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Gene Info

Gene Information For:Mm. Ssb, Sjogren syndrome antigen B
Sequence ID:NM_009278
NM_001110145

Database Links

UniGeneEntrez GeneSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C2|2 41.0

Chromosomal Position (from UCSC)

Chromosomal Position:2: 69699679 - 69709487

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3483153Full LengthBC106150Sjogren syndrome antigen B
3593742Full LengthBC003820Sjogren syndrome antigen B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033304  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_001110145 NP_001103615    
NM_009278 NP_033304 Q564E6
P32067
RRM_1
La

Related Sequences

 
mRNAGenPeptSwissProt
L00993 AAA39415 Q564E6
P32067
BC003820 AAH03820 Q564E6
P32067
BC106150 AAI06151 Q564E6
P32067
AK017822 BAB30957  
AK032940 BAC28092 Q564E6
P32067
AK088370 BAC40309  
AK088650 BAC40478 Q564E6
P32067
AK088677 BAC40498  
AK141487 BAE24699 Q564E6
P32067
AK168828 BAE40655 Q3TG93
Y07951 CAA69249 P32067

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ssb NP_033304 R.norvegicus Ssb 81783   NP_112381 96
H.sapiens SSB 6741 Gene Info NP_003133 82
A.gambiae AgaP_AGAP008952 1279920   XP_319705 38
D.melanogaster La 35305   NP_724257 36
C.elegans C44E4.4 172070   NP_491411 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta


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