CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Mm. Dynll1, Dynein light chain LC8-type 1
Sequence ID:NM_019682

Database Links

UniGeneEntrez GeneSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115748542 - 115750933

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3158148Full LengthBC008106dynein light chain LC8-type 1
3158148Full LengthBC034258dynein light chain LC8-type 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062656  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_019682 NP_062656   Dynein_light

Related Sequences

 
mRNAGenPeptSwissProt
AF020185 AAD01643 P63168
BC008106 AAH08106 P63168
BC034258 AAH34258 P63168
AK002522 BAB22160 P63168
AK010614 BAB27063 P63168
AK010685 BAB27117 P63168
AK013721 BAB28970 P63168
AK013725 BAB28973  
AK147977 BAE28262 P63168

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dynll1 NP_062656 R.norvegicus Dynll1 58945   NP_445771 99
H.sapiens DYNLL1 8655 Gene Info NP_003737 99
D.melanogaster Cdlc2 33319   NP_477408 93
C.elegans dlc-1 175922   NP_498422 91
P.falciparum PFL0660w 811185   XP_001350541 81
S.pombe dlc2 2543530   NP_594368 74
A.thaliana AT4G15930 827275   NP_193328 69
M.grisea MGG_01216 2679550   XP_363290 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.