CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. RPL30, Ribosomal protein L30
Sequence ID:NM_000989

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 99123129 - 99125525

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5393199Full LengthBC032700ribosomal protein L30
30792764Full LengthBC095426ribosomal protein L30

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000980  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_000989 NP_000980 P62888 Ribosomal_L7Ae

Related Sequences

 
mRNAGenPeptSwissProt
L05095 AAC15858 P62888
BC032700 AAH32700 P62888
BC095426 AAH95426 P62888
D28438 BAA05804  
AK312102 BAG35038 B2R591
X79238 CAA55820 P62888

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL30 NP_000980 M.musculus Rpl30 19946 Gene Info NP_033109 100
M.musculus OTTMUSG00000005566 666899   XP_001000091 100
M.musculus EG667779 667779 Gene Info XP_997463 100
R.norvegicus Rpl30 64640   NP_073190 100
A.gambiae AgaP_AGAP003816 1271556   XP_310377 84
D.melanogaster RpL30 44059   NP_724149 81
A.thaliana AT1G36240 840530   NP_174853 72
C.elegans rpl-30 172921   NP_492728 72
S.pombe rpl30 2542661   NP_594857 70
M.grisea MGG_03135 2676713   XP_360592 69
N.crassa NCU08963.1 2713226   XP_331355 62
S.cerevisiae RPL30 852853   NP_011485 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

Kegg Pathways
Pathway information courtesy of Kegg


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.