CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. NPEPPS, Aminopeptidase puromycin sensitive
Sequence ID:NM_006310

Database Links

UniGeneEntrez GeneOMIMSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 42963712 - 43055616

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6059589Full LengthBC065294aminopeptidase puromycin sensitive

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006301  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_006310 NP_006301 P55786 Peptidase_M1

Related Sequences

 
mRNAGenPeptSwissProt
BC065294 AAH65294 P55786
AK095877 BAG53154 B3KTP2
AK096709 BAG53355 B3KU93
AJ132583 CAA10709 P55786
XM_001725426 XP_001725478  
XM_001725441 XP_001725493  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NPEPPS NP_006301 M.musculus Npepps 19155 Gene Info NP_032968 98
R.norvegicus Npepps 50558   XP_340890 98
A.gambiae AgaP_AGAP005728 1276400   XP_556379 57
D.melanogaster Psa 38175   NP_728615 57
A.thaliana APM1 829446   NP_195035 47
C.elegans pam-1 177528   NP_001023210 40
M.grisea MGG_10606 2682253   XP_366388 38
S.pombe ape1 2540648   NP_595998 38
S.cerevisiae APE2 853699   NP_012765 37
N.crassa NCU09228.1 2713501   XP_331620 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.