CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. -, Ribosomal protein L15
Sequence ID:NM_002948

Database Links

UniGeneEntrez GeneOMIMDTPSNPViewerAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 23933653 - 23937334

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2901238Full LengthBC014837ribosomal protein L15
4093343Full LengthBC068198ribosomal protein L15
4390593Full LengthBC071672ribosomal protein L15
5458912Full LengthBC081565ribosomal protein L15
30371842Full LengthBC070328ribosomal protein L15
3961042IncompleteBC030575ribosomal protein L15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002939  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_002948 NP_002939 P61313
Q5U0C0
Ribosomal_L15e

Related Sequences

 
mRNAGenPeptSwissProt
L25899 AAA36583 P61313
AF283772 AAG15591 P61313
Q5U0C0
AF279903 AAG44837 P61313
BC014837 AAH14837 P61313
BC030575 AAH30575 Q8N6E1
BC068198 AAH68198 P61313
Q5U0C0
BC070328 AAH70328 P61313
Q5U0C0
BC071672 AAH71672 P61313
Q5U0C0
BC081565 AAH81565 Q642I1
AY347528 AAQ24859 P61313
Q5U0C0
BT019672 AAV38478 P61313
Q5U0C0
AK290694 BAF83383 Q5U0C0
AK292000 BAF84689 Q5U0C0
AK293709 BAG57142 B4DEN1
AK297091 BAG59606 B4DLP4

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL15 NP_002939 M.musculus 100043209 100043209   XP_001480343 100
R.norvegicus Rpl15 245981   NP_620814 100
C.elegans rpl-15 176891   NP_499964 76
A.gambiae AgaP_AGAP004919 1275723   XP_557554 74
D.melanogaster RpL15 3354918   NP_001104430 74
N.crassa NCU01776.1 2709947   XP_328215 73
S.cerevisiae RPL15A 850716   NP_013129 72
S.pombe rpl15-2 2542370   NP_593663 72
M.grisea MGG_11785 5049572   XP_001406316 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

Kegg Pathways
Pathway information courtesy of Kegg


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.