CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. NCL, Nucleolin
Sequence ID:NM_005381

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q12-qterMitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 232027862 - 232037407

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2960982Full LengthBC002343nucleolin
2960982Full LengthBC006494nucleolin
2960982Full LengthBC006516nucleolin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005372  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_005381 NP_005372 P19338 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC002343 AAH02343 Q9BQ02
BC006494 AAH06494 Q9BQ02
BC006516 AAH06516 Q9BQ02
AK091742 BAC03738 P19338
AK127608 BAC87055 Q6ZS99
AK001314 BAG50892 B3KM80
AK095897 BAG53161 B3KTP9

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NCL NP_005372 R.norvegicus Ncl-ps1 64556   NP_072143 93
A.thaliana ATNUC-L1/PARL1 841314   NP_175322 38
M.grisea MGG_01268 2679652   XP_363342 37
N.crassa NCU03092.1 2712655   XP_330528 36
S.cerevisiae NSR1 853064   NP_011675 35
S.pombe gar2 2542869   NP_593531 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database

BioCarta Pathways
Pathway information courtesy of BioCarta


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.