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Gene Info

Gene Information For:Hs. SMARCC2, Myosin, light chain 6, alkali, smooth muscle and non-muscle
Sequence ID:NM_021019
NM_079423

Database Links

UniGeneEntrez GeneCGWBOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54838412 - 54841625

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3538373Full LengthBC017455myosin, light chain 6, alkali, smooth muscle and non-muscle
5561575Full LengthBC071661myosin, light chain 6, alkali, smooth muscle and non-muscle
30722094Full LengthBC093066myosin, light chain 6, alkali, smooth muscle and non-muscle
2900273IncompleteBC006781myosin, light chain 6, alkali, smooth muscle and non-muscle

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066299  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_001130420 NP_001123892    
NM_003075 NP_003066 Q8TAQ2 Myb_DNA-binding
SWIRM
NM_021019 NP_066299 P60660 efhand
NM_079423 NP_524147 Q6IBG5  
NM_139067 NP_620706    

Related Sequences

 
mRNAGenPeptSwissProt
U02629 AAA20643 P60660
M22918 AAA36347 Q6IBG5
P60660
M22920 AAA36348 P60660
M31212 AAA59853 P60660
U66616 AAC50694 Q8TAQ2
BC006781 AAH06781 Q561V9
P60660
BC009067 AAH09067 Q8TAQ2
BC013045 AAH13045 Q8TAQ2
BC017455 AAH17455 P60660
BC026222 AAH26222 Q8TAQ2
BC071661 AAH71661 Q561V9
P60660
BC093066 AAH93066 Q561V9
BT009924 AAP88926 Q8TAQ2
EU176256 ABW03707  
EU832066 ACE86728  
EU831973 ACE87414  
AB046613 BAB62402 P60660
AB209006 BAD92243 Q59GV3
AB209293 BAD92530 Q59G16
AK293896 BAG57283 B4DF22
CR456839 CAG33120 Q6IBG5
CR457014 CAG33295 P60660

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene		 Gene Info Protein
H.sapiens MYL6 NP_524147 M.musculus Myl6 17904 Gene Info NP_034990 100
R.norvegicus Myl6 685867   XP_001065562 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

Kegg Pathways
Pathway information courtesy of Kegg

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