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Gene Info

Gene Information For:Mm. Oat, Ornithine aminotransferase
Sequence ID:NM_016978

Database Links

UniGeneEntrez GeneSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7 63.0

Chromosomal Position (from UCSC)

Chromosomal Position:7: 139749308 - 139768072

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498240Full LengthBC008119ornithine aminotransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058674  

Protein Infomation

RefSeq

mRNAProteinSwissProtEnzymePfam Motifs
NM_016978 NP_058674 P29758
Q3TG75
EC 2.6.1.13 Aminotran_3

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC008119 AAH08119 P29758
Q3TG75
EC 2.6.1.13
AK145877 BAE26718 Q3UKT3  
AK146413 BAE27150 Q3UJK5  
AK168851 BAE40673 P29758
Q3TG75
EC 2.6.1.13
X64837 CAA46049 P29758
Q3TG75
EC 2.6.1.13

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Oat NP_058674 R.norvegicus Oat 64313   NP_071966 98
H.sapiens OAT 4942 Gene Info NP_000265 91
A.gambiae ENSANGG00000011961 1268731   XP_307297 72
A.gambiae AgaP_AGAP004793 1278432   XP_318019 72
D.melanogaster Oat 40145   NP_649139 70
C.elegans C16A3.10 175908   NP_741194 66
S.pombe SPBC21C3.08c 2540626   NP_596588 57
S.cerevisiae CAR2 851158   NP_013542 55
N.crassa NCU00194.1 2704475   XP_322280 55
P.falciparum PFF0435w 3885911   XP_966078 55
M.grisea MGG_06392 2684547   XP_369877 54
A.thaliana delta-OAT 834660   NP_199430 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta


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