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Gene Info

Gene Information For:Hs. SSU72, SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
Sequence ID:NM_014188

Database Links

UniGeneEntrez GeneDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 1466916 - 1499867

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961422Full LengthBC008070SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054907  

Protein Infomation

RefSeq

mRNAProteinSwissProtEnzymePfam Motifs
NM_014188 NP_054907 Q9NP77 EC 3.1.3.16 Ssu72

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF161530 AAF29145 Q9NP77 EC 3.1.3.16
BC008070 AAH08070 Q9NP77 EC 3.1.3.16
AF277178 AAK07538 Q9NP77 EC 3.1.3.16
AF305818 AAK55521 Q96JR5  
DQ892987 ABM83913    
DQ896236 ABM87235    
AK001809 BAA91921 Q9NP77 EC 3.1.3.16
AK023110 BAB14410 Q9NP77 EC 3.1.3.16
AK297505 BAG59918 B4DMK6  
AJ276409 CAC81713 Q9NP77 EC 3.1.3.16

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SSU72 NP_054907 R.norvegicus Ssu72 298681   NP_001020828 99
M.musculus Ssu72 68991 Gene Info NP_081175 98
A.gambiae AgaP_AGAP011470 1278356   XP_317836 64
D.melanogaster CG14216 32973   NP_608342 61
C.elegans T13C2.4 188472   NP_495386 57
A.thaliana AT1G73820 843718   NP_177523 52
M.grisea MGG_03704 2676777   XP_361161 52
N.crassa NCU03114.1 2712653   XP_330550 49
S.cerevisiae SSU72 855499   NP_014177 48
S.pombe ssu72 2543452   NP_594076 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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