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Gene Info

Gene Information For:Hs. HLA-A29.1, Major histocompatibility complex, class I, A
Sequence ID:NM_002116
NM_001080840

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 30018315 - 30021383

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821717Full LengthBC019236major histocompatibility complex, class I, A
3510139Full LengthBC003069major histocompatibility complex, class I, A
4157200Full LengthBC008611major histocompatibility complex, class I, A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002107  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_001080840 NP_001074309 P30512  
NM_002116 NP_002107 P04439 MHC_I
MHC_I_C
C1-set
NM_002127 NP_002118 P17693
Q6DU14
MHC_I
C1-set

Related Sequences

 
mRNAGenPeptSwissProt
U03907 AAA03605 P10314
U03697 AAA03720 Q5SPM2
P30450
L18898 AAA17012 Q09160
M12377 AAA17889 Q9UM27
M98453 AAA35991 P30450
M27537 AAA36227 Q29945
M32321 AAA36234 P18462
M11887 AAA52656 P01892
M90683 AAA52673 P17693
Q6DU14
M90685 AAA58653 Q31611
M90686 AAA58654 Q29897
M12758 AAA59598 Q29926
M84375 AAA59599 P16189
M64740 AAA59600 Q95J06
P05534
M27971 AAA59602 O19689
M84377 AAA59603 P01892
M84378 AAA59604 P01892
M84379 AAA59606 P01892
Q53Z42
M27538 AAA59636 Q29946
M27539 AAA59637 Q29947
M24042 AAA59653 Q5MAG5
P01892
M24095 AAA59655 P30450
M90684 AAA59836 Q31611
M32800 AAA59846 Q30182
U25971 AAA73518 Q29689
U36914 AAA80238 Q29724
U07161 AAA80569 P30443
U18930 AAA87076 P01892
U43334 AAA87570 Q29739
U43335 AAA87571 Q29740
U43336 AAA87572 Q29741
Q29920
U52429 AAB08574 P30450
U56825 AAB17465 P01892
U45480 AAB38491 P30450
U41057 AAB41292 P01891
M23739 AAB47873 P30512
Q6EXB0
U83415 AAB53373 P30512
Q6EXB0
L76936 AAB59614 Q29756
U50574 AAB60406 P13746
U32184 AAB63980 P04439
AF015930 AAB66582 P04439
AF008933 AAB66704 O19642
AF012766 AAB70187 O62891
O19520
AF012767 AAB70188 O62892
O19521
U03754 AAC04322 Q09160
U58024 AAC04369 O02926
O19658
O02928
O02923
O19659
O02927
Q95356
U58025 AAC04370 Q95347
O02924
O02929
O02925
U58026 AAC04371 Q95347
O02924
O02929
O02925
U58027 AAC04372 O02926
O19658
O02928
O02923
O19659
O02927
Q95356
U58028 AAC04373 O02926
O19658
O02928
O02923
O19659
O02927
Q95356
U58029 AAC04374 O02926
O19658
O02928
O02923
O19659
O02927
Q95356
U58094 AAC04375 Q95347
O02924
O02929
O02925
AF071017 AAC25569 O78133
O78134
O78131
AF071018 AAC25570 O78132
AF071019 AAC25571 O78133
O78134
O78131
AF071020 AAC25572 O78133
O78134
O78131
AF071021 AAC25573 O78135
O78136
AF071022 AAC25574 O78135
O78136
AF036921 AAD02067 Q9TQB6
AF116214 AAD05568 Q9TQ74
AF116215 AAD05569 Q9TQ73
AF140506 AAD32673 Q9TQ65
U88244 AAD45397 Q9UM45
AF165065 AAF25781 P13746
AF217561 AAF28734 P04439
AF226990 AAF37570 Q9MYA2
AF287958 AAG27625 Q9GJ45
AF287959 AAG27626 Q9GJ44
AF305699 AAG30922 Q9GJ24
BC003069 AAH03069 Q5SUL5
P30443
BC008611 AAH08611 P18462
BC019236 AAH19236 Q8WUX3
BC020891 AAH20891 Q8WW48
BC021708 AAH21708 Q8WLS1
AF436089 AAL30408 Q6B848
Q6B850
Q6B849
Q6B846
Q95HM6
Q6B847
Q6B851
AY191309 AAO20853 Q861F7
AY191310 AAO20854 Q861F6
AY225407 AAO43992 Q861E7
AY365426 AAQ64634 P01892
Q53Z42
AY359818 AAQ83724 Q6UV35
AY786585 AAV53343 Q5S3G3
P13746
AY786586 AAV53344 Q5S3G1
AY786587 AAV53345 Q5S3G1
AY856830 AAX51797 Q52YL7
DQ327718 ABC55710 Q2MJJ6
DQ327719 ABC55711 Q2MJJ5
DQ327720 ABC55712 Q5SPM2
DQ327721 ABC55713 Q5S3G3
DQ327722 ABC55714 Q95J06
DQ336693 ABC59610 Q2LC95
DQ336694 ABC59611 Q5S3G1
DQ336695 ABC59612 Q2LC93
DQ891760 ABM82686  
DQ896809 ABM87808  
EU176622 ABW03423  
EU176192 ABW03643  
D14350 BAA03279 P30450
D14351 BAA03280 P30450
D14354 BAA03282 P30450
D16841 BAA04117 Q5S3G3
P13746
D16842 BAA04118 P13746
D16843 BAA04119 Q5SPM2
P30450
D26550 BAA05549 Q29907
D32129 BAA06855 P30450
D32130 BAA06856 Q5SPM2
P30450
D32131 BAA06857 Q5SPM2
P30450
D38525 BAA07530 Q29757
D50068 BAA08783 P30450
D83515 BAA11935 P01892
AK056727 BAB71265 Q96MM2
AK125608 BAC86217 Q6ZUK5
AB209117 BAD92354 Q59GJ2
AK313119 BAG35940 B2R7U3
AK301014 BAG62631  
AK301019 BAG62636  
AK301282 BAG62841  
AK302054 BAG63444  
AK304472 BAG65286  
AJ000661 CAA04209 P30512
AJ001269 CAA04643 Q9MYF6
O19672
AJ001274 CAA04647 P01891
Q29741
Q29920
X02457 CAA26297 P01892
X13111 CAA31503 Q5S3G3
P13746
X13112 CAA31504 P13746
X17273 CAA35174 P17693
Q6DU14
X57954 CAA41022 P01892
X60108 CAA42702 P30512
X61700 CAA43869 P30455
X61703 CAA43872 P30456
X61704 CAA43873 P30453
X61711 CAA43880 P30457
X91399 CAA62745 O02968
P13746
X96638 CAA65442 Q95361
X96724 CAA65501 P01892
X97802 CAA66389 P18462
Y08275 CAA69599 O02968
Y11441 CAA72245 P79603
Y13028 CAA73473 O19671
Y13267 CAA73716 O02922
Z23071 CAA80612 P01892
Z27120 CAA81644 P01892
Z46633 CAA86602 P01892
Y17224 CAB38056 P13746
Y17224 CAB38057 P13746
X60764 CAB56609 Q8HX85
AJ249241 CAB56838 Q95J05
AJ290394 CAC27416 Q70I55
P30450
AJ580771 CAE45340 Q70I55
XM_001713645 XP_001713697  
XM_001716873 XP_001716925  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HLA-A NP_002107 R.norvegicus RT1-A2 24974   NP_001008829 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database

BioCarta Pathways
Pathway information courtesy of BioCarta

Kegg Pathways
Pathway information courtesy of Kegg


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