Multiplexed Fluorescent-Labeled Fingerprinting of BAC
Clones
Yan Ding1, Martin D.
Johnson2, Wang Q. Chen3, Gigi E Park1,
Yujin Chen1, and Hiroaki Shizuya1
1Beckman Institute, Division
of Biology, California Institute of Technology, Pasadena, CA 91125, U.
S. A; 2PE Biosystems, 850 Lincoln Center Drive, Foster City,
CA 94404, U. S. A.; and 3Paracel Inc., 80 S. Lake Ave #650,
Pasadena, CA 91101-2616, U. S. A.
yding@cco.caltech.edu
76. Progress Towards
a High Resolution Sequence-Ready Map of Human Chromosome
5
Steve Lowry, Ze Peng, Duncan Scott, Yiwen
Zhu, Mei Wang, Roya Hosseini, Michele Bakis, Joel Martin, Ingrid Plajzer-Frick,
Jeff Shreve, and Jan-Fang Cheng
Joint Genome Institute, Lawrence Berkeley
National Laboratory, Berkeley, CA 94720
jcheng@mhgc.lbl.gov
77. High Throughput
Fingerprinting and Contig Assembly to Supply Sequence Ready Templates
to the JGI-PSF
Linda Meincke, Robert Sutherland,
Connie Campbell, Joe Fawcett, Phil Jewett, Lynn Clark, Cliff Han, Larry
Deaven, and Norman Doggett
Joint Genome Institute, Center for Human
Genome Studies, Los Alamos National Laboratory, Los Alamos, NM 87545
meincke@telomere.lanl.gov
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