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Gene Info

Gene Information For:Hs. SDCBP, Syndecan binding protein (syntenin)
Sequence ID:NM_005625
NM_001007069
NM_001007067
NM_001007070
NM_001007068

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 59628288 - 59657971

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322726Full LengthBC113674syndecan binding protein (syntenin)
8322728Full LengthBC113676syndecan binding protein (syntenin)
9052433Full LengthBC143915syndecan binding protein (syntenin)
9052434Full LengthBC143916syndecan binding protein (syntenin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001007068  NP_001007069  NP_001007070  NP_001007071  NP_005616  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_001007067 NP_001007068 O00560 PDZ
NM_001007068 NP_001007069   PDZ
NM_001007069 NP_001007070   PDZ
NM_001007070 NP_001007071   PDZ
NM_005625 NP_005616 O00560 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
U83463 AAB51246 O00560
AF000652 AAB97144 O00560
AF006636 AAC52050 O00560
BC113674 AAI13675 O00560
BC113676 AAI13677 O00560
AK312274 BAG35204 B2R5Q7
AK295198 BAG58197 B4DHN5
AK298697 BAG60855 B4DQ93
AK300647 BAG62335 B4DUH3

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SDCBP NP_001007068 R.norvegicus Sdcbp 83841   NP_114192 90
M.musculus Sdcbp 53378 Gene Info NP_058087 90
A.gambiae AgaP_AGAP009569 1278930   XP_318581 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database


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