CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Mm. -, RAS-related C3 botulinum substrate 1
Sequence ID:NM_009007

Database Links

UniGeneEntrez GeneSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5 82.0

Chromosomal Position (from UCSC)

Chromosomal Position:5: 144267556 - 144288861

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3593957Full LengthBC003828RAS-related C3 botulinum substrate 1
5038182Full LengthBC051053RAS-related C3 botulinum substrate 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033033  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_009007 NP_033033 P63001 Ras

Related Sequences

 
mRNAGenPeptSwissProt
U25107 AAB42023  
BC003828 AAH03828 P63001
BC051053 AAH51053 P63001
AK008435 BAB25667  
AK009017 BAB26027 P63001
AK011072 BAB69451 P63001
AK034601 BAC28767 P63001
AK047969 BAC33203 P63001
AK076023 BAC36128  
AK081613 BAC38272  
AK088825 BAC40596 P63001
AK166383 BAE38744 Q3TLP8
X57277 CAA40545 P63001

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rac1 NP_033033 H.sapiens RAC1 5879 Gene Info NP_061485 100
R.norvegicus Rac1 363875   NP_599193 100
D.melanogaster Rac2 38831   NP_648121 90
C.elegans ced-10 177111   NP_500363 83
N.crassa NCU02160.1 2711232   XP_329350 82
M.grisea MGG_02731 2682713   XP_366655 78
A.thaliana ARAC6/ATROP5/RAC2 829750   NP_195320 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.