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Gene Info

Gene Information For:Hs. TPM1, Tropomyosin 1 (alpha)
Sequence ID:NM_001018020
NM_001018007
NM_001018006
NM_001018004
NM_001018008
NM_000366
NM_001018005

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 61127651 - 61151164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2962925Full LengthBC007433tropomyosin 1 (alpha)
5730451Full LengthBC053545tropomyosin 1 (alpha)
5732846IncompleteBC050473tropomyosin 1 (alpha)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000357  NP_001018005  NP_001018006  NP_001018007  NP_001018008  NP_001018020  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_000366 NP_000357   Tropomyosin
NM_001018004 NP_001018004    
NM_001018005 NP_001018005 P09493 Tropomyosin
NM_001018006 NP_001018006   Tropomyosin
NM_001018007 NP_001018007 Q9Y427 Tropomyosin
NM_001018008 NP_001018008 Q7Z6L8 Tropomyosin
NM_001018020 NP_001018020   Tropomyosin

Related Sequences

 
mRNAGenPeptSwissProt
L02922 AAA16888 Q07413
L02923 AAA16889 Q07414
M19713 AAA61225 P09493
M19714 AAA61226 P09493
M19715 AAA61227 P09493
BC007433 AAH07433 P09493
BC050473 AAH50473 P09493
BC053545 AAH53545 Q7Z6L8
AF474156 AAL84569 Q8TCG4
AY640414 AAT68294 Q6DV90
AY640415 AAT68295 Q6DV89
DQ424903 ABD83668 Q1ZYL5
DQ893259 ABM84185  
DQ896588 ABM87587  
EU832801 ACE87812  
AK129882 BAC85248 Q6ZP76
AK131384 BAD18535 Q6ZN40
AB209041 BAD92278 Q59GR8
AJ000147 CAA03930 O15513
AJ001055 CAA04505 O15513
X12369 CAA30930 P09493
Z24727 CAA80853 Q15657
AL050179 CAB43309 Q9Y427

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TPM1 NP_001018020 R.norvegicus Tpm1 24851   NP_001029243 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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