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Gene Info

Gene Information For:Hs. PDCD6, Aryl-hydrocarbon receptor repressor
Sequence ID:NM_020731
NM_013232

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5p15.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 357290 - 491395

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3859672Full LengthBC012384programmed cell death 6
5187550Full LengthBC110291programmed cell death 6
40003290Full LengthBC106706programmed cell death 6
5744339IncompleteBC044220programmed cell death 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037364  NP_065782  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_013232 NP_037364 O75340 efhand
NM_020731 NP_065782   HLH
PAS

Related Sequences

 
mRNAGenPeptSwissProt
AF035606 AAC27697 O75340
U58773 AAF14336 O75340
BC012384 AAH12384 O75340
BC050597 AAH50597 Q86W51
BC106706 AAI06707 O75340
BC110291 AAI10292 Q2YDC2
BC151852 AAI51853 A9YTQ3
BC152406 AAI52407 A9YTQ3
BC160162 AAI60162  
BT020072 AAV38875 O75340
DQ891163 ABM82089  
DQ894344 ABM85270  
EU293605 ABX89616 A9YTQ3
AB033060 BAA86548 A9YTQ3
AK128087 BAC87267 Q6ZRP2
AK223366 BAD97086 Q53FC3
AK315370 BAG37763 B2RD16
AK295082 BAG58124 B4DHG2
XM_001714855 XP_001714907  
XM_001720072 XP_001720124  
XM_001723249 XP_001723301  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDCD6 NP_037364 M.musculus Pdcd6 18570 Gene Info NP_035181 99
R.norvegicus Pdcd6 308061   XP_217732 99
D.melanogaster Alg-2 3355106   NP_001104459 69
C.elegans M04F3.4 187448   NP_491447 60
M.grisea MGG_04818 2677750   XP_362372 44
N.crassa NCU02738.1 2713614   XP_331937 41
S.cerevisiae PEF1 852949   NP_011572 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)


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