CGAP       the Cancer Genome Anatomy Project
    CGAP HOW TO GenesChromosomesTissuesSAGEPathwaysTools  

Genes

Gene Tools

SNP Tools

Transcriptome Analysis

CGAP Data

Purchase CGAP Reagents

Related Links

Quick Links:

NCI Logo


Gene Info

Gene Information For:Hs. ATP5L, ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G
Sequence ID:NM_006476

Database Links

UniGeneEntrez GeneSNPViewerAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 117777530 - 117785118

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3930553Full LengthBC015128ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G
6714804Full LengthBC070165ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006467  

Protein Infomation

RefSeq

mRNAProteinSwissProtPfam Motifs
NM_006476 NP_006467 O75964 ATP-synt_G

Related Sequences

 
mRNAGenPeptSwissProt
AF092124 AAC61597 O75964
AF070655 AAD20961 O75964
BC015128 AAH15128 O75964
BC070165 AAH70165 O75964
AF087846 AAP97159 O75964
AK289568 BAF82257 A8K0K3
AL050277 CAB43378 O75964
CR533494 CAG38525 O75964
CR542211 CAG47007 O75964
AM393064 CAL37942  
AM393513 CAL38390  

Homologs (from HomoloGene)

Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP5L NP_006467 M.musculus Atp5l 27425 Gene Info NP_038823 83
M.musculus ENSMUSG00000067719 100042348   XP_001478505 83
M.musculus OTTMUSG00000002778 100040708 Gene Info XP_001476376 81
R.norvegicus Atp5l 300677   NP_997681 79
M.musculus EG227112 227112   XP_892244 78
M.musculus EG627998 627998   XP_897809 78
D.melanogaster l(2)06225 46069   NP_001036353 55
A.gambiae AgaP_AGAP009491 1271420   XP_310207 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

Kegg Pathways
Pathway information courtesy of Kegg


If you have any questions, comments, or need information about CGAP, please contact the NCI CGAP Help Desk.