CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Mm. -, RAB7, member RAS oncogene family
Sequence ID:NM_009005

Database Links

UniGeneEntrez GeneSNPViewerAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6 38.5

Chromosomal Position (from UCSC)

Chromosomal Position:6: 87950428 - 87963684

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3584891Full LengthBC004597RAB7, member RAS oncogene family
6414012Full LengthBC086793RAB7, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033031  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_009005 NP_033031   Ras
MMR_HSR1
Miro

Related Sequences

 
mRNAGenPeptSwissProt
BC004597 AAH04597 P51150
Q4FJQ0
BC086793 AAH86793 P51150
Q4FJQ0
AK005004 BAB23738 P51150
Q4FJQ0
AK139914 BAE24180 P51150
Q4FJQ0
AK148117 BAE28355 P51150
Q4FJQ0
AK151078 BAE30093 P51150
Q4FJQ0
AK152666 BAE31401 P51150
Q4FJQ0
AK154234 BAE32452 P51150
Q4FJQ0
AK158971 BAE34750 P51150
Q4FJQ0
AK159928 BAE35490 P51150
Q4FJQ0
AB232599 BAF02861 Q4FJQ0
X89650 CAA61797 P51150
CT010352 CAJ18560 P51150
Q4FJQ0

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rab7 NP_033031 H.sapiens RAB7A 7879 Gene Info NP_004628 100
R.norvegicus Rab7 29448   NP_076440 99
A.gambiae ENSANGG00000011250 1268799   XP_307368 79
A.gambiae AgaP_AGAP001617 1281557   XP_321482 79
N.crassa NCU03711.1 2704912   XP_323013 77
D.melanogaster Rab7 42841   NP_524472 76
M.grisea MGG_08144 2678359   XP_362561 75
C.elegans rab-7 174834   NP_496549 72
A.thaliana AtRABG3f/AtRab7B 821415   NP_188512 69
S.pombe ypt7 2540763   NP_596307 67
S.cerevisiae YPT7 855012   NP_013713 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.