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Best Gene for Tag

Search query:

Tag	Freq.	Digital Northern	SAGE Anatomic Viewer²
GCAAAAAAAA	87755	DN

Gene Symbol	Name	Database	Rank	Virtual Tag Classification¹	Accession	LT Viewer	Gene Info
RCE1	RCE1 homolog, prenyl protein peptidase (S. cerevisiae)	refseq_p5s	94.6%	reliable 3' end	NM_001032279	LTV	Gene Info

View all tags for gene

Other Gene(s) for Tag

Gene Symbol	Name	Database	Rank	Virtual Tag Classification¹	Accession	LT Viewer	Gene Info
AEBP1	AE binding protein 1	refseq_p5s	94.6%	reliable 3' end	NM_001129	LTV	Gene Info
IMP4	IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	refseq_p5s	94.6%	reliable 3' end	NM_033416	LTV	Gene Info
C8orf38	Chromosome 8 open reading frame 38	refseq_p5s	94.6%	reliable 3' end	NM_152416	LTV	Gene Info
PDE6D	Phosphodiesterase 6D, cGMP-specific, rod, delta	mgc_p5s	94.0%	reliable 3' end	BC007831	LTV	Gene Info
Hs.7917	HIG1 domain family, member 1A	mgc_p5s	94.0%	reliable 3' end	BC009594	LTV	Gene Info
PDXK	Pyridoxal (pyridoxine, vitamin B6) kinase	fl_p5s	92.6%	reliable 3' end	AK024977	LTV	Gene Info
KIAA0284	KIAA0284	fl_p5s	92.6%	reliable 3' end	AK025023	LTV	Gene Info
LOC100130815	Hypothetical protein LOC100130815	fl_p5s	92.6%	reliable 3' end	AL834311	LTV	Gene Info
Hs.385522	CDNA clone IMAGE:4831311	fl_p5s	92.6%	reliable 3' end	BC034625	LTV	Gene Info
Hs.595378	CDNA clone IMAGE:5314178	fl_p5s	92.6%	reliable 3' end	BC047111	LTV	Gene Info
Hs.677537	CDNA clone IMAGE:30339222	fl_p5s	92.6%	reliable 3' end	BC068584	LTV	Gene Info
CCBL2	Cysteine conjugate-beta lyase 2	mgc_p5r	91.6%	reliable 3' end	BC012942	LTV	Gene Info
Hs.612032	Clone HQ0290	fl_sr	89.2%	reliable 3' end	AF090913	LTV	Gene Info
Hs.684033	MRNA; cDNA DKFZp547P1417 (from clone DKFZp547P1417)	fl_p5r	86.6%	reliable 3' end	AL832555	LTV	Gene Info
SAGE1	Sarcoma antigen 1	refseq_p5s	74.7%	internal tag	NM_018666	LTV	Gene Info
YIF1B	Yip1 interacting factor homolog B (S. cerevisiae)	fl_r	67.3%	undefined 3' end	AY358965	LTV	Gene Info
Hs.129385	Transcribed locus	ug_p5s	66.9%	reliable 3' end			Gene Info
Hs.131282	Transcribed locus	ug_p5s	66.9%	reliable 3' end			Gene Info

Legend

¹	Position of virtual tag relative to the longest reliable sequence in database
²	Tissues only	Cell lines only	Tissues + Cell lines
*	Tag maps to other gene(s)
#	Highly repetitive tag