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Gene Info

Gene Information For:Hs. CTDSP1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
Sequence ID:NM_021198
NM_182642

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 218975121 - 218978907

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3687816Full LengthBC012977CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067021  NP_872580  

Protein Infomation

RefSeq

mRNAProteinSwissProtEnzymePfam Motifs
NM_021198 NP_067021 Q9GZU7 EC 3.1.3.16 NIF
NM_182642 NP_872580 Q7Z5Q4   NIF

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF229162 AAG15402 Q9GZU7 EC 3.1.3.16
AF217969 AAG17212 Q9HBT0  
AF258582 AAG23785 Q9HBT0  
BC012977 AAH12977 Q9GZU7 EC 3.1.3.16
AY279529 AAP34397 Q7Z5Q4  
AY279530 AAP34398 Q7Z5Q3  
EU446878 ABZ92407    

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTDSP1 NP_067021 M.musculus Ctdsp1 227292 Gene Info NP_694728 99
R.norvegicus Ctdsp1 363249   XP_343589 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database


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