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Gene Info

Gene Information For:Hs. SOD1, Superoxide dismutase 1, soluble
Sequence ID:NM_000454

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesSNP500CancerRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.1|21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 31953874 - 31962762

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140145Full LengthBC001034superoxide dismutase 1, soluble

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000445  

Protein Infomation

RefSeq

mRNAProteinSwissProtEnzymePfam Motifs
NM_000454 NP_000445 P00441 EC 1.15.1.1 Sod_Cu

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC001034 AAH01034 P00441 EC 1.15.1.1
AY049787 AAL15444 P00441 EC 1.15.1.1
BT006676 AAP35322 P00441 EC 1.15.1.1
AY450286 AAR21563 P00441 EC 1.15.1.1
EF151142 ABL96616 P00441 EC 1.15.1.1
AK312116 BAG35052 P00441 EC 1.15.1.1
X02317 CAA26182 P00441 EC 1.15.1.1
CR450355 CAG29351 P00441 EC 1.15.1.1
CR541742 CAG46542 P00441 EC 1.15.1.1

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene		 Gene Info Protein
H.sapiens SOD1 NP_000445 M.musculus Sod1 20655 Gene Info NP_035564 84
R.norvegicus Sod1 24786   NP_058746 83
M.musculus EG667310 667310 Gene Info XP_994787 82
D.melanogaster Sod 39251   NP_476735 62
A.gambiae SOD3 1272692   XP_311594 59
C.elegans sod-1 174141   NP_001021957 58
M.grisea MGG_02625 2682824   XP_366549 57
S.pombe sod1 2542128   NP_593163 57
S.cerevisiae SOD1 853568   NP_012638 56
A.thaliana CSD1 837405   NP_001077494 55
N.crassa NCU02133.1 2711251   XP_329323 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database

BioCarta Pathways
Pathway information courtesy of BioCarta

Kegg Pathways
Pathway information courtesy of Kegg

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